Gene annotation
Transcriptome id Sobic.001G224900.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QKC1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g32930.1 : expressed protein
MaizeGDB (Corn) Zm00025a017665
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G175500 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed -
2 Sobic.002G137100 protein kinase family protein, putative, expressed -
3 Sobic.001G068301 - K16189: phytochrome-interacting factor 4
4 Sobic.001G048000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.005G110532 - -
6 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
7 Sobic.003G014300 expressed protein -
8 Sobic.001G003200 RNApolymerase sigma-subunit F(PubMedID : 26465154)@RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
9 Sobic.002G390500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pyruvate dehydrogenase kinase(PubMedID : 27016024)@kinase, putative, expressed K00898: pyruvate dehydrogenase kinase 2/3/4
10 Sobic.004G210900 auxin efflux carrier component, putative, expressed -
11 Sobic.006G123500 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
12 Sobic.008G146900 "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed -
13 Sobic.004G183800 AAA family ATPase, putative, expressed K03544: clpX, ATP-dependent Clp protease ATP-binding subunit ClpX
14 Sobic.008G004700 NC domain-containing protein, putative, expressed -
15 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
16 Sobic.004G099700 receptor-like protein kinase 5 precursor, putative, expressed -
17 Sobic.006G188000 expressed protein -
18 Sobic.006G164300 YELLOW STRIPE like 2(PubMedID : 26465154)@- -
19 Sobic.003G292600 HPT phosphotransmitter 4(PubMedID : 26465154)@Positive cytokinine regulator(PubMedID : 30367619)@histidine-containing phosphotransfer protein, putative, expressed K14490: histidine-containing phosphotransfer peotein
20 Sobic.003G343500 NADH-ubiquinone oxidoreductase, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)


Gene co-expression network
sample Sobic001G224900 Sobic001G224900 Sobic005G175500 Sobic005G175500 Sobic001G224900--Sobic005G175500 Sobic002G137100 Sobic002G137100 Sobic001G224900--Sobic002G137100 Sobic001G068301 Sobic001G068301 Sobic001G224900--Sobic001G068301 Sobic001G048000 Sobic001G048000 Sobic001G224900--Sobic001G048000 Sobic005G110532 Sobic005G110532 Sobic001G224900--Sobic005G110532 Sobic006G258700 Sobic006G258700 Sobic001G224900--Sobic006G258700 Sobic003G014300 Sobic003G014300 Sobic001G224900--Sobic003G014300 Sobic001G003200 Sobic001G003200 Sobic001G224900--Sobic001G003200 Sobic002G390500 Sobic002G390500 Sobic001G224900--Sobic002G390500 Sobic005G175500--Sobic003G014300 Sobic005G175500--Sobic006G258700 Sobic005G175600 Sobic005G175600 Sobic005G175500--Sobic005G175600 Sobic004G300000 Sobic004G300000 Sobic005G175500--Sobic004G300000 Sobic006G060601 Sobic006G060601 Sobic005G175500--Sobic006G060601 Sobic005G175500--Sobic001G224900 Sobic001G404500 Sobic001G404500 Sobic005G175500--Sobic001G404500 Sobic009G019100 Sobic009G019100 Sobic005G175500--Sobic009G019100 Sobic010G207500 Sobic010G207500 Sobic005G175500--Sobic010G207500 Sobic002G137100--Sobic001G224900 Sobic002G137100--Sobic005G175500 Sobic002G137100--Sobic001G048000 Sobic002G137100--Sobic010G207500 Sobic008G146900 Sobic008G146900 Sobic002G137100--Sobic008G146900 Sobic002G137100--Sobic005G175600 Sobic002G137100--Sobic006G060601 Sobic008G004700 Sobic008G004700 Sobic002G137100--Sobic008G004700 Sobic002G046900 Sobic002G046900 Sobic002G137100--Sobic002G046900 Sobic004G122200 Sobic004G122200 Sobic001G068301--Sobic004G122200 Sobic010G225600 Sobic010G225600 Sobic001G068301--Sobic010G225600 Sobic005G097800 Sobic005G097800 Sobic001G068301--Sobic005G097800 Sobic003G292600 Sobic003G292600 Sobic001G068301--Sobic003G292600 Sobic001G068301--Sobic001G224900 Sobic001G068301--Sobic001G048000 Sobic006G135100 Sobic006G135100 Sobic001G068301--Sobic006G135100 Sobic002G286400 Sobic002G286400 Sobic001G068301--Sobic002G286400 Sobic005G055900 Sobic005G055900 Sobic001G068301--Sobic005G055900 Sobic001G525900 Sobic001G525900 Sobic001G048000--Sobic001G525900 Sobic002G281000 Sobic002G281000 Sobic001G048000--Sobic002G281000 Sobic001G048000--Sobic001G404500 Sobic001G048000--Sobic005G175600 Sobic002G366100 Sobic002G366100 Sobic001G048000--Sobic002G366100 Sobic001G048000--Sobic003G292600 Sobic001G005500 Sobic001G005500 Sobic001G048000--Sobic001G005500 Sobic005G127000 Sobic005G127000 Sobic001G048000--Sobic005G127000 Sobic002G195700 Sobic002G195700 Sobic001G048000--Sobic002G195700 Sobic005G110532--Sobic004G300000 Sobic006G030400 Sobic006G030400 Sobic005G110532--Sobic006G030400 Sobic010G197000 Sobic010G197000 Sobic005G110532--Sobic010G197000 Sobic002G173100 Sobic002G173100 Sobic005G110532--Sobic002G173100 Sobic010G049000 Sobic010G049000 Sobic005G110532--Sobic010G049000 Sobic005G110532--Sobic001G003200 Sobic003G108900 Sobic003G108900 Sobic005G110532--Sobic003G108900 Sobic009G014100 Sobic009G014100 Sobic005G110532--Sobic009G014100 Sobic005G110532--Sobic003G014300 Sobic006G258700--Sobic003G014300 Sobic010G269400 Sobic010G269400 Sobic006G258700--Sobic010G269400 Sobic004G298900 Sobic004G298900 Sobic006G258700--Sobic004G298900 Sobic001G351400 Sobic001G351400 Sobic006G258700--Sobic001G351400 Sobic003G037300 Sobic003G037300 Sobic006G258700--Sobic003G037300 Sobic010G189200 Sobic010G189200 Sobic006G258700--Sobic010G189200 Sobic006G258700--Sobic004G300000 Sobic001G286600 Sobic001G286600 Sobic006G258700--Sobic001G286600 Sobic006G258700--Sobic001G404500 Sobic003G014300--Sobic006G258700 Sobic003G014300--Sobic004G298900 Sobic003G014300--Sobic010G269400 Sobic003G014300--Sobic004G300000 Sobic003G014300--Sobic003G037300 Sobic001G512500 Sobic001G512500 Sobic003G014300--Sobic001G512500 Sobic003G014300--Sobic005G175500 Sobic010G035500 Sobic010G035500 Sobic003G014300--Sobic010G035500 Sobic004G151500 Sobic004G151500 Sobic003G014300--Sobic004G151500 Sobic009G056700 Sobic009G056700 Sobic001G003200--Sobic009G056700 Sobic007G053800 Sobic007G053800 Sobic001G003200--Sobic007G053800 Sobic004G121400 Sobic004G121400 Sobic001G003200--Sobic004G121400 Sobic007G150100 Sobic007G150100 Sobic001G003200--Sobic007G150100 Sobic006G188000 Sobic006G188000 Sobic001G003200--Sobic006G188000 Sobic003G398800 Sobic003G398800 Sobic001G003200--Sobic003G398800 Sobic001G048400 Sobic001G048400 Sobic001G003200--Sobic001G048400 Sobic003G431700 Sobic003G431700 Sobic001G003200--Sobic003G431700 Sobic001G504400 Sobic001G504400 Sobic001G003200--Sobic001G504400 Sobic002G412100 Sobic002G412100 Sobic002G390500--Sobic002G412100 Sobic009G219100 Sobic009G219100 Sobic002G390500--Sobic009G219100 Sobic005G179300 Sobic005G179300 Sobic002G390500--Sobic005G179300 Sobic003G343500 Sobic003G343500 Sobic002G390500--Sobic003G343500 Sobic001G333800 Sobic001G333800 Sobic002G390500--Sobic001G333800 Sobic010G181100 Sobic010G181100 Sobic002G390500--Sobic010G181100 Sobic006G259600 Sobic006G259600 Sobic002G390500--Sobic006G259600 Sobic003G080700 Sobic003G080700 Sobic002G390500--Sobic003G080700 Sobic002G390500--Sobic001G003200
Octagon: transcription factors


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