Gene annotation
Transcriptome id Sobic.001G233800.2,Sobic.001G233800.1
Synonym Sb01g020490
Functional annotation expressed protein
UniProt C5X0C9
Pfam PF08879
Panther DB PTHR34680
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g30890.1 : expressed protein
MaizeGDB (Corn) Zm00025a006760 , Zm00025a006759
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G231700 LSM domain containing protein, expressed K12626: U6 snRNA-associated Sm-like protein LSm7
2 Sobic.002G378401 - -
3 Sobic.005G206700 WD domain, G-beta repeat domain containing protein, expressed K12602: WDR61, REC14, WD repeat-containing protein 61
4 Sobic.006G013900 RNA polymerase subunit, putative, expressed K03008: RPB11, DNA-directed RNA polymerase II subunit RPB11
5 Sobic.001G094500 tentative name(PubMedID : 31536532)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
6 Sobic.003G367900 LSM domain containing protein, expressed K12622: U6 snRNA-associated Sm-like protein LSm3
7 Sobic.004G137900 wiskott-Aldrich syndrome protein family member 2, putative, expressed -
8 Sobic.002G051200 PHF5-like protein domain containing protein, expressed K12834: PHD finger-like domain-containing protein 5A
9 Sobic.002G359900 nuclear transport factor 2, putative, expressed -
10 Sobic.001G544100 peptidyl-prolyl cis-trans isomerase, cyclophilin type, putative, expressed -
11 Sobic.003G424800 MKI67 FHA domain-interacting nucleolar phosphoprotein(PubMedID : 24906815)@RNA recognition motif containing protein, putative, expressed K14838: nucleolar protein 15
12 Sobic.003G434000 expressed protein K06170: PSENEN, presenilin enhancer 2
13 Sobic.004G343600 3-5 exoribonuclease CSL4, putative, expressed K07573: CSL4, exosome complex component CSL4
14 Sobic.002G331300 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e
15 Sobic.007G163700 zinc finger protein 593, putative, expressed K14821: bud site selection protein 20
16 Sobic.004G175700 tetratricopeptide repeat domain containing protein, expressed -
17 Sobic.008G098800 40S ribosomal protein S6, putative, expressed K02991: RP-S6e, small subunit ribosomal protein S6e
18 Sobic.004G012800 DNA-directed RNA polymerase II subunit RPB4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
19 Sobic.001G404100 expressed protein K03237: translation initiation factor 2 subunit 1
20 Sobic.009G231900 expressed protein -


Gene co-expression network
sample Sobic001G233800 Sobic001G233800 Sobic006G231700 Sobic006G231700 Sobic001G233800--Sobic006G231700 Sobic002G378401 Sobic002G378401 Sobic001G233800--Sobic002G378401 Sobic005G206700 Sobic005G206700 Sobic001G233800--Sobic005G206700 Sobic006G013900 Sobic006G013900 Sobic001G233800--Sobic006G013900 Sobic001G094500 Sobic001G094500 Sobic001G233800--Sobic001G094500 Sobic003G367900 Sobic003G367900 Sobic001G233800--Sobic003G367900 Sobic004G137900 Sobic004G137900 Sobic001G233800--Sobic004G137900 Sobic002G051200 Sobic002G051200 Sobic001G233800--Sobic002G051200 Sobic002G359900 Sobic002G359900 Sobic001G233800--Sobic002G359900 Sobic005G111100 Sobic005G111100 Sobic006G231700--Sobic005G111100 Sobic007G163700 Sobic007G163700 Sobic006G231700--Sobic007G163700 Sobic006G231700--Sobic001G094500 Sobic006G231700--Sobic006G013900 Sobic003G358300 Sobic003G358300 Sobic006G231700--Sobic003G358300 Sobic001G128400 Sobic001G128400 Sobic006G231700--Sobic001G128400 Sobic003G129800 Sobic003G129800 Sobic006G231700--Sobic003G129800 Sobic001G517600 Sobic001G517600 Sobic006G231700--Sobic001G517600 Sobic006G231700--Sobic004G137900 Sobic003G127700 Sobic003G127700 Sobic002G378401--Sobic003G127700 Sobic003G024500 Sobic003G024500 Sobic002G378401--Sobic003G024500 Sobic009G149800 Sobic009G149800 Sobic002G378401--Sobic009G149800 Sobic007G068000 Sobic007G068000 Sobic002G378401--Sobic007G068000 Sobic002G116200 Sobic002G116200 Sobic002G378401--Sobic002G116200 Sobic002G378401--Sobic001G233800 Sobic003G150000 Sobic003G150000 Sobic002G378401--Sobic003G150000 Sobic002G378401--Sobic006G231700 Sobic001G225700 Sobic001G225700 Sobic002G378401--Sobic001G225700 Sobic005G206700--Sobic006G231700 Sobic005G206700--Sobic006G013900 Sobic005G206700--Sobic004G137900 Sobic010G054200 Sobic010G054200 Sobic005G206700--Sobic010G054200 Sobic004G063500 Sobic004G063500 Sobic005G206700--Sobic004G063500 Sobic005G206700--Sobic001G233800 Sobic007G152400 Sobic007G152400 Sobic005G206700--Sobic007G152400 Sobic009G120100 Sobic009G120100 Sobic005G206700--Sobic009G120100 Sobic002G331300 Sobic002G331300 Sobic005G206700--Sobic002G331300 Sobic006G013900--Sobic006G231700 Sobic006G013900--Sobic002G051200 Sobic001G162800 Sobic001G162800 Sobic006G013900--Sobic001G162800 Sobic006G013900--Sobic004G137900 Sobic001G154400 Sobic001G154400 Sobic006G013900--Sobic001G154400 Sobic004G343600 Sobic004G343600 Sobic006G013900--Sobic004G343600 Sobic006G013900--Sobic002G331300 Sobic006G013900--Sobic005G206700 Sobic002G386300 Sobic002G386300 Sobic006G013900--Sobic002G386300 Sobic001G094500--Sobic006G231700 Sobic001G094500--Sobic001G128400 Sobic001G094500--Sobic005G111100 Sobic004G265700 Sobic004G265700 Sobic001G094500--Sobic004G265700 Sobic002G279000 Sobic002G279000 Sobic001G094500--Sobic002G279000 Sobic001G532100 Sobic001G532100 Sobic001G094500--Sobic001G532100 Sobic001G094500--Sobic007G152400 Sobic001G529000 Sobic001G529000 Sobic001G094500--Sobic001G529000 Sobic001G094500--Sobic007G163700 Sobic001G404100 Sobic001G404100 Sobic003G367900--Sobic001G404100 Sobic006G052400 Sobic006G052400 Sobic003G367900--Sobic006G052400 Sobic001G096100 Sobic001G096100 Sobic003G367900--Sobic001G096100 Sobic006G281200 Sobic006G281200 Sobic003G367900--Sobic006G281200 Sobic003G367900--Sobic003G127700 Sobic003G367900--Sobic002G331300 Sobic004G175700 Sobic004G175700 Sobic003G367900--Sobic004G175700 Sobic009G258600 Sobic009G258600 Sobic003G367900--Sobic009G258600 Sobic008G100000 Sobic008G100000 Sobic003G367900--Sobic008G100000 Sobic004G012800 Sobic004G012800 Sobic004G137900--Sobic004G012800 Sobic004G137900--Sobic006G231700 Sobic004G137900--Sobic003G358300 Sobic004G137900--Sobic006G013900 Sobic004G137900--Sobic002G331300 Sobic001G286300 Sobic001G286300 Sobic004G137900--Sobic001G286300 Sobic004G137900--Sobic009G120100 Sobic004G137900--Sobic003G129800 Sobic004G137900--Sobic005G111100 Sobic002G051200--Sobic006G013900 Sobic002G051200--Sobic006G231700 Sobic010G256200 Sobic010G256200 Sobic002G051200--Sobic010G256200 Sobic002G051200--Sobic001G154400 Sobic001G349400 Sobic001G349400 Sobic002G051200--Sobic001G349400 Sobic002G051200--Sobic003G358300 Sobic003G434000 Sobic003G434000 Sobic002G051200--Sobic003G434000 Sobic002G051200--Sobic004G137900 Sobic009G052500 Sobic009G052500 Sobic002G051200--Sobic009G052500 Sobic010G253100 Sobic010G253100 Sobic002G359900--Sobic010G253100 Sobic003G436500 Sobic003G436500 Sobic002G359900--Sobic003G436500 Sobic006G261100 Sobic006G261100 Sobic002G359900--Sobic006G261100 Sobic006G120800 Sobic006G120800 Sobic002G359900--Sobic006G120800 Sobic003G031200 Sobic003G031200 Sobic002G359900--Sobic003G031200 Sobic001G458200 Sobic001G458200 Sobic002G359900--Sobic001G458200 Sobic002G403200 Sobic002G403200 Sobic002G359900--Sobic002G403200 Sobic001G038100 Sobic001G038100 Sobic002G359900--Sobic001G038100 Sobic002G204000 Sobic002G204000 Sobic002G359900--Sobic002G204000
Octagon: transcription factors


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