Gene annotation
Transcriptome id Sobic.001G321100.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QMA4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g37860.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G321100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G279900 RING finger protein 13, putative, expressed K15692: RNF13, E3 ubiquitin-protein ligase RNF13
2 Sobic.004G357800 phospholipase A2, putative, expressed -
3 Sobic.003G211700 expressed protein -
4 Sobic.007G003600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@cytochrome P450, putative, expressed -
5 Sobic.006G252400 S4 domain containing protein, putative, expressed K14560: U3 small nucleolar ribonucleoprotein protein IMP3
6 Sobic.004G164000 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
7 Sobic.004G016100 expressed protein -
8 Sobic.003G346100 expressed protein -
9 Sobic.003G137400 OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
10 Sobic.003G131300 glycosyl hydrolases family 17 protein, putative, expressed -
11 Sobic.004G224800 ubiquitin-conjugating enzyme, putative, expressed K10689: peroxin-4
12 Sobic.010G167601 - -
13 Sobic.001G281700 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
14 Sobic.001G518500 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
15 Sobic.002G189900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.010G235000 external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor, putative, expressed K17871: NADH:ubiquinone reductase (non-electrogenic)
17 Sobic.003G167000 protein phosphotase protein, putative, expressed -
18 Sobic.004G339400 expressed protein -
19 Sobic.004G030000 mitochondrial ATP synthase precursor, putative, expressed -
20 Sobic.009G112900 expressed protein K18170: LYRM7, complex III assembly factor LYRM7


Gene co-expression network
sample Sobic001G321100 Sobic001G321100 Sobic006G279900 Sobic006G279900 Sobic001G321100--Sobic006G279900 Sobic004G357800 Sobic004G357800 Sobic001G321100--Sobic004G357800 Sobic003G211700 Sobic003G211700 Sobic001G321100--Sobic003G211700 Sobic007G003600 Sobic007G003600 Sobic001G321100--Sobic007G003600 Sobic006G252400 Sobic006G252400 Sobic001G321100--Sobic006G252400 Sobic004G164000 Sobic004G164000 Sobic001G321100--Sobic004G164000 Sobic004G016100 Sobic004G016100 Sobic001G321100--Sobic004G016100 Sobic003G346100 Sobic003G346100 Sobic001G321100--Sobic003G346100 Sobic003G137400 Sobic003G137400 Sobic001G321100--Sobic003G137400 Sobic008G008400 Sobic008G008400 Sobic006G279900--Sobic008G008400 Sobic003G151300 Sobic003G151300 Sobic006G279900--Sobic003G151300 Sobic006G213100 Sobic006G213100 Sobic006G279900--Sobic006G213100 Sobic010G046400 Sobic010G046400 Sobic006G279900--Sobic010G046400 Sobic004G232000 Sobic004G232000 Sobic006G279900--Sobic004G232000 Sobic003G128000 Sobic003G128000 Sobic006G279900--Sobic003G128000 Sobic006G279900--Sobic007G003600 Sobic006G100000 Sobic006G100000 Sobic006G279900--Sobic006G100000 Sobic003G229400 Sobic003G229400 Sobic006G279900--Sobic003G229400 Sobic003G218400 Sobic003G218400 Sobic004G357800--Sobic003G218400 Sobic001G031800 Sobic001G031800 Sobic004G357800--Sobic001G031800 Sobic007G013900 Sobic007G013900 Sobic004G357800--Sobic007G013900 Sobic007G141100 Sobic007G141100 Sobic004G357800--Sobic007G141100 Sobic010G007400 Sobic010G007400 Sobic004G357800--Sobic010G007400 Sobic009G215300 Sobic009G215300 Sobic004G357800--Sobic009G215300 Sobic008G136800 Sobic008G136800 Sobic004G357800--Sobic008G136800 Sobic001G060300 Sobic001G060300 Sobic004G357800--Sobic001G060300 Sobic001G031900 Sobic001G031900 Sobic004G357800--Sobic001G031900 Sobic007G115900 Sobic007G115900 Sobic003G211700--Sobic007G115900 Sobic004G316800 Sobic004G316800 Sobic003G211700--Sobic004G316800 Sobic007G053400 Sobic007G053400 Sobic003G211700--Sobic007G053400 Sobic007G158900 Sobic007G158900 Sobic003G211700--Sobic007G158900 Sobic003G113400 Sobic003G113400 Sobic003G211700--Sobic003G113400 Sobic007G212800 Sobic007G212800 Sobic003G211700--Sobic007G212800 Sobic005G178950 Sobic005G178950 Sobic003G211700--Sobic005G178950 Sobic010G048900 Sobic010G048900 Sobic003G211700--Sobic010G048900 Sobic003G131300 Sobic003G131300 Sobic003G211700--Sobic003G131300 Sobic007G003600--Sobic006G279900 Sobic003G073300 Sobic003G073300 Sobic007G003600--Sobic003G073300 Sobic007G003600--Sobic001G321100 Sobic005G020400 Sobic005G020400 Sobic007G003600--Sobic005G020400 Sobic005G054700 Sobic005G054700 Sobic007G003600--Sobic005G054700 Sobic001G362500 Sobic001G362500 Sobic007G003600--Sobic001G362500 Sobic007G003600--Sobic003G229400 Sobic009G013800 Sobic009G013800 Sobic007G003600--Sobic009G013800 Sobic004G220300 Sobic004G220300 Sobic007G003600--Sobic004G220300 Sobic003G005100 Sobic003G005100 Sobic006G252400--Sobic003G005100 Sobic004G127300 Sobic004G127300 Sobic006G252400--Sobic004G127300 Sobic007G192400 Sobic007G192400 Sobic006G252400--Sobic007G192400 Sobic002G113200 Sobic002G113200 Sobic006G252400--Sobic002G113200 Sobic004G259300 Sobic004G259300 Sobic006G252400--Sobic004G259300 Sobic003G213000 Sobic003G213000 Sobic006G252400--Sobic003G213000 Sobic007G184800 Sobic007G184800 Sobic006G252400--Sobic007G184800 Sobic008G036600 Sobic008G036600 Sobic006G252400--Sobic008G036600 Sobic010G260900 Sobic010G260900 Sobic006G252400--Sobic010G260900 Sobic004G164000--Sobic003G131300 Sobic007G019501 Sobic007G019501 Sobic004G164000--Sobic007G019501 Sobic009G001900 Sobic009G001900 Sobic004G164000--Sobic009G001900 Sobic004G159000 Sobic004G159000 Sobic004G164000--Sobic004G159000 Sobic002G090700 Sobic002G090700 Sobic004G164000--Sobic002G090700 Sobic001G392800 Sobic001G392800 Sobic004G164000--Sobic001G392800 Sobic001G309500 Sobic001G309500 Sobic004G164000--Sobic001G309500 Sobic004G164000--Sobic008G136800 Sobic008G025700 Sobic008G025700 Sobic004G164000--Sobic008G025700 Sobic007G077532 Sobic007G077532 Sobic004G016100--Sobic007G077532 Sobic004G016100--Sobic004G259300 Sobic007G177500 Sobic007G177500 Sobic004G016100--Sobic007G177500 Sobic004G141400 Sobic004G141400 Sobic004G016100--Sobic004G141400 Sobic005G170000 Sobic005G170000 Sobic004G016100--Sobic005G170000 Sobic004G016100--Sobic007G192400 Sobic003G402900 Sobic003G402900 Sobic004G016100--Sobic003G402900 Sobic009G228400 Sobic009G228400 Sobic004G016100--Sobic009G228400 Sobic004G218300 Sobic004G218300 Sobic004G016100--Sobic004G218300 Sobic003G116600 Sobic003G116600 Sobic003G346100--Sobic003G116600 Sobic002G368400 Sobic002G368400 Sobic003G346100--Sobic002G368400 Sobic008G165000 Sobic008G165000 Sobic003G346100--Sobic008G165000 Sobic003G332401 Sobic003G332401 Sobic003G346100--Sobic003G332401 Sobic003G311700 Sobic003G311700 Sobic003G346100--Sobic003G311700 Sobic010G217200 Sobic010G217200 Sobic003G346100--Sobic010G217200 Sobic006G254600 Sobic006G254600 Sobic003G346100--Sobic006G254600 Sobic001G522900 Sobic001G522900 Sobic003G346100--Sobic001G522900 Sobic001G013200 Sobic001G013200 Sobic003G346100--Sobic001G013200 Sobic003G273100 Sobic003G273100 Sobic003G137400--Sobic003G273100 Sobic008G106800 Sobic008G106800 Sobic003G137400--Sobic008G106800 Sobic004G231400 Sobic004G231400 Sobic003G137400--Sobic004G231400 Sobic004G274700 Sobic004G274700 Sobic003G137400--Sobic004G274700 Sobic001G149700 Sobic001G149700 Sobic003G137400--Sobic001G149700 Sobic001G478300 Sobic001G478300 Sobic003G137400--Sobic001G478300 Sobic006G088100 Sobic006G088100 Sobic003G137400--Sobic006G088100 Sobic010G209501 Sobic010G209501 Sobic003G137400--Sobic010G209501 Sobic005G012000 Sobic005G012000 Sobic003G137400--Sobic005G012000
Octagon: transcription factors


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