Gene annotation
Transcriptome id Sobic.010G235000.1
Synonym Sb10g027690, NDB1
Functional annotation external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor, putative, expressed
UniProt C5Z889
Pfam PF00070
Panther DB PTHR22912
NCBI CDD -
KEGG Orthology K17871; NADH:ubiquinone reductase (non-electrogenic)
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G28220 : NAD(P)H dehydrogenase B1
RAP-DB (Rice) LOC_Os06g47000.2 : external NADH-ubiquinone oxidoreductase 1, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a041853 , Zm00025a057111 , Zm00025a057110
Brachypodium KQK17215
Barley HORVU7Hr1G101500.4 , HORVU7Hr1G101500.5 , HORVU7Hr1G101500.6 , HORVU7Hr1G101500.1 , HORVU7Hr1G101500.2 , HORVU7Hr1G101500.3
Wheat TraesCS7D02G438100 , TraesCS7D02G438100 , TraesCS7D02G438100 , TraesCS7B02G348600 , TraesCS7B02G348600 , TraesCS7A02G448800 , TraesCS7A02G448800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G014300 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
2 Sobic.006G203900 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
3 Sobic.009G112900 expressed protein K18170: LYRM7, complex III assembly factor LYRM7
4 Sobic.001G013200 actin-related protein 2/3 complex subunit 4, putative, expressed K05755: actin related protein 2/3 complex, subunit 4
5 Sobic.004G232700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@wound/stress protein, putative, expressed -
6 Sobic.002G342000 protein phosphatase 2C, putative, expressed -
7 Sobic.008G136800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17777: mitochondrial import inner membrane translocase subunit TIM9
8 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
9 Sobic.001G518500 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
10 Sobic.001G543400 phosphoglycerate mutase, putative, expressed -
11 Sobic.002G401700 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
12 Sobic.003G016300 SFT2, putative, expressed -
13 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
14 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
15 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit
16 Sobic.003G274200 5-nucleotidase surE, putative, expressed K03787: 5'-nucleotidase
17 Sobic.007G141100 expressed protein K18179: cytochrome c oxidase assembly factor 6
18 Sobic.003G167000 protein phosphotase protein, putative, expressed -
19 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
20 Sobic.010G007400 peptidase, T1 family, putative, expressed K02739: 20S proteasome subunit beta 2


Gene co-expression network
sample Sobic010G235000 Sobic010G235000 Sobic008G014300 Sobic008G014300 Sobic010G235000--Sobic008G014300 Sobic006G203900 Sobic006G203900 Sobic010G235000--Sobic006G203900 Sobic009G112900 Sobic009G112900 Sobic010G235000--Sobic009G112900 Sobic001G013200 Sobic001G013200 Sobic010G235000--Sobic001G013200 Sobic004G232700 Sobic004G232700 Sobic010G235000--Sobic004G232700 Sobic002G342000 Sobic002G342000 Sobic010G235000--Sobic002G342000 Sobic008G136800 Sobic008G136800 Sobic010G235000--Sobic008G136800 Sobic002G217500 Sobic002G217500 Sobic010G235000--Sobic002G217500 Sobic001G518500 Sobic001G518500 Sobic010G235000--Sobic001G518500 Sobic008G014300--Sobic001G013200 Sobic003G167000 Sobic003G167000 Sobic008G014300--Sobic003G167000 Sobic008G014300--Sobic002G217500 Sobic008G014300--Sobic006G203900 Sobic009G206600 Sobic009G206600 Sobic008G014300--Sobic009G206600 Sobic005G079500 Sobic005G079500 Sobic008G014300--Sobic005G079500 Sobic006G124300 Sobic006G124300 Sobic008G014300--Sobic006G124300 Sobic008G014300--Sobic010G235000 Sobic008G014300--Sobic002G342000 Sobic006G203900--Sobic008G136800 Sobic009G211900 Sobic009G211900 Sobic006G203900--Sobic009G211900 Sobic001G035400 Sobic001G035400 Sobic006G203900--Sobic001G035400 Sobic001G073600 Sobic001G073600 Sobic006G203900--Sobic001G073600 Sobic004G138300 Sobic004G138300 Sobic006G203900--Sobic004G138300 Sobic006G203900--Sobic006G124300 Sobic003G135600 Sobic003G135600 Sobic006G203900--Sobic003G135600 Sobic009G001900 Sobic009G001900 Sobic006G203900--Sobic009G001900 Sobic007G013900 Sobic007G013900 Sobic006G203900--Sobic007G013900 Sobic008G102600 Sobic008G102600 Sobic009G112900--Sobic008G102600 Sobic009G112900--Sobic001G518500 Sobic001G060300 Sobic001G060300 Sobic009G112900--Sobic001G060300 Sobic002G262200 Sobic002G262200 Sobic009G112900--Sobic002G262200 Sobic008G175100 Sobic008G175100 Sobic009G112900--Sobic008G175100 Sobic004G159000 Sobic004G159000 Sobic009G112900--Sobic004G159000 Sobic003G196600 Sobic003G196600 Sobic009G112900--Sobic003G196600 Sobic001G342200 Sobic001G342200 Sobic009G112900--Sobic001G342200 Sobic010G007400 Sobic010G007400 Sobic009G112900--Sobic010G007400 Sobic001G013200--Sobic003G167000 Sobic007G048700 Sobic007G048700 Sobic001G013200--Sobic007G048700 Sobic001G013200--Sobic001G035400 Sobic001G013200--Sobic008G014300 Sobic001G013200--Sobic006G203900 Sobic001G013200--Sobic009G112900 Sobic003G131300 Sobic003G131300 Sobic001G013200--Sobic003G131300 Sobic010G197900 Sobic010G197900 Sobic001G013200--Sobic010G197900 Sobic007G003100 Sobic007G003100 Sobic001G013200--Sobic007G003100 Sobic007G212100 Sobic007G212100 Sobic004G232700--Sobic007G212100 Sobic002G352200 Sobic002G352200 Sobic004G232700--Sobic002G352200 Sobic001G543400 Sobic001G543400 Sobic004G232700--Sobic001G543400 Sobic009G176400 Sobic009G176400 Sobic004G232700--Sobic009G176400 Sobic007G014700 Sobic007G014700 Sobic004G232700--Sobic007G014700 Sobic004G251600 Sobic004G251600 Sobic004G232700--Sobic004G251600 Sobic004G173700 Sobic004G173700 Sobic004G232700--Sobic004G173700 Sobic004G261800 Sobic004G261800 Sobic004G232700--Sobic004G261800 Sobic002G124900 Sobic002G124900 Sobic004G232700--Sobic002G124900 Sobic002G342000--Sobic010G007400 Sobic002G342000--Sobic001G342200 Sobic004G030000 Sobic004G030000 Sobic002G342000--Sobic004G030000 Sobic001G031900 Sobic001G031900 Sobic002G342000--Sobic001G031900 Sobic003G218400 Sobic003G218400 Sobic002G342000--Sobic003G218400 Sobic002G342000--Sobic007G013900 Sobic003G152900 Sobic003G152900 Sobic002G342000--Sobic003G152900 Sobic002G309700 Sobic002G309700 Sobic002G342000--Sobic002G309700 Sobic001G031800 Sobic001G031800 Sobic002G342000--Sobic001G031800 Sobic008G136800--Sobic006G203900 Sobic008G136800--Sobic009G001900 Sobic008G136800--Sobic009G211900 Sobic008G136800--Sobic007G013900 Sobic008G136800--Sobic001G031800 Sobic008G136800--Sobic006G124300 Sobic007G141100 Sobic007G141100 Sobic008G136800--Sobic007G141100 Sobic002G296200 Sobic002G296200 Sobic008G136800--Sobic002G296200 Sobic003G074900 Sobic003G074900 Sobic008G136800--Sobic003G074900 Sobic003G016300 Sobic003G016300 Sobic002G217500--Sobic003G016300 Sobic002G217500--Sobic002G352200 Sobic002G255400 Sobic002G255400 Sobic002G217500--Sobic002G255400 Sobic006G153200 Sobic006G153200 Sobic002G217500--Sobic006G153200 Sobic001G219800 Sobic001G219800 Sobic002G217500--Sobic001G219800 Sobic008G018300 Sobic008G018300 Sobic002G217500--Sobic008G018300 Sobic003G260600 Sobic003G260600 Sobic002G217500--Sobic003G260600 Sobic007G023400 Sobic007G023400 Sobic002G217500--Sobic007G023400 Sobic009G218000 Sobic009G218000 Sobic002G217500--Sobic009G218000 Sobic001G518500--Sobic009G112900 Sobic003G129900 Sobic003G129900 Sobic001G518500--Sobic003G129900 Sobic009G224400 Sobic009G224400 Sobic001G518500--Sobic009G224400 Sobic005G019100 Sobic005G019100 Sobic001G518500--Sobic005G019100 Sobic001G387200 Sobic001G387200 Sobic001G518500--Sobic001G387200 Sobic004G039400 Sobic004G039400 Sobic001G518500--Sobic004G039400 Sobic001G518500--Sobic002G262200 Sobic002G079700 Sobic002G079700 Sobic001G518500--Sobic002G079700 Sobic007G171500 Sobic007G171500 Sobic001G518500--Sobic007G171500
Octagon: transcription factors


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