Gene annotation
Transcriptome id Sobic.001G327000.1
Synonym
Functional annotation OsFBX157 - F-box domain containing protein, expressed
UniProt A0A1Z5S9B2
Pfam PF00646
Panther DB PTHR10706 PTHR10706:SF131
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G07610 : F-box family protein
RAP-DB (Rice) LOC_Os05g04750.1 : OsFBX157 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS6B02G463200
Populus -


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cDNA sequences
Sobic.001G327000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G034000 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
2 Sobic.004G025700 PPR repeat domain containing protein, putative, expressed -
3 Sobic.007G204000 methyl-binding domain protein MBD, putative, expressed -
4 Sobic.003G409900 MYB family transcription factor, putative, expressed K12860: CDC5L, CDC5, pre-mRNA-splicing factor CDC5/CEF1
5 Sobic.006G220400 exonuclease, putative, expressed -
6 Sobic.001G498800 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3
7 Sobic.006G204700 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed K10770: ALKBH8, alkylated DNA repair protein alkB homolog 8
8 Sobic.006G191000 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
9 Sobic.002G290100 expressed protein K08739: DNA mismatch repair protein MLH3
10 Sobic.008G095900 ATP binding protein, putative, expressed K17592: sacsin
11 Sobic.002G108100 OsFBLD6 - F-box, LRR and FBD domain containing protein, expressed -
12 Sobic.003G342500 methyltransferase, putative, expressed -
13 Sobic.006G106300 - K17675: SUPV3L1, ATP-dependent RNA helicase SUPV3L1/SUV3
14 Sobic.006G237500 PPR repeat domain containing protein, putative, expressed -
15 Sobic.010G274800 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
16 Sobic.006G112500 CAF1 family ribonuclease containing protein, putative, expressed K01148: PARN, poly(A)-specific ribonuclease
17 Sobic.010G277700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IPP transferase, putative, expressed K00791: miaA, tRNA dimethylallyltransferase
18 Sobic.002G011100 expressed protein -
19 Sobic.005G048600 expressed protein -
20 Sobic.001G414100 expressed protein -


Gene co-expression network
sample Sobic001G327000 Sobic001G327000 Sobic001G034000 Sobic001G034000 Sobic001G327000--Sobic001G034000 Sobic004G025700 Sobic004G025700 Sobic001G327000--Sobic004G025700 Sobic007G204000 Sobic007G204000 Sobic001G327000--Sobic007G204000 Sobic003G409900 Sobic003G409900 Sobic001G327000--Sobic003G409900 Sobic006G220400 Sobic006G220400 Sobic001G327000--Sobic006G220400 Sobic001G498800 Sobic001G498800 Sobic001G327000--Sobic001G498800 Sobic006G204700 Sobic006G204700 Sobic001G327000--Sobic006G204700 Sobic006G191000 Sobic006G191000 Sobic001G327000--Sobic006G191000 Sobic002G290100 Sobic002G290100 Sobic001G327000--Sobic002G290100 Sobic001G034000--Sobic001G327000 Sobic003G314300 Sobic003G314300 Sobic001G034000--Sobic003G314300 Sobic005G017200 Sobic005G017200 Sobic001G034000--Sobic005G017200 Sobic002G011100 Sobic002G011100 Sobic001G034000--Sobic002G011100 Sobic001G034000--Sobic003G409900 Sobic001G034000--Sobic002G290100 Sobic003G305900 Sobic003G305900 Sobic001G034000--Sobic003G305900 Sobic003G177800 Sobic003G177800 Sobic001G034000--Sobic003G177800 Sobic001G034000--Sobic007G204000 Sobic003G394500 Sobic003G394500 Sobic004G025700--Sobic003G394500 Sobic008G095900 Sobic008G095900 Sobic004G025700--Sobic008G095900 Sobic004G025700--Sobic006G191000 Sobic010G086300 Sobic010G086300 Sobic004G025700--Sobic010G086300 Sobic007G226800 Sobic007G226800 Sobic004G025700--Sobic007G226800 Sobic001G486900 Sobic001G486900 Sobic004G025700--Sobic001G486900 Sobic010G112600 Sobic010G112600 Sobic004G025700--Sobic010G112600 Sobic002G400151 Sobic002G400151 Sobic004G025700--Sobic002G400151 Sobic004G194400 Sobic004G194400 Sobic004G025700--Sobic004G194400 Sobic007G204000--Sobic003G394500 Sobic007G118500 Sobic007G118500 Sobic007G204000--Sobic007G118500 Sobic001G203600 Sobic001G203600 Sobic007G204000--Sobic001G203600 Sobic007G204000--Sobic010G086300 Sobic007G204000--Sobic003G409900 Sobic001G043200 Sobic001G043200 Sobic007G204000--Sobic001G043200 Sobic007G204000--Sobic006G191000 Sobic007G204000--Sobic006G220400 Sobic001G385000 Sobic001G385000 Sobic007G204000--Sobic001G385000 Sobic006G106300 Sobic006G106300 Sobic003G409900--Sobic006G106300 Sobic001G389200 Sobic001G389200 Sobic003G409900--Sobic001G389200 Sobic006G060000 Sobic006G060000 Sobic003G409900--Sobic006G060000 Sobic009G122500 Sobic009G122500 Sobic003G409900--Sobic009G122500 Sobic003G021600 Sobic003G021600 Sobic003G409900--Sobic003G021600 Sobic010G223400 Sobic010G223400 Sobic003G409900--Sobic010G223400 Sobic004G254800 Sobic004G254800 Sobic003G409900--Sobic004G254800 Sobic001G015400 Sobic001G015400 Sobic003G409900--Sobic001G015400 Sobic009G128500 Sobic009G128500 Sobic003G409900--Sobic009G128500 Sobic006G220400--Sobic001G043200 Sobic005G123400 Sobic005G123400 Sobic006G220400--Sobic005G123400 Sobic009G227100 Sobic009G227100 Sobic006G220400--Sobic009G227100 Sobic006G012300 Sobic006G012300 Sobic006G220400--Sobic006G012300 Sobic006G220400--Sobic001G203600 Sobic006G103700 Sobic006G103700 Sobic006G220400--Sobic006G103700 Sobic006G220400--Sobic007G204000 Sobic004G194100 Sobic004G194100 Sobic006G220400--Sobic004G194100 Sobic004G334200 Sobic004G334200 Sobic006G220400--Sobic004G334200 Sobic001G498800--Sobic003G021600 Sobic001G498800--Sobic006G060000 Sobic001G498800--Sobic006G191000 Sobic001G498800--Sobic003G394500 Sobic001G498800--Sobic001G043200 Sobic008G152700 Sobic008G152700 Sobic001G498800--Sobic008G152700 Sobic001G498800--Sobic008G095900 Sobic001G378800 Sobic001G378800 Sobic001G498800--Sobic001G378800 Sobic010G277700 Sobic010G277700 Sobic001G498800--Sobic010G277700 Sobic006G204700--Sobic003G394500 Sobic006G204700--Sobic003G021600 Sobic006G198400 Sobic006G198400 Sobic006G204700--Sobic006G198400 Sobic006G204700--Sobic006G191000 Sobic006G204700--Sobic010G086300 Sobic006G204700--Sobic003G305900 Sobic006G112500 Sobic006G112500 Sobic006G204700--Sobic006G112500 Sobic007G218600 Sobic007G218600 Sobic006G204700--Sobic007G218600 Sobic001G114200 Sobic001G114200 Sobic006G204700--Sobic001G114200 Sobic006G191000--Sobic010G086300 Sobic001G149000 Sobic001G149000 Sobic006G191000--Sobic001G149000 Sobic006G191000--Sobic003G394500 Sobic006G191000--Sobic008G152700 Sobic006G191000--Sobic004G194400 Sobic006G232800 Sobic006G232800 Sobic006G191000--Sobic006G232800 Sobic009G046900 Sobic009G046900 Sobic006G191000--Sobic009G046900 Sobic010G274800 Sobic010G274800 Sobic006G191000--Sobic010G274800 Sobic002G304700 Sobic002G304700 Sobic006G191000--Sobic002G304700 Sobic001G356100 Sobic001G356100 Sobic002G290100--Sobic001G356100 Sobic002G290100--Sobic003G314300 Sobic002G290100--Sobic009G128500 Sobic002G290100--Sobic005G017200 Sobic003G435400 Sobic003G435400 Sobic002G290100--Sobic003G435400 Sobic002G290100--Sobic006G112500 Sobic005G087300 Sobic005G087300 Sobic002G290100--Sobic005G087300 Sobic004G049200 Sobic004G049200 Sobic002G290100--Sobic004G049200 Sobic009G116900 Sobic009G116900 Sobic002G290100--Sobic009G116900
Octagon: transcription factors


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