Gene annotation
Transcriptome id Sobic.002G012700.1
Synonym Sb02g001340
Functional annotation DUF538 domain containing protein, putative, expressed
UniProt C5X7X2
Pfam PF04398
Panther DB PTHR31676 PTHR31676:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09310 : Protein of unknown function, DUF538
RAP-DB (Rice) LOC_Os07g02900.1 : DUF538 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a009479 , Zm00025a044909 , Zm00025a044910
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G013000 DUF538 domain containing protein, putative, expressed -
2 Sobic.003G204600 expressed protein -
3 Sobic.006G259401 - K06130: lysophospholipase II
4 Sobic.002G088900 DUF538 domain containing protein, putative, expressed -
5 Sobic.002G089100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
6 Sobic.010G117500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF538 domain containing protein, putative, expressed -
7 Sobic.006G244400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nuclease PA3, putative, expressed -
8 Sobic.004G008900 Sphingoid base hydroxylase 2 SBH2 (At)(PubMedID : 27208977)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
9 Sobic.003G204501 - -
10 Sobic.001G000400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pleiotropic drug resistance protein, putative, expressed -
11 Sobic.009G235600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
12 Sobic.007G109900 bZIP transcription factor domain containing protein, expressed -
13 Sobic.004G032800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CGMC_MAPKCMGC_2.7 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
14 Sobic.003G045600 aminotransferase, classes I and II, domain containing protein, expressed -
15 Sobic.004G008800 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
16 Sobic.004G008300 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
17 Sobic.003G080900 Ser/Thr protein kinase, putative, expressed -
18 Sobic.006G246600 DUF538 domain containing protein, putative, expressed -
19 Sobic.002G236400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-independent growth promoter protein, putative, expressed -
20 Sobic.003G236800 -(PubMedID : 26976818)@bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family


Gene co-expression network
sample Sobic002G012700 Sobic002G012700 Sobic002G013000 Sobic002G013000 Sobic002G012700--Sobic002G013000 Sobic003G204600 Sobic003G204600 Sobic002G012700--Sobic003G204600 Sobic006G259401 Sobic006G259401 Sobic002G012700--Sobic006G259401 Sobic002G088900 Sobic002G088900 Sobic002G012700--Sobic002G088900 Sobic002G089100 Sobic002G089100 Sobic002G012700--Sobic002G089100 Sobic010G117500 Sobic010G117500 Sobic002G012700--Sobic010G117500 Sobic006G244400 Sobic006G244400 Sobic002G012700--Sobic006G244400 Sobic004G008900 Sobic004G008900 Sobic002G012700--Sobic004G008900 Sobic003G204501 Sobic003G204501 Sobic002G012700--Sobic003G204501 Sobic002G013000--Sobic002G089100 Sobic002G013000--Sobic002G088900 Sobic002G013000--Sobic003G204501 Sobic006G246600 Sobic006G246600 Sobic002G013000--Sobic006G246600 Sobic004G008800 Sobic004G008800 Sobic002G013000--Sobic004G008800 Sobic010G126900 Sobic010G126900 Sobic002G013000--Sobic010G126900 Sobic003G188100 Sobic003G188100 Sobic002G013000--Sobic003G188100 Sobic001G316400 Sobic001G316400 Sobic002G013000--Sobic001G316400 Sobic003G080900 Sobic003G080900 Sobic002G013000--Sobic003G080900 Sobic004G008200 Sobic004G008200 Sobic003G204600--Sobic004G008200 Sobic004G077300 Sobic004G077300 Sobic003G204600--Sobic004G077300 Sobic006G080700 Sobic006G080700 Sobic003G204600--Sobic006G080700 Sobic009G007300 Sobic009G007300 Sobic003G204600--Sobic009G007300 Sobic002G180800 Sobic002G180800 Sobic003G204600--Sobic002G180800 Sobic010G270200 Sobic010G270200 Sobic003G204600--Sobic010G270200 Sobic004G176200 Sobic004G176200 Sobic003G204600--Sobic004G176200 Sobic006G132600 Sobic006G132600 Sobic003G204600--Sobic006G132600 Sobic008G054200 Sobic008G054200 Sobic003G204600--Sobic008G054200 Sobic003G045600 Sobic003G045600 Sobic006G259401--Sobic003G045600 Sobic008G151500 Sobic008G151500 Sobic006G259401--Sobic008G151500 Sobic003G236800 Sobic003G236800 Sobic006G259401--Sobic003G236800 Sobic002G101300 Sobic002G101300 Sobic006G259401--Sobic002G101300 Sobic007G120800 Sobic007G120800 Sobic006G259401--Sobic007G120800 Sobic001G140000 Sobic001G140000 Sobic006G259401--Sobic001G140000 Sobic002G283100 Sobic002G283100 Sobic006G259401--Sobic002G283100 Sobic001G392200 Sobic001G392200 Sobic006G259401--Sobic001G392200 Sobic007G179900 Sobic007G179900 Sobic006G259401--Sobic007G179900 Sobic002G088900--Sobic002G013000 Sobic002G088900--Sobic002G089100 Sobic002G088900--Sobic003G204501 Sobic002G088900--Sobic004G008800 Sobic002G088900--Sobic006G246600 Sobic004G106900 Sobic004G106900 Sobic002G088900--Sobic004G106900 Sobic005G043900 Sobic005G043900 Sobic002G088900--Sobic005G043900 Sobic003G149200 Sobic003G149200 Sobic002G088900--Sobic003G149200 Sobic002G085300 Sobic002G085300 Sobic002G088900--Sobic002G085300 Sobic002G089100--Sobic002G013000 Sobic002G089100--Sobic004G008800 Sobic002G089100--Sobic002G088900 Sobic002G089100--Sobic006G246600 Sobic002G089100--Sobic003G204501 Sobic002G089100--Sobic005G043900 Sobic002G089100--Sobic001G316400 Sobic003G203200 Sobic003G203200 Sobic002G089100--Sobic003G203200 Sobic002G089100--Sobic003G188100 Sobic003G204400 Sobic003G204400 Sobic010G117500--Sobic003G204400 Sobic004G008300 Sobic004G008300 Sobic010G117500--Sobic004G008300 Sobic010G117500--Sobic004G008900 Sobic003G204300 Sobic003G204300 Sobic010G117500--Sobic003G204300 Sobic009G076300 Sobic009G076300 Sobic010G117500--Sobic009G076300 Sobic010G117800 Sobic010G117800 Sobic010G117500--Sobic010G117800 Sobic005G216200 Sobic005G216200 Sobic010G117500--Sobic005G216200 Sobic006G168100 Sobic006G168100 Sobic010G117500--Sobic006G168100 Sobic003G097400 Sobic003G097400 Sobic010G117500--Sobic003G097400 Sobic001G512800 Sobic001G512800 Sobic006G244400--Sobic001G512800 Sobic010G206000 Sobic010G206000 Sobic006G244400--Sobic010G206000 Sobic005G024900 Sobic005G024900 Sobic006G244400--Sobic005G024900 Sobic010G248900 Sobic010G248900 Sobic006G244400--Sobic010G248900 Sobic002G155400 Sobic002G155400 Sobic006G244400--Sobic002G155400 Sobic006G100332 Sobic006G100332 Sobic006G244400--Sobic006G100332 Sobic002G409500 Sobic002G409500 Sobic006G244400--Sobic002G409500 Sobic007G068100 Sobic007G068100 Sobic006G244400--Sobic007G068100 Sobic005G079900 Sobic005G079900 Sobic006G244400--Sobic005G079900 Sobic004G008900--Sobic010G117500 Sobic004G008900--Sobic003G204400 Sobic004G008900--Sobic004G008300 Sobic004G008900--Sobic003G204300 Sobic004G008900--Sobic010G126900 Sobic004G008900--Sobic003G097400 Sobic004G008900--Sobic009G076300 Sobic004G008900--Sobic005G216200 Sobic010G126800 Sobic010G126800 Sobic004G008900--Sobic010G126800 Sobic003G204501--Sobic004G008800 Sobic003G204501--Sobic002G013000 Sobic003G204501--Sobic002G088900 Sobic003G204501--Sobic002G089100 Sobic003G204501--Sobic006G246600 Sobic007G109900 Sobic007G109900 Sobic003G204501--Sobic007G109900 Sobic003G204501--Sobic001G316400 Sobic002G122800 Sobic002G122800 Sobic003G204501--Sobic002G122800 Sobic009G114000 Sobic009G114000 Sobic003G204501--Sobic009G114000
Octagon: transcription factors


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