Gene annotation
Transcriptome id Sobic.002G180900.1
Synonym SUVH5, Sb02g022936, SGD9
Functional annotation histone-lysine N-methyltransferase, putative, expressed
UniProt C5XAP1
Pfam PF00856 PF05033 PF02182
Panther DB PTHR22884 PTHR22884:SF370
NCBI CDD KOG1082; Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing
KEGG Orthology K11420; [histone H3]-lysine9 N-trimethyltransferase EHMT
Gene Ontology GO:0005515; protein binding GO:0018024histone-lysine N-methyltransferase activity GO:0008270zinc ion binding GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT2G35160 : SU(VAR)3-9 homolog 5
RAP-DB (Rice) LOC_Os09g19830.1 : histone-lysine N-methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a013810 , Zm00025a046669 , Zm00025a024884
Brachypodium PNT64431 , PNT64430 , PNT64432 , PNT64454 , KQJ89920
Barley -
Wheat TraesCS5A02G194500 , TraesCS5A02G194500 , TraesCS5D02G197700 , TraesCS5D02G197700 , TraesCS5A02G197900 , TraesCS5A02G197900 , TraesCS5B02G190000 , TraesCS5B02G185700 , TraesCS5D02G193000 , TraesCS5D02G193000 , TraesCS5B02G185700 , TraesCS5B02G185700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G017900 expressed protein -
2 Sobic.005G123400 expressed protein -
3 Sobic.003G113300 expressed protein -
4 Sobic.006G191200 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
5 Sobic.006G170900 growth regulator related protein, putative, expressed -
6 Sobic.010G112600 integral membrane protein, putative, expressed -
7 Sobic.001G051400 aminoacyl-tRNA synthetase, putative, expressed -
8 Sobic.001G306800 expressed protein -
9 Sobic.010G091400 AAA-type ATPase family protein, putative, expressed -
10 Sobic.003G010900 expressed protein -
11 Sobic.002G296400 E3 ubiquitin-protein ligase HERC2, putative, expressed -
12 Sobic.004G180900 PSP domain containing protein, expressed K13128: zinc finger CCHC domain-containing protein 8
13 Sobic.002G263700 bromodomain protein 103, putative, expressed -
14 Sobic.003G393200 expressed protein -
15 Sobic.002G292800 MORN repeat domain containing protein, expressed -
16 Sobic.004G097900 expressed protein -
17 Sobic.001G017200 protein transporter, putative, expressed K12275: translocation protein SEC62
18 Sobic.003G218200 pentatricopeptide containing protein, putative, expressed -
19 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
20 Sobic.001G522400 FHA domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G180900 Sobic002G180900 Sobic008G017900 Sobic008G017900 Sobic002G180900--Sobic008G017900 Sobic005G123400 Sobic005G123400 Sobic002G180900--Sobic005G123400 Sobic003G113300 Sobic003G113300 Sobic002G180900--Sobic003G113300 Sobic006G191200 Sobic006G191200 Sobic002G180900--Sobic006G191200 Sobic006G170900 Sobic006G170900 Sobic002G180900--Sobic006G170900 Sobic010G112600 Sobic010G112600 Sobic002G180900--Sobic010G112600 Sobic001G051400 Sobic001G051400 Sobic002G180900--Sobic001G051400 Sobic001G306800 Sobic001G306800 Sobic002G180900--Sobic001G306800 Sobic010G091400 Sobic010G091400 Sobic002G180900--Sobic010G091400 Sobic004G020900 Sobic004G020900 Sobic008G017900--Sobic004G020900 Sobic008G017900--Sobic002G180900 Sobic007G039300 Sobic007G039300 Sobic008G017900--Sobic007G039300 Sobic009G190200 Sobic009G190200 Sobic008G017900--Sobic009G190200 Sobic002G263700 Sobic002G263700 Sobic008G017900--Sobic002G263700 Sobic009G069200 Sobic009G069200 Sobic008G017900--Sobic009G069200 Sobic002G154400 Sobic002G154400 Sobic008G017900--Sobic002G154400 Sobic008G017900--Sobic006G191200 Sobic003G124600 Sobic003G124600 Sobic008G017900--Sobic003G124600 Sobic006G237500 Sobic006G237500 Sobic005G123400--Sobic006G237500 Sobic005G123400--Sobic010G112600 Sobic003G393200 Sobic003G393200 Sobic005G123400--Sobic003G393200 Sobic001G043200 Sobic001G043200 Sobic005G123400--Sobic001G043200 Sobic009G227100 Sobic009G227100 Sobic005G123400--Sobic009G227100 Sobic009G252300 Sobic009G252300 Sobic005G123400--Sobic009G252300 Sobic007G030100 Sobic007G030100 Sobic005G123400--Sobic007G030100 Sobic003G190200 Sobic003G190200 Sobic005G123400--Sobic003G190200 Sobic003G368400 Sobic003G368400 Sobic005G123400--Sobic003G368400 Sobic009G122500 Sobic009G122500 Sobic003G113300--Sobic009G122500 Sobic002G296400 Sobic002G296400 Sobic003G113300--Sobic002G296400 Sobic002G014800 Sobic002G014800 Sobic003G113300--Sobic002G014800 Sobic001G474400 Sobic001G474400 Sobic003G113300--Sobic001G474400 Sobic001G030000 Sobic001G030000 Sobic003G113300--Sobic001G030000 Sobic005G114500 Sobic005G114500 Sobic003G113300--Sobic005G114500 Sobic003G113300--Sobic007G030100 Sobic003G113300--Sobic003G393200 Sobic003G113300--Sobic001G051400 Sobic001G123600 Sobic001G123600 Sobic006G191200--Sobic001G123600 Sobic006G191200--Sobic002G296400 Sobic006G191200--Sobic001G051400 Sobic002G078100 Sobic002G078100 Sobic006G191200--Sobic002G078100 Sobic002G066800 Sobic002G066800 Sobic006G191200--Sobic002G066800 Sobic003G299500 Sobic003G299500 Sobic006G191200--Sobic003G299500 Sobic002G386900 Sobic002G386900 Sobic006G191200--Sobic002G386900 Sobic009G120400 Sobic009G120400 Sobic006G191200--Sobic009G120400 Sobic004G097900 Sobic004G097900 Sobic006G191200--Sobic004G097900 Sobic006G170900--Sobic005G123400 Sobic006G170900--Sobic003G124600 Sobic006G170900--Sobic003G113300 Sobic007G034200 Sobic007G034200 Sobic006G170900--Sobic007G034200 Sobic006G103700 Sobic006G103700 Sobic006G170900--Sobic006G103700 Sobic002G292800 Sobic002G292800 Sobic006G170900--Sobic002G292800 Sobic003G194800 Sobic003G194800 Sobic006G170900--Sobic003G194800 Sobic004G106250 Sobic004G106250 Sobic006G170900--Sobic004G106250 Sobic006G170900--Sobic006G237500 Sobic010G112600--Sobic005G123400 Sobic003G117800 Sobic003G117800 Sobic010G112600--Sobic003G117800 Sobic004G194400 Sobic004G194400 Sobic010G112600--Sobic004G194400 Sobic010G277700 Sobic010G277700 Sobic010G112600--Sobic010G277700 Sobic010G112600--Sobic003G190200 Sobic010G112600--Sobic009G252300 Sobic003G394500 Sobic003G394500 Sobic010G112600--Sobic003G394500 Sobic010G112600--Sobic006G237500 Sobic008G155400 Sobic008G155400 Sobic010G112600--Sobic008G155400 Sobic001G051400--Sobic002G066800 Sobic001G051400--Sobic007G034200 Sobic001G051400--Sobic003G393200 Sobic003G010900 Sobic003G010900 Sobic001G051400--Sobic003G010900 Sobic001G051400--Sobic009G120400 Sobic001G051400--Sobic006G191200 Sobic005G087300 Sobic005G087300 Sobic001G051400--Sobic005G087300 Sobic001G051400--Sobic002G078100 Sobic001G051400--Sobic005G123400 Sobic002G348400 Sobic002G348400 Sobic001G306800--Sobic002G348400 Sobic010G069500 Sobic010G069500 Sobic001G306800--Sobic010G069500 Sobic009G072033 Sobic009G072033 Sobic001G306800--Sobic009G072033 Sobic001G305900 Sobic001G305900 Sobic001G306800--Sobic001G305900 Sobic010G153400 Sobic010G153400 Sobic001G306800--Sobic010G153400 Sobic001G306800--Sobic005G123400 Sobic001G188000 Sobic001G188000 Sobic001G306800--Sobic001G188000 Sobic008G022400 Sobic008G022400 Sobic001G306800--Sobic008G022400 Sobic007G218600 Sobic007G218600 Sobic001G306800--Sobic007G218600 Sobic002G398700 Sobic002G398700 Sobic010G091400--Sobic002G398700 Sobic003G218200 Sobic003G218200 Sobic010G091400--Sobic003G218200 Sobic009G194000 Sobic009G194000 Sobic010G091400--Sobic009G194000 Sobic003G021600 Sobic003G021600 Sobic010G091400--Sobic003G021600 Sobic008G037700 Sobic008G037700 Sobic010G091400--Sobic008G037700 Sobic003G297700 Sobic003G297700 Sobic010G091400--Sobic003G297700 Sobic002G252400 Sobic002G252400 Sobic010G091400--Sobic002G252400 Sobic002G356200 Sobic002G356200 Sobic010G091400--Sobic002G356200 Sobic003G181700 Sobic003G181700 Sobic010G091400--Sobic003G181700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.