Gene annotation
Transcriptome id Sobic.002G223401.1,Sobic.002G223401.2
Synonym -
Functional annotation -
UniProt A0A1W0W5D4 , A0A1W0W5I1
Pfam PF02897 PF00326 PF02897
Panther DB PTHR11757 PTHR11757:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008236; serine-type peptidase activity GO:0006508proteolysis GO:0004252serine-type endopeptidase activity GO:0004252serine-type endopeptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT5G66960 : Prolyl oligopeptidase family protein
RAP-DB (Rice) LOC_Os09g29950.1,LOC_Os09g29950.2 : OsPOP19 - Putative Prolyl Oligopeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a014033
Brachypodium PNT64714 , PNT64715 , PNT64716 , PNT64712 , PNT64713 , KQJ90495
Barley HORVU5Hr1G067810.13 , HORVU5Hr1G067810.12 , HORVU5Hr1G067810.11 , HORVU5Hr1G067810.10 , HORVU5Hr1G067810.17 , HORVU5Hr1G067810.16 , HORVU5Hr1G067810.15 , HORVU5Hr1G067810.14 , HORVU5Hr1G067810.19 , HORVU5Hr1G067810.18 , HORVU5Hr1G067810.3 , HORVU5Hr1G067810.2 , HORVU5Hr1G067810.1 , HORVU5Hr1G067810.7 , HORVU5Hr1G067810.6 , HORVU5Hr1G067810.5 , HORVU5Hr1G067810.4 , HORVU5Hr1G067810.9 , HORVU5Hr1G067810.8 , HORVU5Hr1G067810.20 , HORVU5Hr1G067810.21
Wheat TraesCS5A02G236000 , TraesCS5A02G236000 , TraesCS5B02G234300 , TraesCS5D02G243000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G231800 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
2 Sobic.003G221600 expressed protein -
3 Sobic.005G059200 bromodomain domain containing protein, expressed -
4 Sobic.009G145101 - -
5 Sobic.009G101200 expressed protein K17973: NAA25, N-terminal acetyltransferase B complex non-catalytic subunit
6 Sobic.010G003400 - K12598: MTR4, ATP-dependent RNA helicase DOB1
7 Sobic.007G220300 WD domain, G-beta repeat domain containing protein, expressed K11374: elongator complex protein 2
8 Sobic.006G185200 RNA polymerase IV subunit, putative, expressed K16250: DNA-directed RNA polymerase IV subunit 1
9 Sobic.001G081000 nucleotide-binding protein-like, putative, expressed K03593: mrp, ATP-binding protein involved in chromosome partitioning
10 Sobic.006G086600 IKI3 family protein, expressed K11373: ELP1, IKI3, elongator complex protein 1
11 Sobic.009G217200 DNA-directed RNA polymerase III subunit RPC1, putative, expressed K02999: RPA1, DNA-directed RNA polymerase I subunit RPA1
12 Sobic.002G373950 - -
13 Sobic.002G299400 PPR repeat domain containing protein, putative, expressed -
14 Sobic.009G246500 N-acetyltransferase 10, putative, expressed K14521: NAT10, N-acetyltransferase 10
15 Sobic.003G059400 HEAT repeat family protein, putative, expressed K14550: UTP10, U3 small nucleolar RNA-associated protein 10
16 Sobic.006G049600 methyltransferase domain containing protein, expressed -
17 Sobic.001G171600 PPR repeat containing protein, expressed K17964: leucine-rich PPR motif-containing protein, mitochondrial
18 Sobic.009G213200 PPR repeat domain containing protein, putative, expressed -
19 Sobic.007G077900 zinc finger domain, LSD1 subclass family protein, expressed -
20 Sobic.002G378100 DNA-directed RNA polymerase 1B, mitochondrial precursor, putative, expressed K10908: POLRMT, DNA-directed RNA polymerase, mitochondrial


Gene co-expression network
sample Sobic002G223401 Sobic002G223401 Sobic006G231800 Sobic006G231800 Sobic002G223401--Sobic006G231800 Sobic003G221600 Sobic003G221600 Sobic002G223401--Sobic003G221600 Sobic005G059200 Sobic005G059200 Sobic002G223401--Sobic005G059200 Sobic009G145101 Sobic009G145101 Sobic002G223401--Sobic009G145101 Sobic009G101200 Sobic009G101200 Sobic002G223401--Sobic009G101200 Sobic010G003400 Sobic010G003400 Sobic002G223401--Sobic010G003400 Sobic007G220300 Sobic007G220300 Sobic002G223401--Sobic007G220300 Sobic006G185200 Sobic006G185200 Sobic002G223401--Sobic006G185200 Sobic001G081000 Sobic001G081000 Sobic002G223401--Sobic001G081000 Sobic001G422500 Sobic001G422500 Sobic006G231800--Sobic001G422500 Sobic006G231800--Sobic009G145101 Sobic002G378100 Sobic002G378100 Sobic006G231800--Sobic002G378100 Sobic006G231800--Sobic006G185200 Sobic009G213200 Sobic009G213200 Sobic006G231800--Sobic009G213200 Sobic006G049600 Sobic006G049600 Sobic006G231800--Sobic006G049600 Sobic001G119600 Sobic001G119600 Sobic006G231800--Sobic001G119600 Sobic006G231800--Sobic010G003400 Sobic002G373950 Sobic002G373950 Sobic006G231800--Sobic002G373950 Sobic003G221600--Sobic001G081000 Sobic003G258900 Sobic003G258900 Sobic003G221600--Sobic003G258900 Sobic008G078300 Sobic008G078300 Sobic003G221600--Sobic008G078300 Sobic003G221600--Sobic009G145101 Sobic005G157100 Sobic005G157100 Sobic003G221600--Sobic005G157100 Sobic003G221600--Sobic007G220300 Sobic008G131000 Sobic008G131000 Sobic003G221600--Sobic008G131000 Sobic003G267800 Sobic003G267800 Sobic003G221600--Sobic003G267800 Sobic006G226300 Sobic006G226300 Sobic003G221600--Sobic006G226300 Sobic005G059200--Sobic003G258900 Sobic005G059200--Sobic009G145101 Sobic001G246200 Sobic001G246200 Sobic005G059200--Sobic001G246200 Sobic009G251200 Sobic009G251200 Sobic005G059200--Sobic009G251200 Sobic005G059200--Sobic001G081000 Sobic008G101000 Sobic008G101000 Sobic005G059200--Sobic008G101000 Sobic009G221000 Sobic009G221000 Sobic005G059200--Sobic009G221000 Sobic003G189333 Sobic003G189333 Sobic005G059200--Sobic003G189333 Sobic005G059200--Sobic002G223401 Sobic009G145101--Sobic001G081000 Sobic009G145101--Sobic006G231800 Sobic009G145101--Sobic005G059200 Sobic009G145101--Sobic003G189333 Sobic002G105101 Sobic002G105101 Sobic009G145101--Sobic002G105101 Sobic009G145101--Sobic006G226300 Sobic009G145101--Sobic003G221600 Sobic007G217100 Sobic007G217100 Sobic009G145101--Sobic007G217100 Sobic009G145101--Sobic009G251200 Sobic006G086600 Sobic006G086600 Sobic009G101200--Sobic006G086600 Sobic009G101200--Sobic010G003400 Sobic001G145400 Sobic001G145400 Sobic009G101200--Sobic001G145400 Sobic001G259000 Sobic001G259000 Sobic009G101200--Sobic001G259000 Sobic004G085000 Sobic004G085000 Sobic009G101200--Sobic004G085000 Sobic001G052400 Sobic001G052400 Sobic009G101200--Sobic001G052400 Sobic009G246500 Sobic009G246500 Sobic009G101200--Sobic009G246500 Sobic001G429600 Sobic001G429600 Sobic009G101200--Sobic001G429600 Sobic009G101200--Sobic006G049600 Sobic010G003400--Sobic006G086600 Sobic001G453400 Sobic001G453400 Sobic010G003400--Sobic001G453400 Sobic010G003400--Sobic001G052400 Sobic010G003400--Sobic009G101200 Sobic003G260400 Sobic003G260400 Sobic010G003400--Sobic003G260400 Sobic001G004400 Sobic001G004400 Sobic010G003400--Sobic001G004400 Sobic004G320500 Sobic004G320500 Sobic010G003400--Sobic004G320500 Sobic001G089600 Sobic001G089600 Sobic010G003400--Sobic001G089600 Sobic004G030800 Sobic004G030800 Sobic010G003400--Sobic004G030800 Sobic007G220300--Sobic006G086600 Sobic007G220300--Sobic008G131000 Sobic002G317200 Sobic002G317200 Sobic007G220300--Sobic002G317200 Sobic001G334700 Sobic001G334700 Sobic007G220300--Sobic001G334700 Sobic001G171600 Sobic001G171600 Sobic007G220300--Sobic001G171600 Sobic004G332400 Sobic004G332400 Sobic007G220300--Sobic004G332400 Sobic007G220300--Sobic001G081000 Sobic003G171500 Sobic003G171500 Sobic007G220300--Sobic003G171500 Sobic007G207200 Sobic007G207200 Sobic007G220300--Sobic007G207200 Sobic006G185200--Sobic002G378100 Sobic006G185200--Sobic004G085000 Sobic008G017100 Sobic008G017100 Sobic006G185200--Sobic008G017100 Sobic001G214600 Sobic001G214600 Sobic006G185200--Sobic001G214600 Sobic006G185200--Sobic009G213200 Sobic010G147833 Sobic010G147833 Sobic006G185200--Sobic010G147833 Sobic004G223600 Sobic004G223600 Sobic006G185200--Sobic004G223600 Sobic004G260100 Sobic004G260100 Sobic006G185200--Sobic004G260100 Sobic006G185200--Sobic001G145400 Sobic004G018300 Sobic004G018300 Sobic001G081000--Sobic004G018300 Sobic001G081000--Sobic003G221600 Sobic001G081000--Sobic008G131000 Sobic003G141500 Sobic003G141500 Sobic001G081000--Sobic003G141500 Sobic008G014500 Sobic008G014500 Sobic001G081000--Sobic008G014500 Sobic001G081000--Sobic003G258900 Sobic008G083000 Sobic008G083000 Sobic001G081000--Sobic008G083000 Sobic001G081000--Sobic007G220300 Sobic001G081000--Sobic009G145101
Octagon: transcription factors


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