Gene annotation
Transcriptome id Sobic.003G221600.1
Synonym Sb03g028000
Functional annotation expressed protein
UniProt C5XR26
Pfam PF15370
Panther DB PTHR28674
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G71430 : -
RAP-DB (Rice) LOC_Os01g43060.1 : expressed protein
MaizeGDB (Corn) Zm00025a000498 , Zm00025a028406 , Zm00025a000510
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G221600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G081000 nucleotide-binding protein-like, putative, expressed K03593: mrp, ATP-binding protein involved in chromosome partitioning
2 Sobic.003G258900 ZOS3-17 - C2H2 zinc finger protein, expressed K12827: SF3A3, SAP61, splicing factor 3A subunit 3
3 Sobic.008G078300 la domain containing protein, expressed K15191: La-related protein 7
4 Sobic.009G145101 - -
5 Sobic.005G157100 THUMP domain-containing protein, putative, expressed K06963: TAN1, tRNA acetyltransferase TAN1
6 Sobic.007G220300 WD domain, G-beta repeat domain containing protein, expressed K11374: elongator complex protein 2
7 Sobic.008G131000 domain of unknown function family protein, expressed -
8 Sobic.003G267800 ranBP1 domain containing protein, expressed K15304: Ran-binding protein 3
9 Sobic.006G226300 SDA1, putative, expressed K14856: SDA1, protein SDA1
10 Sobic.009G046700 ranBP1 domain containing protein, expressed K15304: Ran-binding protein 3
11 Sobic.006G102100 ZOS3-17 - C2H2 zinc finger protein, expressed K12827: SF3A3, SAP61, splicing factor 3A subunit 3
12 Sobic.006G231800 double-strand break repair protein MRE11, putative, expressed K10865: double-strand break repair protein MRE11
13 Sobic.006G194400 cyclin-T1-4, putative, expressed K15188: cyclin T
14 Sobic.005G178800 OsFBX135 - F-box domain containing protein, expressed -
15 Sobic.002G223401 - -
16 Sobic.009G251200 expressed protein -
17 Sobic.009G143800 - K14806: DDX31, ATP-dependent RNA helicase DDX31/DBP7
18 Sobic.008G014500 RNA recognition motif containing protein, expressed K13161: heterogeneous nuclear ribonucleoprotein R
19 Sobic.004G087600 RNA recognition motif containing protein, putative, expressed -
20 Sobic.005G133500 expressed protein -


Gene co-expression network
sample Sobic003G221600 Sobic003G221600 Sobic001G081000 Sobic001G081000 Sobic003G221600--Sobic001G081000 Sobic003G258900 Sobic003G258900 Sobic003G221600--Sobic003G258900 Sobic008G078300 Sobic008G078300 Sobic003G221600--Sobic008G078300 Sobic009G145101 Sobic009G145101 Sobic003G221600--Sobic009G145101 Sobic005G157100 Sobic005G157100 Sobic003G221600--Sobic005G157100 Sobic007G220300 Sobic007G220300 Sobic003G221600--Sobic007G220300 Sobic008G131000 Sobic008G131000 Sobic003G221600--Sobic008G131000 Sobic003G267800 Sobic003G267800 Sobic003G221600--Sobic003G267800 Sobic006G226300 Sobic006G226300 Sobic003G221600--Sobic006G226300 Sobic004G018300 Sobic004G018300 Sobic001G081000--Sobic004G018300 Sobic001G081000--Sobic003G221600 Sobic001G081000--Sobic008G131000 Sobic003G141500 Sobic003G141500 Sobic001G081000--Sobic003G141500 Sobic008G014500 Sobic008G014500 Sobic001G081000--Sobic008G014500 Sobic001G081000--Sobic003G258900 Sobic008G083000 Sobic008G083000 Sobic001G081000--Sobic008G083000 Sobic001G081000--Sobic007G220300 Sobic001G081000--Sobic009G145101 Sobic002G396000 Sobic002G396000 Sobic003G258900--Sobic002G396000 Sobic002G158700 Sobic002G158700 Sobic003G258900--Sobic002G158700 Sobic003G258900--Sobic003G267800 Sobic006G102100 Sobic006G102100 Sobic003G258900--Sobic006G102100 Sobic003G258900--Sobic001G081000 Sobic003G258900--Sobic006G226300 Sobic003G442000 Sobic003G442000 Sobic003G258900--Sobic003G442000 Sobic009G225200 Sobic009G225200 Sobic003G258900--Sobic009G225200 Sobic009G046700 Sobic009G046700 Sobic003G258900--Sobic009G046700 Sobic008G078300--Sobic003G258900 Sobic008G078300--Sobic002G396000 Sobic008G078300--Sobic001G081000 Sobic002G417800 Sobic002G417800 Sobic008G078300--Sobic002G417800 Sobic008G078300--Sobic004G018300 Sobic008G078300--Sobic003G221600 Sobic001G498200 Sobic001G498200 Sobic008G078300--Sobic001G498200 Sobic003G018900 Sobic003G018900 Sobic008G078300--Sobic003G018900 Sobic008G078300--Sobic009G046700 Sobic009G145101--Sobic001G081000 Sobic006G231800 Sobic006G231800 Sobic009G145101--Sobic006G231800 Sobic005G059200 Sobic005G059200 Sobic009G145101--Sobic005G059200 Sobic003G189333 Sobic003G189333 Sobic009G145101--Sobic003G189333 Sobic002G105101 Sobic002G105101 Sobic009G145101--Sobic002G105101 Sobic009G145101--Sobic006G226300 Sobic009G145101--Sobic003G221600 Sobic007G217100 Sobic007G217100 Sobic009G145101--Sobic007G217100 Sobic009G251200 Sobic009G251200 Sobic009G145101--Sobic009G251200 Sobic010G209400 Sobic010G209400 Sobic005G157100--Sobic010G209400 Sobic005G157100--Sobic006G226300 Sobic005G157100--Sobic008G014500 Sobic005G157100--Sobic008G131000 Sobic001G167200 Sobic001G167200 Sobic005G157100--Sobic001G167200 Sobic005G157100--Sobic002G158700 Sobic001G511500 Sobic001G511500 Sobic005G157100--Sobic001G511500 Sobic005G157100--Sobic003G258900 Sobic010G065300 Sobic010G065300 Sobic005G157100--Sobic010G065300 Sobic006G086600 Sobic006G086600 Sobic007G220300--Sobic006G086600 Sobic007G220300--Sobic008G131000 Sobic002G317200 Sobic002G317200 Sobic007G220300--Sobic002G317200 Sobic001G334700 Sobic001G334700 Sobic007G220300--Sobic001G334700 Sobic001G171600 Sobic001G171600 Sobic007G220300--Sobic001G171600 Sobic004G332400 Sobic004G332400 Sobic007G220300--Sobic004G332400 Sobic007G220300--Sobic001G081000 Sobic003G171500 Sobic003G171500 Sobic007G220300--Sobic003G171500 Sobic007G207200 Sobic007G207200 Sobic007G220300--Sobic007G207200 Sobic010G236400 Sobic010G236400 Sobic008G131000--Sobic010G236400 Sobic008G131000--Sobic008G083000 Sobic003G266001 Sobic003G266001 Sobic008G131000--Sobic003G266001 Sobic008G131000--Sobic002G396000 Sobic008G131000--Sobic010G209400 Sobic003G401100 Sobic003G401100 Sobic008G131000--Sobic003G401100 Sobic006G194400 Sobic006G194400 Sobic008G131000--Sobic006G194400 Sobic004G084300 Sobic004G084300 Sobic008G131000--Sobic004G084300 Sobic003G187500 Sobic003G187500 Sobic008G131000--Sobic003G187500 Sobic005G133500 Sobic005G133500 Sobic003G267800--Sobic005G133500 Sobic003G267800--Sobic003G258900 Sobic002G058400 Sobic002G058400 Sobic003G267800--Sobic002G058400 Sobic003G239900 Sobic003G239900 Sobic003G267800--Sobic003G239900 Sobic009G175900 Sobic009G175900 Sobic003G267800--Sobic009G175900 Sobic003G267800--Sobic002G158700 Sobic003G440700 Sobic003G440700 Sobic003G267800--Sobic003G440700 Sobic006G217200 Sobic006G217200 Sobic003G267800--Sobic006G217200 Sobic003G267800--Sobic002G396000 Sobic002G142600 Sobic002G142600 Sobic006G226300--Sobic002G142600 Sobic001G346900 Sobic001G346900 Sobic006G226300--Sobic001G346900 Sobic006G226300--Sobic005G157100 Sobic003G042400 Sobic003G042400 Sobic006G226300--Sobic003G042400 Sobic004G285000 Sobic004G285000 Sobic006G226300--Sobic004G285000 Sobic008G147200 Sobic008G147200 Sobic006G226300--Sobic008G147200 Sobic005G137700 Sobic005G137700 Sobic006G226300--Sobic005G137700 Sobic006G226300--Sobic003G258900 Sobic001G246500 Sobic001G246500 Sobic006G226300--Sobic001G246500
Octagon: transcription factors


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