Gene annotation
Transcriptome id Sobic.005G178800.2,Sobic.005G178800.1
Synonym Sb05g023785
Functional annotation OsFBX135 - F-box domain containing protein, expressed
UniProt C5Y5V9
Pfam -
Panther DB PTHR32212 PTHR32212:SF75
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G16930 : F-box/RNI-like/FBD-like domains-containing protein
RAP-DB (Rice) LOC_Os04g35940.1 : OsFBX135 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G178800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G346900 RNA cap guanine-N2 methyltransferase domain containing protein, expressed K14292: trimethylguanosine synthase
2 Sobic.003G001400 expressed protein -
3 Sobic.005G133500 expressed protein -
4 Sobic.002G126300 expressed protein -
5 Sobic.004G332400 neurochondrin family protein, putative, expressed -
6 Sobic.001G010300 WD domain, G-beta repeat domain containing protein, expressed -
7 Sobic.003G221600 expressed protein -
8 Sobic.001G066300 cell cycle control protein, putative, expressed -
9 Sobic.004G285000 MT-A70 domain containing protein, expressed K05925: mRNA m6A methyltransferase catalytic subunit
10 Sobic.010G039900 OsFBDUF30 - F-box and DUF domain containing protein, expressed -
11 Sobic.002G252100 methyl-binding domain protein MBD, putative, expressed -
12 Sobic.004G010500 OsFBX52 - F-box domain containing protein, expressed -
13 Sobic.005G157100 THUMP domain-containing protein, putative, expressed K06963: TAN1, tRNA acetyltransferase TAN1
14 Sobic.005G178950 - -
15 Sobic.002G137200 ZOS9-21 - C2H2 zinc finger protein, expressed -
16 Sobic.007G187600 pentatricopeptide, putative, expressed -
17 Sobic.008G164600 expressed protein -
18 Sobic.004G086200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
19 Sobic.001G091400 expressed protein -
20 Sobic.008G014500 RNA recognition motif containing protein, expressed K13161: heterogeneous nuclear ribonucleoprotein R


Gene co-expression network
sample Sobic005G178800 Sobic005G178800 Sobic001G346900 Sobic001G346900 Sobic005G178800--Sobic001G346900 Sobic003G001400 Sobic003G001400 Sobic005G178800--Sobic003G001400 Sobic005G133500 Sobic005G133500 Sobic005G178800--Sobic005G133500 Sobic002G126300 Sobic002G126300 Sobic005G178800--Sobic002G126300 Sobic004G332400 Sobic004G332400 Sobic005G178800--Sobic004G332400 Sobic001G010300 Sobic001G010300 Sobic005G178800--Sobic001G010300 Sobic003G221600 Sobic003G221600 Sobic005G178800--Sobic003G221600 Sobic001G066300 Sobic001G066300 Sobic005G178800--Sobic001G066300 Sobic004G285000 Sobic004G285000 Sobic005G178800--Sobic004G285000 Sobic004G086200 Sobic004G086200 Sobic001G346900--Sobic004G086200 Sobic003G409200 Sobic003G409200 Sobic001G346900--Sobic003G409200 Sobic001G134300 Sobic001G134300 Sobic001G346900--Sobic001G134300 Sobic003G042400 Sobic003G042400 Sobic001G346900--Sobic003G042400 Sobic008G147200 Sobic008G147200 Sobic001G346900--Sobic008G147200 Sobic001G346900--Sobic004G285000 Sobic003G416700 Sobic003G416700 Sobic001G346900--Sobic003G416700 Sobic010G096000 Sobic010G096000 Sobic001G346900--Sobic010G096000 Sobic002G422100 Sobic002G422100 Sobic001G346900--Sobic002G422100 Sobic008G014500 Sobic008G014500 Sobic003G001400--Sobic008G014500 Sobic003G001400--Sobic001G346900 Sobic003G001400--Sobic001G066300 Sobic001G091400 Sobic001G091400 Sobic003G001400--Sobic001G091400 Sobic002G317200 Sobic002G317200 Sobic003G001400--Sobic002G317200 Sobic001G398800 Sobic001G398800 Sobic003G001400--Sobic001G398800 Sobic003G001400--Sobic005G178800 Sobic010G236400 Sobic010G236400 Sobic003G001400--Sobic010G236400 Sobic003G001400--Sobic004G332400 Sobic009G151200 Sobic009G151200 Sobic005G133500--Sobic009G151200 Sobic002G423200 Sobic002G423200 Sobic005G133500--Sobic002G423200 Sobic003G267800 Sobic003G267800 Sobic005G133500--Sobic003G267800 Sobic002G259800 Sobic002G259800 Sobic005G133500--Sobic002G259800 Sobic006G217200 Sobic006G217200 Sobic005G133500--Sobic006G217200 Sobic008G131000 Sobic008G131000 Sobic005G133500--Sobic008G131000 Sobic004G246100 Sobic004G246100 Sobic005G133500--Sobic004G246100 Sobic005G133500--Sobic010G236400 Sobic001G080900 Sobic001G080900 Sobic005G133500--Sobic001G080900 Sobic009G088000 Sobic009G088000 Sobic002G126300--Sobic009G088000 Sobic002G126300--Sobic004G246100 Sobic004G048800 Sobic004G048800 Sobic002G126300--Sobic004G048800 Sobic008G002500 Sobic008G002500 Sobic002G126300--Sobic008G002500 Sobic010G209400 Sobic010G209400 Sobic002G126300--Sobic010G209400 Sobic008G098300 Sobic008G098300 Sobic002G126300--Sobic008G098300 Sobic002G126300--Sobic010G236400 Sobic001G522600 Sobic001G522600 Sobic002G126300--Sobic001G522600 Sobic002G126300--Sobic008G014500 Sobic006G040800 Sobic006G040800 Sobic004G332400--Sobic006G040800 Sobic004G332400--Sobic008G002500 Sobic004G321700 Sobic004G321700 Sobic004G332400--Sobic004G321700 Sobic009G143800 Sobic009G143800 Sobic004G332400--Sobic009G143800 Sobic003G188400 Sobic003G188400 Sobic004G332400--Sobic003G188400 Sobic002G425500 Sobic002G425500 Sobic004G332400--Sobic002G425500 Sobic004G332400--Sobic001G346900 Sobic004G332400--Sobic008G147200 Sobic004G040200 Sobic004G040200 Sobic004G332400--Sobic004G040200 Sobic001G010300--Sobic010G236400 Sobic010G245000 Sobic010G245000 Sobic001G010300--Sobic010G245000 Sobic004G084300 Sobic004G084300 Sobic001G010300--Sobic004G084300 Sobic006G195700 Sobic006G195700 Sobic001G010300--Sobic006G195700 Sobic007G075900 Sobic007G075900 Sobic001G010300--Sobic007G075900 Sobic004G158200 Sobic004G158200 Sobic001G010300--Sobic004G158200 Sobic005G154500 Sobic005G154500 Sobic001G010300--Sobic005G154500 Sobic008G173100 Sobic008G173100 Sobic001G010300--Sobic008G173100 Sobic003G401100 Sobic003G401100 Sobic001G010300--Sobic003G401100 Sobic001G081000 Sobic001G081000 Sobic003G221600--Sobic001G081000 Sobic003G258900 Sobic003G258900 Sobic003G221600--Sobic003G258900 Sobic008G078300 Sobic008G078300 Sobic003G221600--Sobic008G078300 Sobic009G145101 Sobic009G145101 Sobic003G221600--Sobic009G145101 Sobic005G157100 Sobic005G157100 Sobic003G221600--Sobic005G157100 Sobic007G220300 Sobic007G220300 Sobic003G221600--Sobic007G220300 Sobic003G221600--Sobic008G131000 Sobic003G221600--Sobic003G267800 Sobic006G226300 Sobic006G226300 Sobic003G221600--Sobic006G226300 Sobic001G066300--Sobic008G173100 Sobic006G186400 Sobic006G186400 Sobic001G066300--Sobic006G186400 Sobic001G026200 Sobic001G026200 Sobic001G066300--Sobic001G026200 Sobic007G090430 Sobic007G090430 Sobic001G066300--Sobic007G090430 Sobic007G056500 Sobic007G056500 Sobic001G066300--Sobic007G056500 Sobic001G066300--Sobic001G398800 Sobic002G071500 Sobic002G071500 Sobic001G066300--Sobic002G071500 Sobic002G264200 Sobic002G264200 Sobic001G066300--Sobic002G264200 Sobic002G063900 Sobic002G063900 Sobic001G066300--Sobic002G063900 Sobic004G285000--Sobic004G086200 Sobic004G111000 Sobic004G111000 Sobic004G285000--Sobic004G111000 Sobic004G285000--Sobic001G346900 Sobic003G427100 Sobic003G427100 Sobic004G285000--Sobic003G427100 Sobic004G285000--Sobic009G151200 Sobic010G215900 Sobic010G215900 Sobic004G285000--Sobic010G215900 Sobic004G285000--Sobic003G409200 Sobic007G044100 Sobic007G044100 Sobic004G285000--Sobic007G044100 Sobic001G013300 Sobic001G013300 Sobic004G285000--Sobic001G013300
Octagon: transcription factors


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