Gene annotation
Transcriptome id Sobic.010G039900.1
Synonym
Functional annotation OsFBDUF30 - F-box and DUF domain containing protein, expressed
UniProt A0A1W0VRD7
Pfam PF03478
Panther DB PTHR33110 PTHR33110:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65740 : Protein of unknown function (DUF295)
RAP-DB (Rice) LOC_Os06g05580.1 : OsFBDUF30 - F-box and DUF domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G063900 zinc ion binding protein, putative, expressed -
2 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
3 Sobic.004G285000 MT-A70 domain containing protein, expressed K05925: mRNA m6A methyltransferase catalytic subunit
4 Sobic.004G223600 transcription factor-related, putative, expressed K15199: general transcription factor 3C polypeptide 1
5 Sobic.001G134300 - K17613: calcineurin-binding protein cabin-1
6 Sobic.004G086200 peptidyl-prolyl cis-trans isomerase, putative, expressed K09566: peptidyl-prolyl isomerase G (cyclophilin G)
7 Sobic.002G278000 endonuclease/exonuclease/phosphatase family protein, putative, expressed K10772: AP endonuclease 2
8 Sobic.004G097900 expressed protein -
9 Sobic.006G215900 OsFBX172 - F-box domain containing protein, expressed -
10 Sobic.002G126300 expressed protein -
11 Sobic.009G251200 expressed protein -
12 Sobic.001G398800 FHA domain containing protein, putative, expressed -
13 Sobic.002G260400 - -
14 Sobic.008G173100 actin, putative, expressed K11662: ACTR6, actin-related protein 6
15 Sobic.001G167200 DNA-directed polymerase, putative, expressed K03511: DNA polymerase kappa
16 Sobic.006G185200 RNA polymerase IV subunit, putative, expressed K16250: DNA-directed RNA polymerase IV subunit 1
17 Sobic.001G346900 RNA cap guanine-N2 methyltransferase domain containing protein, expressed K14292: trimethylguanosine synthase
18 Sobic.005G191900 transporter family protein, putative, expressed -
19 Sobic.007G071200 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
20 Sobic.009G247400 PX domain containing protein, putative, expressed K17925: sorting nexin-13


Gene co-expression network
sample Sobic010G039900 Sobic010G039900 Sobic002G063900 Sobic002G063900 Sobic010G039900--Sobic002G063900 Sobic004G246100 Sobic004G246100 Sobic010G039900--Sobic004G246100 Sobic004G285000 Sobic004G285000 Sobic010G039900--Sobic004G285000 Sobic004G223600 Sobic004G223600 Sobic010G039900--Sobic004G223600 Sobic001G134300 Sobic001G134300 Sobic010G039900--Sobic001G134300 Sobic004G086200 Sobic004G086200 Sobic010G039900--Sobic004G086200 Sobic002G278000 Sobic002G278000 Sobic010G039900--Sobic002G278000 Sobic004G097900 Sobic004G097900 Sobic010G039900--Sobic004G097900 Sobic006G215900 Sobic006G215900 Sobic010G039900--Sobic006G215900 Sobic008G173100 Sobic008G173100 Sobic002G063900--Sobic008G173100 Sobic006G116100 Sobic006G116100 Sobic002G063900--Sobic006G116100 Sobic004G357100 Sobic004G357100 Sobic002G063900--Sobic004G357100 Sobic002G260400 Sobic002G260400 Sobic002G063900--Sobic002G260400 Sobic007G090430 Sobic007G090430 Sobic002G063900--Sobic007G090430 Sobic002G063900--Sobic004G246100 Sobic002G063900--Sobic002G278000 Sobic008G149800 Sobic008G149800 Sobic002G063900--Sobic008G149800 SobicK028600 SobicK028600 Sobic002G063900--SobicK028600 Sobic004G246100--Sobic008G149800 Sobic008G153000 Sobic008G153000 Sobic004G246100--Sobic008G153000 Sobic007G061700 Sobic007G061700 Sobic004G246100--Sobic007G061700 Sobic004G246100--Sobic002G063900 Sobic004G246100--Sobic008G173100 Sobic004G246100--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic004G246100--Sobic006G046700 Sobic009G137100 Sobic009G137100 Sobic004G246100--Sobic009G137100 Sobic004G246100--Sobic002G260400 Sobic004G285000--Sobic004G086200 Sobic004G111000 Sobic004G111000 Sobic004G285000--Sobic004G111000 Sobic001G346900 Sobic001G346900 Sobic004G285000--Sobic001G346900 Sobic003G427100 Sobic003G427100 Sobic004G285000--Sobic003G427100 Sobic009G151200 Sobic009G151200 Sobic004G285000--Sobic009G151200 Sobic010G215900 Sobic010G215900 Sobic004G285000--Sobic010G215900 Sobic003G409200 Sobic003G409200 Sobic004G285000--Sobic003G409200 Sobic007G044100 Sobic007G044100 Sobic004G285000--Sobic007G044100 Sobic001G013300 Sobic001G013300 Sobic004G285000--Sobic001G013300 Sobic001G219900 Sobic001G219900 Sobic004G223600--Sobic001G219900 Sobic001G214600 Sobic001G214600 Sobic004G223600--Sobic001G214600 Sobic002G317200 Sobic002G317200 Sobic004G223600--Sobic002G317200 Sobic003G307000 Sobic003G307000 Sobic004G223600--Sobic003G307000 Sobic007G042400 Sobic007G042400 Sobic004G223600--Sobic007G042400 Sobic009G247400 Sobic009G247400 Sobic004G223600--Sobic009G247400 Sobic001G311500 Sobic001G311500 Sobic004G223600--Sobic001G311500 Sobic002G071500 Sobic002G071500 Sobic004G223600--Sobic002G071500 Sobic003G152400 Sobic003G152400 Sobic004G223600--Sobic003G152400 Sobic010G065300 Sobic010G065300 Sobic001G134300--Sobic010G065300 Sobic001G306900 Sobic001G306900 Sobic001G134300--Sobic001G306900 Sobic010G001100 Sobic010G001100 Sobic001G134300--Sobic010G001100 Sobic004G156500 Sobic004G156500 Sobic001G134300--Sobic004G156500 Sobic001G134300--Sobic004G086200 Sobic001G398800 Sobic001G398800 Sobic001G134300--Sobic001G398800 Sobic001G090800 Sobic001G090800 Sobic001G134300--Sobic001G090800 Sobic001G134300--Sobic001G346900 Sobic002G153700 Sobic002G153700 Sobic001G134300--Sobic002G153700 Sobic004G086200--Sobic001G346900 Sobic004G086200--Sobic004G285000 Sobic004G086200--Sobic001G134300 Sobic001G245900 Sobic001G245900 Sobic004G086200--Sobic001G245900 Sobic004G086200--Sobic001G306900 Sobic010G096000 Sobic010G096000 Sobic004G086200--Sobic010G096000 Sobic010G279900 Sobic010G279900 Sobic004G086200--Sobic010G279900 Sobic001G246500 Sobic001G246500 Sobic004G086200--Sobic001G246500 Sobic004G086200--Sobic010G065300 Sobic002G278000--Sobic002G063900 Sobic002G278000--Sobic006G116100 Sobic005G013200 Sobic005G013200 Sobic002G278000--Sobic005G013200 Sobic001G511500 Sobic001G511500 Sobic002G278000--Sobic001G511500 Sobic002G278000--Sobic008G149800 Sobic005G015900 Sobic005G015900 Sobic002G278000--Sobic005G015900 Sobic008G028700 Sobic008G028700 Sobic002G278000--Sobic008G028700 Sobic002G278000--Sobic008G173100 Sobic001G167200 Sobic001G167200 Sobic002G278000--Sobic001G167200 Sobic002G292800 Sobic002G292800 Sobic004G097900--Sobic002G292800 Sobic002G386900 Sobic002G386900 Sobic004G097900--Sobic002G386900 Sobic006G191200 Sobic006G191200 Sobic004G097900--Sobic006G191200 Sobic001G495400 Sobic001G495400 Sobic004G097900--Sobic001G495400 Sobic006G029100 Sobic006G029100 Sobic004G097900--Sobic006G029100 Sobic002G112600 Sobic002G112600 Sobic004G097900--Sobic002G112600 Sobic003G218200 Sobic003G218200 Sobic004G097900--Sobic003G218200 Sobic006G170900 Sobic006G170900 Sobic004G097900--Sobic006G170900 Sobic004G106250 Sobic004G106250 Sobic004G097900--Sobic004G106250 Sobic004G219100 Sobic004G219100 Sobic006G215900--Sobic004G219100 Sobic004G067700 Sobic004G067700 Sobic006G215900--Sobic004G067700 Sobic002G158700 Sobic002G158700 Sobic006G215900--Sobic002G158700 Sobic001G106100 Sobic001G106100 Sobic006G215900--Sobic001G106100 Sobic004G111700 Sobic004G111700 Sobic006G215900--Sobic004G111700 Sobic002G103600 Sobic002G103600 Sobic006G215900--Sobic002G103600 Sobic003G039900 Sobic003G039900 Sobic006G215900--Sobic003G039900 Sobic001G376100 Sobic001G376100 Sobic006G215900--Sobic001G376100 Sobic006G215900--Sobic008G149800
Octagon: transcription factors


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