Gene annotation
Transcriptome id Sobic.002G282500.1
Synonym ATPLDDELTA, Sb02g031540, PLDDELTA
Functional annotation phospholipase D, putative, expressed
UniProt A0A1B6QDV2
Pfam PF00614 PF00168 PF12357
Panther DB PTHR18896 PTHR18896:SF60
NCBI CDD -
KEGG Orthology K01115; phospholipase D1/2
Gene Ontology GO:0003824; catalytic activity GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT4G35790 : phospholipase D delta
RAP-DB (Rice) LOC_Os09g37100.1 : phospholipase D, putative, expressed
MaizeGDB (Corn) Zm00025a014485 , Zm00025a014482 , Zm00025a049289
Brachypodium KQJ91280
Barley HORVU5Hr1G084740.1 , HORVU5Hr1G084740.2 , HORVU5Hr1G084740.3 , HORVU5Hr1G084740.4 , HORVU5Hr1G084740.5 , HORVU5Hr1G084740.6
Wheat TraesCS5D02G341800 , TraesCS5D02G341800 , TraesCS5A02G337100 , TraesCS5A02G337100 , TraesCS5B02G336100 , TraesCS5B02G336100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G278600 FG-GAP repeat-containing protein, putative, expressed -
2 Sobic.004G180900 PSP domain containing protein, expressed K13128: zinc finger CCHC domain-containing protein 8
3 Sobic.007G016900 OsFBL26 - F-box domain and LRR containing protein, expressed -
4 Sobic.004G236800 MAG2, putative, expressed -
5 Sobic.009G040800 helicase, putative, expressed K10844: ERCC2, DNA excision repair protein ERCC-2
6 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
7 Sobic.004G246100 nicalin, putative, expressed K06171: nicastrin
8 Sobic.008G185500 zinc finger, putative, expressed -
9 Sobic.006G281700 DUF803 domain containing, putative, expressed -
10 Sobic.005G106200 expressed protein K10290: F-box protein 3
11 Sobic.002G063900 zinc ion binding protein, putative, expressed -
12 Sobic.009G102000 OsFBX9 - F-box domain containing protein, expressed -
13 Sobic.009G125000 cyclin-dependent kinase C-1, putative, expressed K08819: cyclin-dependent kinase 12/13
14 Sobic.009G260650 - -
15 Sobic.007G056500 cullin, putative, expressed K03869: cullin 3
16 Sobic.001G526300 WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
17 Sobic.003G133900 exonuclease, putative, expressed K18417: ERI1 exoribonuclease 2
18 Sobic.008G149800 histone acetyltransferase HAC5, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
19 Sobic.003G249600 vacuolar protein sorting-associated protein 16, putative, expressed -
20 Sobic.010G033600 BRCA1 C Terminus domain containing protein, expressed K10803: DNA-repair protein XRCC1


Gene co-expression network
sample Sobic002G282500 Sobic002G282500 Sobic010G278600 Sobic010G278600 Sobic002G282500--Sobic010G278600 Sobic004G180900 Sobic004G180900 Sobic002G282500--Sobic004G180900 Sobic007G016900 Sobic007G016900 Sobic002G282500--Sobic007G016900 Sobic004G236800 Sobic004G236800 Sobic002G282500--Sobic004G236800 Sobic009G040800 Sobic009G040800 Sobic002G282500--Sobic009G040800 Sobic004G122900 Sobic004G122900 Sobic002G282500--Sobic004G122900 Sobic004G246100 Sobic004G246100 Sobic002G282500--Sobic004G246100 Sobic008G185500 Sobic008G185500 Sobic002G282500--Sobic008G185500 Sobic006G281700 Sobic006G281700 Sobic002G282500--Sobic006G281700 Sobic010G278600--Sobic009G040800 Sobic009G074700 Sobic009G074700 Sobic010G278600--Sobic009G074700 Sobic002G408600 Sobic002G408600 Sobic010G278600--Sobic002G408600 Sobic004G285000 Sobic004G285000 Sobic010G278600--Sobic004G285000 Sobic010G278600--Sobic004G236800 Sobic010G278600--Sobic004G246100 Sobic001G042200 Sobic001G042200 Sobic010G278600--Sobic001G042200 Sobic006G131200 Sobic006G131200 Sobic010G278600--Sobic006G131200 Sobic001G393700 Sobic001G393700 Sobic010G278600--Sobic001G393700 Sobic009G017200 Sobic009G017200 Sobic004G180900--Sobic009G017200 Sobic007G056500 Sobic007G056500 Sobic004G180900--Sobic007G056500 Sobic001G425000 Sobic001G425000 Sobic004G180900--Sobic001G425000 Sobic004G345400 Sobic004G345400 Sobic004G180900--Sobic004G345400 Sobic006G186400 Sobic006G186400 Sobic004G180900--Sobic006G186400 Sobic008G058800 Sobic008G058800 Sobic004G180900--Sobic008G058800 Sobic007G026000 Sobic007G026000 Sobic004G180900--Sobic007G026000 Sobic010G077500 Sobic010G077500 Sobic004G180900--Sobic010G077500 Sobic003G381600 Sobic003G381600 Sobic004G180900--Sobic003G381600 Sobic006G245900 Sobic006G245900 Sobic007G016900--Sobic006G245900 Sobic007G187600 Sobic007G187600 Sobic007G016900--Sobic007G187600 Sobic003G413100 Sobic003G413100 Sobic007G016900--Sobic003G413100 Sobic003G010900 Sobic003G010900 Sobic007G016900--Sobic003G010900 Sobic007G016900--Sobic004G345400 Sobic007G016900--Sobic001G042200 Sobic002G343200 Sobic002G343200 Sobic007G016900--Sobic002G343200 Sobic003G113300 Sobic003G113300 Sobic007G016900--Sobic003G113300 Sobic007G016900--Sobic009G040800 Sobic004G141800 Sobic004G141800 Sobic004G236800--Sobic004G141800 Sobic002G430300 Sobic002G430300 Sobic004G236800--Sobic002G430300 Sobic003G405500 Sobic003G405500 Sobic004G236800--Sobic003G405500 Sobic003G152400 Sobic003G152400 Sobic004G236800--Sobic003G152400 Sobic002G063900 Sobic002G063900 Sobic004G236800--Sobic002G063900 Sobic004G236800--Sobic010G278600 Sobic004G236800--Sobic004G246100 Sobic010G187600 Sobic010G187600 Sobic004G236800--Sobic010G187600 Sobic001G145400 Sobic001G145400 Sobic004G236800--Sobic001G145400 Sobic009G040800--Sobic010G278600 Sobic006G091000 Sobic006G091000 Sobic009G040800--Sobic006G091000 Sobic005G040900 Sobic005G040900 Sobic009G040800--Sobic005G040900 Sobic009G129600 Sobic009G129600 Sobic009G040800--Sobic009G129600 Sobic001G335900 Sobic001G335900 Sobic009G040800--Sobic001G335900 Sobic008G149800 Sobic008G149800 Sobic009G040800--Sobic008G149800 Sobic009G040800--Sobic004G246100 Sobic009G040800--Sobic001G042200 Sobic004G353400 Sobic004G353400 Sobic009G040800--Sobic004G353400 Sobic003G181700 Sobic003G181700 Sobic004G122900--Sobic003G181700 Sobic009G122500 Sobic009G122500 Sobic004G122900--Sobic009G122500 Sobic009G194000 Sobic009G194000 Sobic004G122900--Sobic009G194000 Sobic001G156900 Sobic001G156900 Sobic004G122900--Sobic001G156900 Sobic001G043200 Sobic001G043200 Sobic004G122900--Sobic001G043200 Sobic001G335000 Sobic001G335000 Sobic004G122900--Sobic001G335000 Sobic001G308400 Sobic001G308400 Sobic004G122900--Sobic001G308400 Sobic003G021600 Sobic003G021600 Sobic004G122900--Sobic003G021600 Sobic002G227500 Sobic002G227500 Sobic004G122900--Sobic002G227500 Sobic004G246100--Sobic008G149800 Sobic008G153000 Sobic008G153000 Sobic004G246100--Sobic008G153000 Sobic007G061700 Sobic007G061700 Sobic004G246100--Sobic007G061700 Sobic004G246100--Sobic002G063900 Sobic008G173100 Sobic008G173100 Sobic004G246100--Sobic008G173100 Sobic006G116100 Sobic006G116100 Sobic004G246100--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic004G246100--Sobic006G046700 Sobic009G137100 Sobic009G137100 Sobic004G246100--Sobic009G137100 Sobic002G260400 Sobic002G260400 Sobic004G246100--Sobic002G260400 Sobic002G295500 Sobic002G295500 Sobic008G185500--Sobic002G295500 Sobic007G180600 Sobic007G180600 Sobic008G185500--Sobic007G180600 Sobic001G431000 Sobic001G431000 Sobic008G185500--Sobic001G431000 Sobic008G053600 Sobic008G053600 Sobic008G185500--Sobic008G053600 Sobic001G273700 Sobic001G273700 Sobic008G185500--Sobic001G273700 Sobic007G132100 Sobic007G132100 Sobic008G185500--Sobic007G132100 Sobic002G303600 Sobic002G303600 Sobic008G185500--Sobic002G303600 Sobic007G218000 Sobic007G218000 Sobic008G185500--Sobic007G218000 Sobic004G323700 Sobic004G323700 Sobic008G185500--Sobic004G323700 Sobic006G281700--Sobic002G063900 Sobic006G281700--Sobic002G260400 Sobic006G281700--Sobic004G246100 Sobic003G160000 Sobic003G160000 Sobic006G281700--Sobic003G160000 Sobic009G260650 Sobic009G260650 Sobic006G281700--Sobic009G260650 Sobic006G281700--Sobic001G042200 Sobic006G281700--Sobic007G218000 Sobic010G204400 Sobic010G204400 Sobic006G281700--Sobic010G204400 Sobic002G056701 Sobic002G056701 Sobic006G281700--Sobic002G056701
Octagon: transcription factors


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