Gene annotation
Transcriptome id Sobic.002G313700.2,Sobic.002G313700.1
Synonym
Functional annotation mitotic checkpoint serine/threonine-protein kinase BUB1, putative, expressed
UniProt A0A1B6QEF0 , A0A1B6QEE8
Pfam PF00069 PF08311
Panther DB PTHR14030 PTHR14030:SF6
NCBI CDD KOG1166; Mitotic checkpoint serine/threonine protein kinase
KEGG Orthology K02178; checkpoint serine/threonine-protein kinase
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity GO:0007094mitotic spindle assembly checkpoint


Orthologs (automatic annotation)
TAIR AT2G20635 : ATP binding;protein kinases;protein serine/threonine kinases
RAP-DB (Rice) LOC_Os07g32480.1 : mitotic checkpoint serine/threonine-protein kinase BUB1, putative, expressed
MaizeGDB (Corn) Zm00025a036773 , Zm00025a048179 , Zm00025a037449 , Zm00025a041786
Brachypodium -
Barley -
Wheat TraesCS2A02G226000
Populus -


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cDNA sequences
Sobic.002G313700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G074400 OsPDIL1-1 protein disulfide isomerase PDIL1-1, expressed K09580: PDIA1, protein disulfide-isomerase A1
2 Sobic.005G187400 A49-like RNA polymerase I associated factor family protein, expressed K03005: RPA49, DNA-directed RNA polymerase I subunit RPA49
3 Sobic.001G353501 - -
4 Sobic.001G465500 radical SAM enzyme, putative, expressed -
5 Sobic.003G207300 OsFBD3 - F-box and FBD domain containing protein, expressed -
6 Sobic.006G061100 CBS domain containing membrane protein, putative, expressed -
7 Sobic.005G191700 RNA recognition motif containing protein, putative, expressed K13201: TIA1, nucleolysin TIA-1/TIAR
8 Sobic.009G239900 ketol-acid reductoisomerase, chloroplast precursor, putative, expressed K00053: ketol-acid reductoisomerase
9 Sobic.007G042300 expressed protein -
10 Sobic.004G155800 thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed K01652: E2.2.1.6L, ilvB, ilvG, acetolactate synthase I/II/III large subunit
11 Sobic.006G119700 phospholipase C, putative, expressed -
12 Sobic.006G269800 TFIIH basal transcription factor complex p52 subunit, putative, expressed K03144: TFIIH4, GTF2H4, transcription initiation factor TFIIH subunit 4
13 Sobic.001G423300 outer membrane protein, OMP85 family, putative, expressed -
14 Sobic.002G144800 cyclin, putative, expressed K14505: cyclin D3, plant
15 Sobic.010G015900 transcriptional corepressor SEUSS, putative, expressed -
16 Sobic.003G188300 expressed protein -
17 Sobic.009G057900 kelch repeat-containing protein, putative, expressed -
18 Sobic.003G298900 1,3-beta-glucan synthase component, putative, expressed K11000: callose synthase
19 Sobic.006G187500 deoxyribonuclease tatD, putative, expressed K03424: TatD DNase family protein
20 Sobic.002G056000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C-5 cytosine-specific DNA methylase, putative, expressed K00558: DNMT1, DNA (cytosine-5)-methyltransferase 1


Gene co-expression network
sample Sobic002G313700 Sobic002G313700 Sobic005G074400 Sobic005G074400 Sobic002G313700--Sobic005G074400 Sobic005G187400 Sobic005G187400 Sobic002G313700--Sobic005G187400 Sobic001G353501 Sobic001G353501 Sobic002G313700--Sobic001G353501 Sobic001G465500 Sobic001G465500 Sobic002G313700--Sobic001G465500 Sobic003G207300 Sobic003G207300 Sobic002G313700--Sobic003G207300 Sobic006G061100 Sobic006G061100 Sobic002G313700--Sobic006G061100 Sobic005G191700 Sobic005G191700 Sobic002G313700--Sobic005G191700 Sobic009G239900 Sobic009G239900 Sobic002G313700--Sobic009G239900 Sobic007G042300 Sobic007G042300 Sobic002G313700--Sobic007G042300 Sobic004G075700 Sobic004G075700 Sobic005G074400--Sobic004G075700 Sobic002G273000 Sobic002G273000 Sobic005G074400--Sobic002G273000 Sobic003G430100 Sobic003G430100 Sobic005G074400--Sobic003G430100 Sobic004G210000 Sobic004G210000 Sobic005G074400--Sobic004G210000 Sobic005G176875 Sobic005G176875 Sobic005G074400--Sobic005G176875 Sobic001G269650 Sobic001G269650 Sobic005G074400--Sobic001G269650 Sobic006G200901 Sobic006G200901 Sobic005G074400--Sobic006G200901 Sobic009G132650 Sobic009G132650 Sobic005G074400--Sobic009G132650 Sobic008G184500 Sobic008G184500 Sobic005G074400--Sobic008G184500 Sobic001G423300 Sobic001G423300 Sobic005G187400--Sobic001G423300 Sobic009G113100 Sobic009G113100 Sobic005G187400--Sobic009G113100 Sobic001G373000 Sobic001G373000 Sobic005G187400--Sobic001G373000 Sobic002G005000 Sobic002G005000 Sobic005G187400--Sobic002G005000 Sobic001G230500 Sobic001G230500 Sobic005G187400--Sobic001G230500 Sobic004G067400 Sobic004G067400 Sobic005G187400--Sobic004G067400 Sobic003G161800 Sobic003G161800 Sobic005G187400--Sobic003G161800 Sobic001G334100 Sobic001G334100 Sobic005G187400--Sobic001G334100 Sobic001G115500 Sobic001G115500 Sobic005G187400--Sobic001G115500 Sobic001G478700 Sobic001G478700 Sobic001G353501--Sobic001G478700 Sobic002G317600 Sobic002G317600 Sobic001G353501--Sobic002G317600 Sobic007G140500 Sobic007G140500 Sobic001G353501--Sobic007G140500 Sobic001G353501--Sobic002G313700 Sobic010G168000 Sobic010G168000 Sobic001G353501--Sobic010G168000 Sobic001G353501--Sobic005G074400 Sobic005G110526 Sobic005G110526 Sobic001G353501--Sobic005G110526 Sobic001G436300 Sobic001G436300 Sobic001G353501--Sobic001G436300 Sobic005G044100 Sobic005G044100 Sobic001G353501--Sobic005G044100 Sobic008G078000 Sobic008G078000 Sobic001G465500--Sobic008G078000 Sobic002G335500 Sobic002G335500 Sobic001G465500--Sobic002G335500 Sobic004G078500 Sobic004G078500 Sobic001G465500--Sobic004G078500 Sobic003G028400 Sobic003G028400 Sobic001G465500--Sobic003G028400 Sobic002G208400 Sobic002G208400 Sobic001G465500--Sobic002G208400 Sobic004G030400 Sobic004G030400 Sobic001G465500--Sobic004G030400 Sobic003G331000 Sobic003G331000 Sobic001G465500--Sobic003G331000 Sobic003G129300 Sobic003G129300 Sobic001G465500--Sobic003G129300 Sobic001G465500--Sobic001G436300 Sobic010G041000 Sobic010G041000 Sobic003G207300--Sobic010G041000 Sobic007G159200 Sobic007G159200 Sobic003G207300--Sobic007G159200 Sobic004G111000 Sobic004G111000 Sobic003G207300--Sobic004G111000 Sobic002G336200 Sobic002G336200 Sobic003G207300--Sobic002G336200 Sobic003G361400 Sobic003G361400 Sobic003G207300--Sobic003G361400 Sobic001G502600 Sobic001G502600 Sobic003G207300--Sobic001G502600 Sobic004G118800 Sobic004G118800 Sobic003G207300--Sobic004G118800 Sobic002G219900 Sobic002G219900 Sobic003G207300--Sobic002G219900 Sobic003G098900 Sobic003G098900 Sobic003G207300--Sobic003G098900 Sobic006G061100--Sobic004G075700 Sobic003G026900 Sobic003G026900 Sobic006G061100--Sobic003G026900 Sobic009G060300 Sobic009G060300 Sobic006G061100--Sobic009G060300 Sobic010G207400 Sobic010G207400 Sobic006G061100--Sobic010G207400 Sobic006G015500 Sobic006G015500 Sobic006G061100--Sobic006G015500 Sobic004G154300 Sobic004G154300 Sobic006G061100--Sobic004G154300 Sobic006G061100--Sobic009G113100 Sobic004G311400 Sobic004G311400 Sobic006G061100--Sobic004G311400 Sobic006G061100--Sobic009G132650 Sobic006G269800 Sobic006G269800 Sobic005G191700--Sobic006G269800 Sobic005G046900 Sobic005G046900 Sobic005G191700--Sobic005G046900 Sobic002G145800 Sobic002G145800 Sobic005G191700--Sobic002G145800 Sobic001G013300 Sobic001G013300 Sobic005G191700--Sobic001G013300 Sobic003G409200 Sobic003G409200 Sobic005G191700--Sobic003G409200 Sobic008G057000 Sobic008G057000 Sobic005G191700--Sobic008G057000 Sobic003G062300 Sobic003G062300 Sobic005G191700--Sobic003G062300 Sobic001G373400 Sobic001G373400 Sobic005G191700--Sobic001G373400 Sobic002G029100 Sobic002G029100 Sobic005G191700--Sobic002G029100 Sobic002G033500 Sobic002G033500 Sobic009G239900--Sobic002G033500 Sobic006G046300 Sobic006G046300 Sobic009G239900--Sobic006G046300 Sobic009G239900--Sobic006G061100 Sobic009G239900--Sobic004G210000 Sobic009G239900--Sobic007G042300 Sobic001G305100 Sobic001G305100 Sobic009G239900--Sobic001G305100 Sobic003G027350 Sobic003G027350 Sobic009G239900--Sobic003G027350 Sobic009G239900--Sobic005G074400 Sobic006G161300 Sobic006G161300 Sobic009G239900--Sobic006G161300 Sobic010G015900 Sobic010G015900 Sobic007G042300--Sobic010G015900 Sobic007G042300--Sobic006G061100 Sobic003G159500 Sobic003G159500 Sobic007G042300--Sobic003G159500 Sobic007G042300--Sobic009G239900 Sobic007G042300--Sobic004G075700 Sobic001G480550 Sobic001G480550 Sobic007G042300--Sobic001G480550 Sobic006G179600 Sobic006G179600 Sobic007G042300--Sobic006G179600 Sobic007G042300--Sobic001G423300 Sobic007G042300--Sobic009G113100
Octagon: transcription factors


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