Gene annotation
Transcriptome id Sobic.006G119700.1
Synonym
Functional annotation phospholipase C, putative, expressed
UniProt A0A1Z5RDF6
Pfam -
Panther DB PTHR13593 PTHR13593:SF31
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G67130 : PLC-like phosphodiesterases superfamily protein
RAP-DB (Rice) LOC_Os09g02729.1 : phospholipase C, putative, expressed
MaizeGDB (Corn) Zm00025a056291
Brachypodium KQJ86917
Barley HORVU5Hr1G050610.3 , HORVU5Hr1G050610.2 , HORVU5Hr1G050610.1 , HORVU5Hr1G050610.5 , HORVU5Hr1G050610.4
Wheat TraesCS5A02G162100 , TraesCS5D02G166800 , TraesCS5B02G159600
Populus -


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cDNA sequences
Sobic.006G119700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G178400 zinc finger, C3HC4 type domain containing protein, expressed K19039: E3 ubiquitin-protein ligase ATL7/58/59
2 Sobic.001G469200 proteasome subunit, putative, expressed K12178: COPS4, COP9 signalosome complex subunit 4
3 Sobic.003G378400 DUF803 domain containing, putative, expressed -
4 Sobic.002G333100 transmembrane protein, putative, expressed -
5 Sobic.008G013300 expressed protein -
6 Sobic.006G140600 HEAT repeat family protein, putative, expressed K16578: CLIP-associating protein 1/2
7 Sobic.009G151800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
8 Sobic.001G115500 importin-alpha re-exporter, putative, expressed K18423: CSE1, CAS, exportin-2 (importin alpha re-exporter)
9 Sobic.002G355000 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@WRKY87, expressed -
10 Sobic.002G264300 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
11 Sobic.010G108900 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
12 Sobic.001G009800 N-rich protein, putative, expressed -
13 Sobic.008G125100 Mur ligase family protein, putative, expressed -
14 Sobic.002G202000 double-stranded RNA binding motif containing protein, expressed -
15 Sobic.001G222400 tetratricopeptide repeat domain containing protein, expressed -
16 Sobic.006G233300 RNA binding protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
17 Sobic.006G177300 ATFUC1, putative, expressed K01206: alpha-L-fucosidase
18 Sobic.001G540800 DNA binding protein, putative, expressed -
19 Sobic.004G140300 delta14-sterol reductase, putative, expressed K00213: 7-dehydrocholesterol reductase
20 Sobic.004G057100 tubulin-specific chaperone E, putative, expressed -


Gene co-expression network
sample Sobic006G119700 Sobic006G119700 Sobic004G178400 Sobic004G178400 Sobic006G119700--Sobic004G178400 Sobic001G469200 Sobic001G469200 Sobic006G119700--Sobic001G469200 Sobic003G378400 Sobic003G378400 Sobic006G119700--Sobic003G378400 Sobic002G333100 Sobic002G333100 Sobic006G119700--Sobic002G333100 Sobic008G013300 Sobic008G013300 Sobic006G119700--Sobic008G013300 Sobic006G140600 Sobic006G140600 Sobic006G119700--Sobic006G140600 Sobic009G151800 Sobic009G151800 Sobic006G119700--Sobic009G151800 Sobic001G115500 Sobic001G115500 Sobic006G119700--Sobic001G115500 Sobic002G355000 Sobic002G355000 Sobic006G119700--Sobic002G355000 Sobic004G178400--Sobic006G140600 Sobic004G128200 Sobic004G128200 Sobic004G178400--Sobic004G128200 Sobic008G125100 Sobic008G125100 Sobic004G178400--Sobic008G125100 Sobic003G077500 Sobic003G077500 Sobic004G178400--Sobic003G077500 Sobic008G088842 Sobic008G088842 Sobic004G178400--Sobic008G088842 Sobic002G143200 Sobic002G143200 Sobic004G178400--Sobic002G143200 Sobic003G023400 Sobic003G023400 Sobic004G178400--Sobic003G023400 Sobic001G253200 Sobic001G253200 Sobic004G178400--Sobic001G253200 Sobic008G190500 Sobic008G190500 Sobic004G178400--Sobic008G190500 Sobic002G199400 Sobic002G199400 Sobic001G469200--Sobic002G199400 Sobic001G469200--Sobic001G115500 Sobic001G085800 Sobic001G085800 Sobic001G469200--Sobic001G085800 Sobic005G115500 Sobic005G115500 Sobic001G469200--Sobic005G115500 Sobic003G132000 Sobic003G132000 Sobic001G469200--Sobic003G132000 Sobic004G075200 Sobic004G075200 Sobic001G469200--Sobic004G075200 Sobic010G108900 Sobic010G108900 Sobic001G469200--Sobic010G108900 Sobic006G245700 Sobic006G245700 Sobic001G469200--Sobic006G245700 Sobic001G487100 Sobic001G487100 Sobic001G469200--Sobic001G487100 Sobic001G462200 Sobic001G462200 Sobic003G378400--Sobic001G462200 Sobic001G486700 Sobic001G486700 Sobic003G378400--Sobic001G486700 Sobic002G428800 Sobic002G428800 Sobic003G378400--Sobic002G428800 Sobic001G279900 Sobic001G279900 Sobic003G378400--Sobic001G279900 Sobic008G118900 Sobic008G118900 Sobic003G378400--Sobic008G118900 Sobic004G290000 Sobic004G290000 Sobic003G378400--Sobic004G290000 Sobic008G135200 Sobic008G135200 Sobic003G378400--Sobic008G135200 Sobic006G238700 Sobic006G238700 Sobic003G378400--Sobic006G238700 Sobic008G103800 Sobic008G103800 Sobic003G378400--Sobic008G103800 Sobic003G420900 Sobic003G420900 Sobic002G333100--Sobic003G420900 Sobic002G333100--Sobic010G108900 Sobic006G168400 Sobic006G168400 Sobic002G333100--Sobic006G168400 Sobic002G244500 Sobic002G244500 Sobic002G333100--Sobic002G244500 Sobic001G376700 Sobic001G376700 Sobic002G333100--Sobic001G376700 Sobic004G296800 Sobic004G296800 Sobic002G333100--Sobic004G296800 Sobic003G265500 Sobic003G265500 Sobic002G333100--Sobic003G265500 Sobic009G124000 Sobic009G124000 Sobic002G333100--Sobic009G124000 Sobic001G463500 Sobic001G463500 Sobic002G333100--Sobic001G463500 Sobic002G297600 Sobic002G297600 Sobic008G013300--Sobic002G297600 Sobic008G013300--Sobic001G115500 Sobic003G361400 Sobic003G361400 Sobic008G013300--Sobic003G361400 Sobic002G318600 Sobic002G318600 Sobic008G013300--Sobic002G318600 Sobic007G010900 Sobic007G010900 Sobic008G013300--Sobic007G010900 Sobic009G073400 Sobic009G073400 Sobic008G013300--Sobic009G073400 Sobic003G259600 Sobic003G259600 Sobic008G013300--Sobic003G259600 Sobic002G264300 Sobic002G264300 Sobic008G013300--Sobic002G264300 Sobic008G040700 Sobic008G040700 Sobic008G013300--Sobic008G040700 Sobic006G140600--Sobic008G088842 Sobic006G140600--Sobic002G143200 Sobic001G385400 Sobic001G385400 Sobic006G140600--Sobic001G385400 Sobic010G138900 Sobic010G138900 Sobic006G140600--Sobic010G138900 Sobic006G208400 Sobic006G208400 Sobic006G140600--Sobic006G208400 Sobic001G315400 Sobic001G315400 Sobic006G140600--Sobic001G315400 Sobic003G435500 Sobic003G435500 Sobic006G140600--Sobic003G435500 Sobic006G140600--Sobic004G178400 Sobic006G033101 Sobic006G033101 Sobic006G140600--Sobic006G033101 Sobic009G081500 Sobic009G081500 Sobic009G151800--Sobic009G081500 Sobic001G460500 Sobic001G460500 Sobic009G151800--Sobic001G460500 Sobic009G151800--Sobic002G264300 Sobic009G151800--Sobic003G259600 Sobic009G151800--Sobic004G075200 Sobic002G356600 Sobic002G356600 Sobic009G151800--Sobic002G356600 Sobic004G356200 Sobic004G356200 Sobic009G151800--Sobic004G356200 Sobic005G031000 Sobic005G031000 Sobic009G151800--Sobic005G031000 Sobic006G157000 Sobic006G157000 Sobic009G151800--Sobic006G157000 Sobic008G125000 Sobic008G125000 Sobic001G115500--Sobic008G125000 Sobic001G008500 Sobic001G008500 Sobic001G115500--Sobic001G008500 Sobic003G008600 Sobic003G008600 Sobic001G115500--Sobic003G008600 Sobic004G249300 Sobic004G249300 Sobic001G115500--Sobic004G249300 Sobic009G102900 Sobic009G102900 Sobic001G115500--Sobic009G102900 Sobic002G208400 Sobic002G208400 Sobic001G115500--Sobic002G208400 Sobic001G115500--Sobic002G264300 Sobic001G436300 Sobic001G436300 Sobic001G115500--Sobic001G436300 Sobic001G373000 Sobic001G373000 Sobic001G115500--Sobic001G373000 Sobic007G191700 Sobic007G191700 Sobic002G355000--Sobic007G191700 Sobic007G091600 Sobic007G091600 Sobic002G355000--Sobic007G091600 Sobic007G183300 Sobic007G183300 Sobic002G355000--Sobic007G183300 Sobic006G118700 Sobic006G118700 Sobic002G355000--Sobic006G118700 Sobic005G015450 Sobic005G015450 Sobic002G355000--Sobic005G015450 Sobic009G195200 Sobic009G195200 Sobic002G355000--Sobic009G195200 Sobic009G164000 Sobic009G164000 Sobic002G355000--Sobic009G164000 Sobic001G395100 Sobic001G395100 Sobic002G355000--Sobic001G395100 Sobic001G507400 Sobic001G507400 Sobic002G355000--Sobic001G507400
Octagon: transcription factors


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