Gene annotation
Transcriptome id Sobic.003G158300.4,Sobic.003G158300.3,Sobic.003G158300.2
Synonym MFP2, Sb03g013790, ATMFP2
Functional annotation 3-hydroxyacyl-CoA dehydrogenase, putative, expressed
UniProt A0A1B6Q3G1 , A0A1B6Q3H8 , A0A1B6Q3L7
Pfam PF00378 PF00725 PF02737 PF16113 PF00725 PF02737
Panther DB PTHR23309 PTHR23309:SF23
NCBI CDD KOG1683; Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase
KEGG Orthology K10527; enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
Gene Ontology GO:0016491; oxidoreductase activity GO:0006631fatty acid metabolic process GO:00038573-hydroxyacyl-CoA dehydrogenase activity GO:0008152metabolic process GO:0003824catalytic activity GO:0016491oxidoreductase activity GO:0006631fatty acid metabolic process GO:00038573-hydroxyacyl-CoA dehydrogenase activity


Orthologs (automatic annotation)
TAIR AT3G06860 : multifunctional protein 2
RAP-DB (Rice) LOC_Os01g24680.1 : 3-hydroxyacyl-CoA dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a036166
Brachypodium KQJ89886
Barley HORVU2Hr1G070450.16 , HORVU2Hr1G070450.17 , HORVU2Hr1G070450.14 , HORVU2Hr1G070450.15 , HORVU2Hr1G070450.12 , HORVU2Hr1G070450.13 , HORVU2Hr1G070450.10 , HORVU2Hr1G070450.11 , HORVU2Hr1G070450.18 , HORVU2Hr1G070450.19 , HORVU2Hr1G070450.23 , HORVU2Hr1G070450.22 , HORVU2Hr1G070450.5 , HORVU2Hr1G070450.1 , HORVU2Hr1G070450.21 , HORVU2Hr1G070450.20 , HORVU2Hr1G070450.4 , HORVU2Hr1G070450.6 , HORVU2Hr1G070450.7 , HORVU2Hr1G070450.2 , HORVU2Hr1G070450.3 , HORVU2Hr1G070450.8 , HORVU2Hr1G070450.9 , HORVU1Hr1G027810.3 , HORVU1Hr1G027810.2 , HORVU1Hr1G027810.1 , HORVU1Hr1G027810.7 , HORVU1Hr1G027810.6 , HORVU1Hr1G027810.5 , HORVU1Hr1G027810.4 , HORVU1Hr1G027810.9 , HORVU1Hr1G027810.8 , HORVU1Hr1G027810.31 , HORVU1Hr1G027810.30 , HORVU1Hr1G027810.33 , HORVU1Hr1G027810.32 , HORVU3Hr1G015590.9 , HORVU3Hr1G015590.8 , HORVU3Hr1G015590.5 , HORVU3Hr1G015590.4 , HORVU3Hr1G015590.7 , HORVU3Hr1G015590.6 , HORVU3Hr1G015590.1 , HORVU3Hr1G015590.3 , HORVU3Hr1G015590.2 , HORVU6Hr1G021980.8 , HORVU6Hr1G021980.9 , HORVU6Hr1G021980.1 , HORVU6Hr1G021980.2 , HORVU6Hr1G021980.3 , HORVU6Hr1G021980.4 , HORVU6Hr1G021980.5 , HORVU6Hr1G021980.6 , HORVU6Hr1G021980.7 , HORVU6Hr1G021980.12 , HORVU6Hr1G021980.13 , HORVU6Hr1G021980.10 , HORVU6Hr1G021980.11 , HORVU6Hr1G021980.16 , HORVU6Hr1G021980.17 , HORVU6Hr1G021980.14 , HORVU6Hr1G021980.15 , HORVU6Hr1G021980.18 , HORVU6Hr1G021980.19 , HORVU1Hr1G027810.28 , HORVU1Hr1G027810.29 , HORVU1Hr1G027810.22 , HORVU1Hr1G027810.23 , HORVU1Hr1G027810.20 , HORVU1Hr1G027810.21 , HORVU1Hr1G027810.26 , HORVU1Hr1G027810.27 , HORVU1Hr1G027810.24 , HORVU1Hr1G027810.25 , HORVU6Hr1G021980.28 , HORVU6Hr1G021980.23 , HORVU6Hr1G021980.22 , HORVU6Hr1G021980.21 , HORVU6Hr1G021980.24 , HORVU3Hr1G015590.18 , HORVU3Hr1G015590.11 , HORVU3Hr1G015590.10 , HORVU3Hr1G015590.13 , HORVU3Hr1G015590.12 , HORVU3Hr1G015590.15 , HORVU3Hr1G015590.14 , HORVU3Hr1G015590.17 , HORVU3Hr1G015590.16 , HORVU1Hr1G027810.18 , HORVU1Hr1G027810.13 , HORVU1Hr1G027810.12 , HORVU1Hr1G027810.11 , HORVU1Hr1G027810.10 , HORVU1Hr1G027810.17 , HORVU1Hr1G027810.16 , HORVU1Hr1G027810.15 , HORVU1Hr1G027810.14 , HORVU1Hr1G027810.19
Wheat TraesCS3D02G086900 , TraesCS3D02G086900 , TraesCS3D02G086900 , TraesCS3A02G086700 , TraesCS3A02G086700 , TraesCS3A02G086700 , TraesCS3A02G086700 , TraesCS3B02G102100 , TraesCS3B02G102100
Populus -


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cDNA sequences
Sobic.003G158300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G409800 xylose isomerase, putative, expressed K01805: xylose isomerase
2 Sobic.002G189400 AMP-binding enzyme, putative, expressed -
3 Sobic.001G414900 expressed protein -
4 Sobic.004G127700 alpha-1,2-fucosidase, putative, expressed K15923: AXY8, FUC95A, alpha-L-fucosidase 2
5 Sobic.002G392700 FGGY family of carbohydrate kinases, putative, expressed K00854: xylB, xylulokinase
6 Sobic.010G205500 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
7 Sobic.001G233700 transmembrane protein-related, putative, expressed -
8 Sobic.010G112300 aluminum-activated malate transporter, putative, expressed -
9 Sobic.002G409900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@spo0B-associated GTP-binding protein, putative, expressed -
10 Sobic.003G345900 histone deacetylase, putative, expressed -
11 Sobic.010G228500 rab geranylgeranyl transferase like protein, putative, expressed K14050: geranylgeranyl transferase type-2 subunit alpha
12 Sobic.002G308500 peptide-Nasparagine amidase, putative, expressed K01456: E3.5.1.52, NGLY1, peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase
13 Sobic.006G083300 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K18995: ATP-dependent RNA helicase DHX29
14 Sobic.008G167800 heat shock protein DnaJ, putative, expressed K09534: DnaJ homolog subfamily C member 14
15 Sobic.007G077900 zinc finger domain, LSD1 subclass family protein, expressed -
16 Sobic.002G415900 acyl-CoA dehydrogenase family member 10, putative, expressed K00249: ACADM, acyl-CoA dehydrogenase
17 Sobic.001G214600 expressed protein -
18 Sobic.008G017800 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
19 Sobic.002G403500 tetratricopeptide-like helical, putative, expressed -
20 Sobic.001G111150 - K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4


Gene co-expression network
sample Sobic003G158300 Sobic003G158300 Sobic002G409800 Sobic002G409800 Sobic003G158300--Sobic002G409800 Sobic002G189400 Sobic002G189400 Sobic003G158300--Sobic002G189400 Sobic001G414900 Sobic001G414900 Sobic003G158300--Sobic001G414900 Sobic004G127700 Sobic004G127700 Sobic003G158300--Sobic004G127700 Sobic002G392700 Sobic002G392700 Sobic003G158300--Sobic002G392700 Sobic010G205500 Sobic010G205500 Sobic003G158300--Sobic010G205500 Sobic001G233700 Sobic001G233700 Sobic003G158300--Sobic001G233700 Sobic010G112300 Sobic010G112300 Sobic003G158300--Sobic010G112300 Sobic002G409900 Sobic002G409900 Sobic003G158300--Sobic002G409900 Sobic009G213100 Sobic009G213100 Sobic002G409800--Sobic009G213100 Sobic002G409800--Sobic003G158300 Sobic002G076000 Sobic002G076000 Sobic002G409800--Sobic002G076000 Sobic002G409800--Sobic002G392700 Sobic002G409800--Sobic002G189400 Sobic001G017600 Sobic001G017600 Sobic002G409800--Sobic001G017600 Sobic010G083000 Sobic010G083000 Sobic002G409800--Sobic010G083000 Sobic009G055400 Sobic009G055400 Sobic002G409800--Sobic009G055400 Sobic001G507900 Sobic001G507900 Sobic002G409800--Sobic001G507900 Sobic010G228500 Sobic010G228500 Sobic002G189400--Sobic010G228500 Sobic004G339100 Sobic004G339100 Sobic002G189400--Sobic004G339100 Sobic006G083600 Sobic006G083600 Sobic002G189400--Sobic006G083600 Sobic009G148300 Sobic009G148300 Sobic002G189400--Sobic009G148300 Sobic007G202600 Sobic007G202600 Sobic002G189400--Sobic007G202600 Sobic004G113400 Sobic004G113400 Sobic002G189400--Sobic004G113400 Sobic002G189400--Sobic004G127700 Sobic008G099800 Sobic008G099800 Sobic002G189400--Sobic008G099800 Sobic002G111600 Sobic002G111600 Sobic002G189400--Sobic002G111600 Sobic001G414900--Sobic003G158300 Sobic001G453000 Sobic001G453000 Sobic001G414900--Sobic001G453000 Sobic010G089800 Sobic010G089800 Sobic001G414900--Sobic010G089800 Sobic003G294600 Sobic003G294600 Sobic001G414900--Sobic003G294600 Sobic006G036100 Sobic006G036100 Sobic001G414900--Sobic006G036100 Sobic007G077900 Sobic007G077900 Sobic001G414900--Sobic007G077900 Sobic002G308500 Sobic002G308500 Sobic001G414900--Sobic002G308500 Sobic009G142000 Sobic009G142000 Sobic001G414900--Sobic009G142000 Sobic002G009300 Sobic002G009300 Sobic001G414900--Sobic002G009300 Sobic003G233600 Sobic003G233600 Sobic004G127700--Sobic003G233600 Sobic009G094300 Sobic009G094300 Sobic004G127700--Sobic009G094300 Sobic004G127700--Sobic002G308500 Sobic004G127700--Sobic004G339100 Sobic001G120300 Sobic001G120300 Sobic004G127700--Sobic001G120300 Sobic001G111150 Sobic001G111150 Sobic004G127700--Sobic001G111150 Sobic009G139900 Sobic009G139900 Sobic004G127700--Sobic009G139900 Sobic009G057300 Sobic009G057300 Sobic004G127700--Sobic009G057300 Sobic004G136300 Sobic004G136300 Sobic004G127700--Sobic004G136300 Sobic002G392700--Sobic002G189400 Sobic010G106900 Sobic010G106900 Sobic002G392700--Sobic010G106900 Sobic001G389800 Sobic001G389800 Sobic002G392700--Sobic001G389800 Sobic002G392700--Sobic002G409800 Sobic006G281500 Sobic006G281500 Sobic002G392700--Sobic006G281500 Sobic010G017800 Sobic010G017800 Sobic002G392700--Sobic010G017800 Sobic004G325400 Sobic004G325400 Sobic002G392700--Sobic004G325400 Sobic010G249300 Sobic010G249300 Sobic002G392700--Sobic010G249300 Sobic002G317300 Sobic002G317300 Sobic002G392700--Sobic002G317300 Sobic001G474500 Sobic001G474500 Sobic010G205500--Sobic001G474500 Sobic007G068100 Sobic007G068100 Sobic010G205500--Sobic007G068100 Sobic004G266400 Sobic004G266400 Sobic010G205500--Sobic004G266400 Sobic003G388251 Sobic003G388251 Sobic010G205500--Sobic003G388251 Sobic001G176600 Sobic001G176600 Sobic010G205500--Sobic001G176600 Sobic010G205500--Sobic001G111150 Sobic003G100800 Sobic003G100800 Sobic010G205500--Sobic003G100800 Sobic010G251200 Sobic010G251200 Sobic010G205500--Sobic010G251200 Sobic009G034700 Sobic009G034700 Sobic010G205500--Sobic009G034700 Sobic008G177200 Sobic008G177200 Sobic001G233700--Sobic008G177200 Sobic004G018100 Sobic004G018100 Sobic001G233700--Sobic004G018100 Sobic002G179900 Sobic002G179900 Sobic001G233700--Sobic002G179900 Sobic009G243800 Sobic009G243800 Sobic001G233700--Sobic009G243800 Sobic001G233700--Sobic010G112300 Sobic001G443900 Sobic001G443900 Sobic001G233700--Sobic001G443900 Sobic004G236400 Sobic004G236400 Sobic001G233700--Sobic004G236400 Sobic007G161800 Sobic007G161800 Sobic001G233700--Sobic007G161800 Sobic003G259100 Sobic003G259100 Sobic001G233700--Sobic003G259100 Sobic002G270500 Sobic002G270500 Sobic010G112300--Sobic002G270500 Sobic001G207400 Sobic001G207400 Sobic010G112300--Sobic001G207400 Sobic003G428400 Sobic003G428400 Sobic010G112300--Sobic003G428400 Sobic010G112300--Sobic004G113400 Sobic002G430000 Sobic002G430000 Sobic010G112300--Sobic002G430000 Sobic010G205200 Sobic010G205200 Sobic010G112300--Sobic010G205200 Sobic008G167800 Sobic008G167800 Sobic010G112300--Sobic008G167800 Sobic004G355000 Sobic004G355000 Sobic010G112300--Sobic004G355000 Sobic010G112300--Sobic009G094300 Sobic001G445200 Sobic001G445200 Sobic002G409900--Sobic001G445200 Sobic005G009300 Sobic005G009300 Sobic002G409900--Sobic005G009300 Sobic007G027000 Sobic007G027000 Sobic002G409900--Sobic007G027000 Sobic002G156100 Sobic002G156100 Sobic002G409900--Sobic002G156100 Sobic003G345900 Sobic003G345900 Sobic002G409900--Sobic003G345900 Sobic001G293300 Sobic001G293300 Sobic002G409900--Sobic001G293300 Sobic003G162800 Sobic003G162800 Sobic002G409900--Sobic003G162800 Sobic002G409900--Sobic003G158300 Sobic002G404900 Sobic002G404900 Sobic002G409900--Sobic002G404900
Octagon: transcription factors


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