Gene annotation
Transcriptome id Sobic.003G198600.1
Synonym
Functional annotation -
UniProt C5XNV5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G111400 membrane protein, putative, expressed -
2 Sobic.010G166500 amino acid transporter, putative, expressed -
3 Sobic.001G066700 GLTP domain containing protein, putative, expressed -
4 Sobic.004G341100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsFBX70 - F-box domain containing protein, expressed -
5 Sobic.002G384700 40S ribosomal protein S9-2, putative, expressed K02997: RP-S9e, small subunit ribosomal protein S9e
6 Sobic.002G323300 ankyrin repeat family protein, putative, expressed -
7 Sobic.002G329800 expressed protein -
8 Sobic.003G418500 OsGrx_C6 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
9 Sobic.010G205400 ribosomal protein, putative, expressed K02955: RP-S14e, small subunit ribosomal protein S14e
10 Sobic.001G400900 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
11 Sobic.005G179500 OsFBX291 - F-box domain containing protein, expressed -
12 Sobic.007G161700 expressed protein K17769: mitochondrial import receptor subunit TOM22
13 Sobic.003G202500 methyltransferase, putative, expressed -
14 Sobic.004G063500 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
15 Sobic.002G296200 expressed protein -
16 Sobic.001G286300 - -
17 Sobic.010G063801 - K02924: RP-L39e, large subunit ribosomal protein L39e
18 Sobic.005G177600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
19 Sobic.007G053300 40S ribosomal protein S3-1, putative, expressed K02985: RP-S3e, small subunit ribosomal protein S3e
20 Sobic.001G128400 peptidase, T1 family, putative, expressed K02734: 20S proteasome subunit beta 4


Gene co-expression network
sample Sobic003G198600 Sobic003G198600 Sobic008G111400 Sobic008G111400 Sobic003G198600--Sobic008G111400 Sobic010G166500 Sobic010G166500 Sobic003G198600--Sobic010G166500 Sobic001G066700 Sobic001G066700 Sobic003G198600--Sobic001G066700 Sobic004G341100 Sobic004G341100 Sobic003G198600--Sobic004G341100 Sobic002G384700 Sobic002G384700 Sobic003G198600--Sobic002G384700 Sobic002G323300 Sobic002G323300 Sobic003G198600--Sobic002G323300 Sobic002G329800 Sobic002G329800 Sobic003G198600--Sobic002G329800 Sobic003G418500 Sobic003G418500 Sobic003G198600--Sobic003G418500 Sobic010G205400 Sobic010G205400 Sobic003G198600--Sobic010G205400 Sobic001G128400 Sobic001G128400 Sobic008G111400--Sobic001G128400 Sobic010G154700 Sobic010G154700 Sobic008G111400--Sobic010G154700 Sobic009G122100 Sobic009G122100 Sobic008G111400--Sobic009G122100 Sobic001G286300 Sobic001G286300 Sobic008G111400--Sobic001G286300 Sobic003G350300 Sobic003G350300 Sobic008G111400--Sobic003G350300 Sobic002G116200 Sobic002G116200 Sobic008G111400--Sobic002G116200 Sobic008G189300 Sobic008G189300 Sobic008G111400--Sobic008G189300 Sobic007G096700 Sobic007G096700 Sobic008G111400--Sobic007G096700 Sobic001G132100 Sobic001G132100 Sobic008G111400--Sobic001G132100 Sobic002G389400 Sobic002G389400 Sobic010G166500--Sobic002G389400 Sobic001G112200 Sobic001G112200 Sobic010G166500--Sobic001G112200 Sobic009G069800 Sobic009G069800 Sobic010G166500--Sobic009G069800 Sobic002G302500 Sobic002G302500 Sobic010G166500--Sobic002G302500 Sobic004G321300 Sobic004G321300 Sobic010G166500--Sobic004G321300 Sobic010G274900 Sobic010G274900 Sobic010G166500--Sobic010G274900 Sobic003G364300 Sobic003G364300 Sobic010G166500--Sobic003G364300 Sobic010G156500 Sobic010G156500 Sobic010G166500--Sobic010G156500 Sobic001G477600 Sobic001G477600 Sobic010G166500--Sobic001G477600 Sobic003G358300 Sobic003G358300 Sobic001G066700--Sobic003G358300 Sobic003G403400 Sobic003G403400 Sobic001G066700--Sobic003G403400 Sobic002G218000 Sobic002G218000 Sobic001G066700--Sobic002G218000 Sobic005G111100 Sobic005G111100 Sobic001G066700--Sobic005G111100 Sobic009G191600 Sobic009G191600 Sobic001G066700--Sobic009G191600 Sobic010G266300 Sobic010G266300 Sobic001G066700--Sobic010G266300 Sobic003G233500 Sobic003G233500 Sobic001G066700--Sobic003G233500 Sobic010G225300 Sobic010G225300 Sobic001G066700--Sobic010G225300 Sobic009G070200 Sobic009G070200 Sobic001G066700--Sobic009G070200 Sobic004G026400 Sobic004G026400 Sobic004G341100--Sobic004G026400 Sobic003G150000 Sobic003G150000 Sobic004G341100--Sobic003G150000 Sobic004G340900 Sobic004G340900 Sobic004G341100--Sobic004G340900 Sobic002G196350 Sobic002G196350 Sobic004G341100--Sobic002G196350 Sobic004G351500 Sobic004G351500 Sobic004G341100--Sobic004G351500 Sobic002G040600 Sobic002G040600 Sobic004G341100--Sobic002G040600 Sobic008G097401 Sobic008G097401 Sobic004G341100--Sobic008G097401 Sobic003G264600 Sobic003G264600 Sobic004G341100--Sobic003G264600 Sobic002G378401 Sobic002G378401 Sobic004G341100--Sobic002G378401 Sobic008G172600 Sobic008G172600 Sobic002G384700--Sobic008G172600 Sobic004G045400 Sobic004G045400 Sobic002G384700--Sobic004G045400 Sobic008G027600 Sobic008G027600 Sobic002G384700--Sobic008G027600 Sobic001G114900 Sobic001G114900 Sobic002G384700--Sobic001G114900 Sobic006G158400 Sobic006G158400 Sobic002G384700--Sobic006G158400 Sobic010G211600 Sobic010G211600 Sobic002G384700--Sobic010G211600 Sobic003G060000 Sobic003G060000 Sobic002G384700--Sobic003G060000 Sobic002G366600 Sobic002G366600 Sobic002G384700--Sobic002G366600 Sobic002G384700--Sobic010G205400 Sobic002G323300--Sobic009G069800 Sobic004G336500 Sobic004G336500 Sobic002G323300--Sobic004G336500 Sobic001G115300 Sobic001G115300 Sobic002G323300--Sobic001G115300 Sobic002G323300--Sobic002G389400 Sobic004G169300 Sobic004G169300 Sobic002G323300--Sobic004G169300 Sobic002G323300--Sobic010G166500 Sobic003G367200 Sobic003G367200 Sobic002G323300--Sobic003G367200 Sobic001G280800 Sobic001G280800 Sobic002G323300--Sobic001G280800 Sobic002G323300--Sobic004G321300 Sobic002G203700 Sobic002G203700 Sobic002G329800--Sobic002G203700 Sobic004G203700 Sobic004G203700 Sobic002G329800--Sobic004G203700 Sobic002G329800--Sobic002G389400 Sobic003G084400 Sobic003G084400 Sobic002G329800--Sobic003G084400 Sobic002G329800--Sobic010G156500 Sobic009G231000 Sobic009G231000 Sobic002G329800--Sobic009G231000 Sobic005G183100 Sobic005G183100 Sobic002G329800--Sobic005G183100 Sobic009G159400 Sobic009G159400 Sobic002G329800--Sobic009G159400 Sobic010G213700 Sobic010G213700 Sobic002G329800--Sobic010G213700 Sobic002G042000 Sobic002G042000 Sobic003G418500--Sobic002G042000 Sobic006G101300 Sobic006G101300 Sobic003G418500--Sobic006G101300 Sobic005G177600 Sobic005G177600 Sobic003G418500--Sobic005G177600 Sobic008G158800 Sobic008G158800 Sobic003G418500--Sobic008G158800 Sobic006G234900 Sobic006G234900 Sobic003G418500--Sobic006G234900 Sobic003G418500--Sobic004G169300 Sobic003G418500--Sobic003G364300 Sobic003G418500--Sobic010G156500 Sobic002G010900 Sobic002G010900 Sobic003G418500--Sobic002G010900 Sobic003G408100 Sobic003G408100 Sobic010G205400--Sobic003G408100 Sobic006G047400 Sobic006G047400 Sobic010G205400--Sobic006G047400 Sobic001G054900 Sobic001G054900 Sobic010G205400--Sobic001G054900 Sobic010G205400--Sobic004G045400 Sobic010G206200 Sobic010G206200 Sobic010G205400--Sobic010G206200 Sobic001G036900 Sobic001G036900 Sobic010G205400--Sobic001G036900 Sobic001G018900 Sobic001G018900 Sobic010G205400--Sobic001G018900 Sobic009G163800 Sobic009G163800 Sobic010G205400--Sobic009G163800 Sobic009G215200 Sobic009G215200 Sobic010G205400--Sobic009G215200
Octagon: transcription factors


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