Gene annotation
| Transcriptome id | Sobic.003G230700.1 |
|---|---|
| Synonym | KING1, Sb03g028870 |
| Functional annotation | Up-reguralion under drought (PubMedID : 24916767) CBS domain containing membrane protein, putative, expressed |
| UniProt | A0A1B6Q4U4 |
| Pfam | PF00571 |
| Panther DB | PTHR13780 PTHR13780:SF22 |
| NCBI CDD | KOG1764; 5'-AMP-activated protein kinase, gamma subunit |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT3G48530 : SNF1-related protein kinase regulatory subunit gamma 1 |
|---|---|
| RAP-DB (Rice) | LOC_Os01g44250.1 : CBS domain containing membrane protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a028311 |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.006G119600 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@GRAM and C2 domains containing protein, putative, expressed | - |
| 2 | Sobic.001G424400 | similar to Putative uncharacterized protein(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Negative regulator of ABA(PubMedID : 30367619)@protein phosphatase 2C, putative, expressed | K14497: protein phosphatase 2C |
| 3 | Sobic.009G118600 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@eukaryotic peptide chain release factor subunit 1-1, putative, expressed | K03265: ETF1, peptide chain release factor subunit 1 |
| 4 | Sobic.001G520500 | CS domain containing protein, putative, expressed | - |
| 5 | Sobic.003G011000 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@AAA-type ATPase family protein, putative, expressed | - |
| 6 | Sobic.010G011900 | expressed protein | - |
| 7 | Sobic.006G272700 | Up-reguralion under drought(PubMedID : 24916767)@expressed protein | - |
| 8 | Sobic.001G027800 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@OsMan05 - Endo-Beta-Mannanase, expressed | K19355: mannan endo-1,4-beta-mannosidase |
| 9 | Sobic.006G034300 | Transketolase(PubMedID : 26186930)@"Transketolase, putative (Os)"(PubMedID : 27208977)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@transketolase, chloroplast precursor, putative, expressed | K00615: E2.2.1.1, tktA, transketolase |
| 10 | Sobic.002G384100 | expressed protein | - |
| 11 | Sobic.009G236300 | lectin-like receptor kinase, putative, expressed | - |
| 12 | Sobic.003G235400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPCME, putative, expressed | K15889: prenylcysteine alpha-carboxyl methylesterase |
| 13 | Sobic.004G142500 | Up-reguralion under drought(PubMedID : 24916767)@late embryogenesis abundant protein D-34, putative, expressed | - |
| 14 | Sobic.005G215766 | - | - |
| 15 | Sobic.002G261600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed | K01188: beta-glucosidase |
| 16 | Sobic.001G354800 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein | - |
| 17 | Sobic.010G146500 | RGH1A, putative, expressed | - |
| 18 | Sobic.001G044300 | transcription factor, putative, expressed | K09060: plant G-box-binding factor |
| 19 | Sobic.009G161900 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@NDP1, putative, expressed | - |
| 20 | Sobic.003G427300 | uridine 5-monophosphate synthase, putative, expressed | K13421: uridine monophosphate synthetase |
Gene co-expression network
Octagon: transcription factors
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