Gene annotation
Transcriptome id Sobic.003G292932.1
Synonym -
Functional annotation -
UniProt A0A1W0VZI2
Pfam -
Panther DB PTHR11909 PTHR11909:SF181
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G25760 : Protein kinase family protein
RAP-DB (Rice) LOC_Os01g54100.1 : CK1_CaseinKinase_1a.2 - CK1 includes the casein kinase 1 kinases, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G042900 pentatricopeptide, putative, expressed -
2 Sobic.003G420000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat domain containing protein, putative, expressed -
3 Sobic.010G087000 - -
4 Sobic.004G217900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide domain containing protein, putative, expressed -
5 Sobic.002G059800 - -
6 Sobic.002G142600 NLI interacting factor-like phosphatase, putative, expressed -
7 Sobic.008G152300 expressed protein K15208: snRNA-activating protein complex subunit 1
8 Sobic.010G153000 expressed protein -
9 Sobic.004G149800 transcriptional derepression of gliadins and low-molecular-weight glutenins (LMWgs) by active demethylation of their promoters(PubMedID : 23184965)@hhH-GPD superfamily base excision DNA repair protein, expressed -
10 Sobic.001G152360 - -
11 Sobic.008G007300 HIT zinc finger domain containing protein, expressed K11663: ZNHIT1, zinc finger HIT domain-containing protein 1
12 Sobic.003G419800 pentatricopeptide repeat protein PPR1106-17, putative, expressed -
13 Sobic.001G187800 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
14 Sobic.001G009400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
15 Sobic.006G212500 - -
16 Sobic.007G077700 expressed protein -
17 Sobic.010G091500 pentatricopeptide, putative, expressed -
18 Sobic.006G085800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
19 Sobic.004G276133 - -
20 Sobic.003G236100 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic003G292932 Sobic003G292932 Sobic002G042900 Sobic002G042900 Sobic003G292932--Sobic002G042900 Sobic003G420000 Sobic003G420000 Sobic003G292932--Sobic003G420000 Sobic010G087000 Sobic010G087000 Sobic003G292932--Sobic010G087000 Sobic004G217900 Sobic004G217900 Sobic003G292932--Sobic004G217900 Sobic002G059800 Sobic002G059800 Sobic003G292932--Sobic002G059800 Sobic002G142600 Sobic002G142600 Sobic003G292932--Sobic002G142600 Sobic008G152300 Sobic008G152300 Sobic003G292932--Sobic008G152300 Sobic010G153000 Sobic010G153000 Sobic003G292932--Sobic010G153000 Sobic004G149800 Sobic004G149800 Sobic003G292932--Sobic004G149800 Sobic002G042900--Sobic004G217900 Sobic005G123900 Sobic005G123900 Sobic002G042900--Sobic005G123900 Sobic001G001200 Sobic001G001200 Sobic002G042900--Sobic001G001200 Sobic009G136200 Sobic009G136200 Sobic002G042900--Sobic009G136200 Sobic002G042900--Sobic003G292932 Sobic006G099501 Sobic006G099501 Sobic002G042900--Sobic006G099501 Sobic007G179600 Sobic007G179600 Sobic002G042900--Sobic007G179600 Sobic003G051500 Sobic003G051500 Sobic002G042900--Sobic003G051500 Sobic003G419800 Sobic003G419800 Sobic002G042900--Sobic003G419800 Sobic003G067201 Sobic003G067201 Sobic003G420000--Sobic003G067201 Sobic001G261585 Sobic001G261585 Sobic003G420000--Sobic001G261585 Sobic004G030600 Sobic004G030600 Sobic003G420000--Sobic004G030600 Sobic001G187800 Sobic001G187800 Sobic003G420000--Sobic001G187800 Sobic003G420000--Sobic004G149800 Sobic003G420000--Sobic004G217900 Sobic005G168300 Sobic005G168300 Sobic003G420000--Sobic005G168300 Sobic008G082800 Sobic008G082800 Sobic003G420000--Sobic008G082800 Sobic001G088900 Sobic001G088900 Sobic003G420000--Sobic001G088900 Sobic006G212500 Sobic006G212500 Sobic010G087000--Sobic006G212500 Sobic002G053200 Sobic002G053200 Sobic010G087000--Sobic002G053200 Sobic010G087000--Sobic004G217900 Sobic010G087000--Sobic003G292932 Sobic010G087000--Sobic002G042900 Sobic003G237100 Sobic003G237100 Sobic010G087000--Sobic003G237100 Sobic001G299800 Sobic001G299800 Sobic010G087000--Sobic001G299800 Sobic010G087000--Sobic002G059800 Sobic001G152360 Sobic001G152360 Sobic010G087000--Sobic001G152360 Sobic009G155400 Sobic009G155400 Sobic004G217900--Sobic009G155400 Sobic008G163400 Sobic008G163400 Sobic004G217900--Sobic008G163400 Sobic009G116400 Sobic009G116400 Sobic004G217900--Sobic009G116400 Sobic004G217900--Sobic001G187800 Sobic008G099900 Sobic008G099900 Sobic004G217900--Sobic008G099900 Sobic004G217900--Sobic003G051500 Sobic004G241000 Sobic004G241000 Sobic004G217900--Sobic004G241000 Sobic010G190900 Sobic010G190900 Sobic004G217900--Sobic010G190900 Sobic001G149100 Sobic001G149100 Sobic004G217900--Sobic001G149100 Sobic008G106400 Sobic008G106400 Sobic002G059800--Sobic008G106400 Sobic002G431200 Sobic002G431200 Sobic002G059800--Sobic002G431200 Sobic002G344301 Sobic002G344301 Sobic002G059800--Sobic002G344301 Sobic005G043400 Sobic005G043400 Sobic002G059800--Sobic005G043400 Sobic002G059800--Sobic006G099501 Sobic007G199300 Sobic007G199300 Sobic002G059800--Sobic007G199300 Sobic009G121750 Sobic009G121750 Sobic002G059800--Sobic009G121750 Sobic005G127300 Sobic005G127300 Sobic002G059800--Sobic005G127300 Sobic008G007300 Sobic008G007300 Sobic002G059800--Sobic008G007300 Sobic006G226300 Sobic006G226300 Sobic002G142600--Sobic006G226300 Sobic009G235200 Sobic009G235200 Sobic002G142600--Sobic009G235200 Sobic005G199200 Sobic005G199200 Sobic002G142600--Sobic005G199200 Sobic001G334100 Sobic001G334100 Sobic002G142600--Sobic001G334100 Sobic003G184400 Sobic003G184400 Sobic002G142600--Sobic003G184400 Sobic009G074700 Sobic009G074700 Sobic002G142600--Sobic009G074700 Sobic006G131200 Sobic006G131200 Sobic002G142600--Sobic006G131200 Sobic006G185200 Sobic006G185200 Sobic002G142600--Sobic006G185200 Sobic010G007100 Sobic010G007100 Sobic002G142600--Sobic010G007100 Sobic010G091500 Sobic010G091500 Sobic008G152300--Sobic010G091500 Sobic002G344500 Sobic002G344500 Sobic008G152300--Sobic002G344500 Sobic002G380100 Sobic002G380100 Sobic008G152300--Sobic002G380100 Sobic008G152300--Sobic001G334100 Sobic008G152300--Sobic004G149800 Sobic008G152300--Sobic003G067201 Sobic008G152300--Sobic002G142600 Sobic006G028700 Sobic006G028700 Sobic008G152300--Sobic006G028700 Sobic006G069100 Sobic006G069100 Sobic008G152300--Sobic006G069100 Sobic006G262700 Sobic006G262700 Sobic010G153000--Sobic006G262700 Sobic007G118075 Sobic007G118075 Sobic010G153000--Sobic007G118075 Sobic002G011100 Sobic002G011100 Sobic010G153000--Sobic002G011100 Sobic010G153000--Sobic009G116400 Sobic005G154700 Sobic005G154700 Sobic010G153000--Sobic005G154700 Sobic004G089500 Sobic004G089500 Sobic010G153000--Sobic004G089500 Sobic001G204700 Sobic001G204700 Sobic010G153000--Sobic001G204700 Sobic003G397100 Sobic003G397100 Sobic010G153000--Sobic003G397100 Sobic010G153000--Sobic006G028700 Sobic004G149800--Sobic009G074700 Sobic004G149800--Sobic006G028700 Sobic004G149800--Sobic001G088900 Sobic009G213100 Sobic009G213100 Sobic004G149800--Sobic009G213100 Sobic009G000400 Sobic009G000400 Sobic004G149800--Sobic009G000400 Sobic004G149800--Sobic005G199200 Sobic004G149800--Sobic006G131200 Sobic004G128200 Sobic004G128200 Sobic004G149800--Sobic004G128200 Sobic010G278600 Sobic010G278600 Sobic004G149800--Sobic010G278600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.