Gene annotation
Transcriptome id Sobic.003G293800.1
Synonym Sb03g034420
Functional annotation OsMan02 - Endo-Beta-Mannanase, expressed
UniProt C5XK18
Pfam PF00150
Panther DB PTHR31451
NCBI CDD -
KEGG Orthology K19355; mannan endo-1,4-beta-mannosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT2G20680 : Glycosyl hydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g54300.1 : OsMan02 - Endo-Beta-Mannanase, expressed
MaizeGDB (Corn) Zm00025a027555
Brachypodium KQK09709
Barley HORVU3Hr1G071210.1 , HORVU3Hr1G071210.2 , HORVU3Hr1G071210.3 , HORVU3Hr1G060060.1 , HORVU3Hr1G060060.3 , HORVU3Hr1G060060.2 , HORVU3Hr1G060060.5 , HORVU3Hr1G060060.4 , HORVU3Hr1G060060.6 , HORVU3Hr1G060060.8 , HORVU3Hr1G060060.7
Wheat TraesCS3A02G241000 , TraesCS3B02G307900 , TraesCS3A02G274200 , TraesCS3D02G273400 , TraesCS3B02G269200 , TraesCS3D02G241300 , TraesCS3D02G241300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G258200 expressed protein -
2 Sobic.007G007800 DNA repair metallo-beta-lactamase, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
3 Sobic.001G227700 expressed protein -
4 Sobic.009G076200 NLI interacting factor(NIF) family protein(PubMedID : 26320239)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
5 Sobic.004G075900 CSLA1 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
6 Sobic.005G020100 CDC45B - Putative DNA replication initiation protein, expressed K06628: cell division control protein 45
7 Sobic.001G013400 nuf2 family protein, expressed -
8 Sobic.002G237000 fasciclin domain containing protein, expressed -
9 Sobic.009G058100 FHA domain containing protein, putative, expressed -
10 Sobic.003G006000 expressed protein -
11 Sobic.001G118800 homologous-pairing protein meu13, putative, expressed K06695: 26S proteasome regulatory subunit, ATPase 3, interacting protein
12 Sobic.003G055600 expressed protein -
13 Sobic.003G088600 transcription factor X1, putative, expressed -
14 Sobic.008G137700 XH domain containing protein, expressed -
15 Sobic.004G331600 MCM5 - Putative minichromosome maintenance MCM complex subunit 5, expressed K02209: MCM5, DNA replication licensing factor MCM5
16 Sobic.002G309000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
17 Sobic.006G015100 expressed protein -
18 Sobic.006G112300 RNA recognition motif family protein, expressed -
19 Sobic.003G289700 ulp1 protease family protein, putative, expressed K16287: ubiquitin-like-specific protease 1C/D
20 Sobic.007G121650 - -


Gene co-expression network
sample Sobic003G293800 Sobic003G293800 Sobic004G258200 Sobic004G258200 Sobic003G293800--Sobic004G258200 Sobic007G007800 Sobic007G007800 Sobic003G293800--Sobic007G007800 Sobic001G227700 Sobic001G227700 Sobic003G293800--Sobic001G227700 Sobic009G076200 Sobic009G076200 Sobic003G293800--Sobic009G076200 Sobic004G075900 Sobic004G075900 Sobic003G293800--Sobic004G075900 Sobic005G020100 Sobic005G020100 Sobic003G293800--Sobic005G020100 Sobic001G013400 Sobic001G013400 Sobic003G293800--Sobic001G013400 Sobic002G237000 Sobic002G237000 Sobic003G293800--Sobic002G237000 Sobic009G058100 Sobic009G058100 Sobic003G293800--Sobic009G058100 Sobic004G258200--Sobic009G076200 Sobic004G331600 Sobic004G331600 Sobic004G258200--Sobic004G331600 Sobic004G258200--Sobic003G293800 Sobic005G110535 Sobic005G110535 Sobic004G258200--Sobic005G110535 Sobic004G258200--Sobic007G007800 Sobic004G053900 Sobic004G053900 Sobic004G258200--Sobic004G053900 Sobic008G129200 Sobic008G129200 Sobic004G258200--Sobic008G129200 Sobic003G055600 Sobic003G055600 Sobic004G258200--Sobic003G055600 Sobic002G190000 Sobic002G190000 Sobic004G258200--Sobic002G190000 Sobic002G272300 Sobic002G272300 Sobic007G007800--Sobic002G272300 Sobic001G105800 Sobic001G105800 Sobic007G007800--Sobic001G105800 Sobic009G184200 Sobic009G184200 Sobic007G007800--Sobic009G184200 Sobic007G007800--Sobic001G013400 Sobic002G223900 Sobic002G223900 Sobic007G007800--Sobic002G223900 Sobic007G007800--Sobic004G331600 Sobic007G007800--Sobic005G020100 Sobic010G092400 Sobic010G092400 Sobic007G007800--Sobic010G092400 Sobic001G083300 Sobic001G083300 Sobic007G007800--Sobic001G083300 Sobic001G175100 Sobic001G175100 Sobic001G227700--Sobic001G175100 Sobic004G003700 Sobic004G003700 Sobic001G227700--Sobic004G003700 Sobic001G227700--Sobic009G058100 Sobic001G443600 Sobic001G443600 Sobic001G227700--Sobic001G443600 Sobic006G232900 Sobic006G232900 Sobic001G227700--Sobic006G232900 Sobic005G168400 Sobic005G168400 Sobic001G227700--Sobic005G168400 Sobic007G147200 Sobic007G147200 Sobic001G227700--Sobic007G147200 Sobic004G237000 Sobic004G237000 Sobic001G227700--Sobic004G237000 Sobic001G143400 Sobic001G143400 Sobic001G227700--Sobic001G143400 Sobic009G076200--Sobic004G331600 Sobic006G116500 Sobic006G116500 Sobic009G076200--Sobic006G116500 Sobic009G076200--Sobic008G129200 Sobic005G144600 Sobic005G144600 Sobic009G076200--Sobic005G144600 Sobic010G147700 Sobic010G147700 Sobic009G076200--Sobic010G147700 Sobic009G076200--Sobic005G110535 Sobic009G076200--Sobic002G223900 Sobic003G179500 Sobic003G179500 Sobic009G076200--Sobic003G179500 Sobic003G183700 Sobic003G183700 Sobic009G076200--Sobic003G183700 Sobic001G142000 Sobic001G142000 Sobic004G075900--Sobic001G142000 Sobic004G075900--Sobic001G105800 Sobic004G075900--Sobic007G007800 Sobic004G075900--Sobic001G013400 Sobic004G075900--Sobic004G331600 Sobic007G100600 Sobic007G100600 Sobic004G075900--Sobic007G100600 Sobic003G444300 Sobic003G444300 Sobic004G075900--Sobic003G444300 Sobic001G456500 Sobic001G456500 Sobic004G075900--Sobic001G456500 Sobic003G387700 Sobic003G387700 Sobic004G075900--Sobic003G387700 Sobic005G020100--Sobic007G007800 Sobic001G271600 Sobic001G271600 Sobic005G020100--Sobic001G271600 Sobic007G000500 Sobic007G000500 Sobic005G020100--Sobic007G000500 Sobic003G085900 Sobic003G085900 Sobic005G020100--Sobic003G085900 Sobic010G204700 Sobic010G204700 Sobic005G020100--Sobic010G204700 Sobic003G374100 Sobic003G374100 Sobic005G020100--Sobic003G374100 Sobic010G269700 Sobic010G269700 Sobic005G020100--Sobic010G269700 Sobic005G020100--Sobic002G272300 Sobic006G228000 Sobic006G228000 Sobic005G020100--Sobic006G228000 Sobic001G025900 Sobic001G025900 Sobic001G013400--Sobic001G025900 Sobic001G013400--Sobic007G007800 Sobic002G290000 Sobic002G290000 Sobic001G013400--Sobic002G290000 Sobic002G113400 Sobic002G113400 Sobic001G013400--Sobic002G113400 Sobic001G013400--Sobic008G129200 Sobic001G013400--Sobic001G142000 Sobic001G013400--Sobic005G110535 Sobic001G013400--Sobic001G083300 Sobic001G013400--Sobic004G331600 Sobic002G237000--Sobic006G228000 Sobic001G137800 Sobic001G137800 Sobic002G237000--Sobic001G137800 Sobic001G216400 Sobic001G216400 Sobic002G237000--Sobic001G216400 Sobic009G075500 Sobic009G075500 Sobic002G237000--Sobic009G075500 Sobic007G043000 Sobic007G043000 Sobic002G237000--Sobic007G043000 Sobic001G235200 Sobic001G235200 Sobic002G237000--Sobic001G235200 Sobic003G204200 Sobic003G204200 Sobic002G237000--Sobic003G204200 Sobic004G234600 Sobic004G234600 Sobic002G237000--Sobic004G234600 Sobic003G092300 Sobic003G092300 Sobic002G237000--Sobic003G092300 Sobic004G063600 Sobic004G063600 Sobic009G058100--Sobic004G063600 Sobic009G136000 Sobic009G136000 Sobic009G058100--Sobic009G136000 Sobic001G082800 Sobic001G082800 Sobic009G058100--Sobic001G082800 Sobic009G125800 Sobic009G125800 Sobic009G058100--Sobic009G125800 Sobic008G148000 Sobic008G148000 Sobic009G058100--Sobic008G148000 Sobic009G131200 Sobic009G131200 Sobic009G058100--Sobic009G131200 Sobic002G204400 Sobic002G204400 Sobic009G058100--Sobic002G204400 Sobic001G170800 Sobic001G170800 Sobic009G058100--Sobic001G170800 Sobic004G198100 Sobic004G198100 Sobic009G058100--Sobic004G198100
Octagon: transcription factors


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