Gene annotation
Transcriptome id Sobic.004G258200.4,Sobic.004G258200.3,Sobic.004G258200.1,Sobic.004G258200.2
Synonym Sb04g029660, XRI, XRI1
Functional annotation expressed protein
UniProt A0A1Z5RPA7 , C5XZU1 , A0A194YRQ4 , A0A1Z5RQ33
Pfam -
Panther DB PTHR33385 PTHR33385:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48720 : x-ray induced transcript 1
RAP-DB (Rice) LOC_Os09g23720.1 : expressed protein
MaizeGDB (Corn) Zm00025a055841 , Zm00025a011840
Brachypodium PNT60868 , PNT60869 , KQJ82196 , KQJ82197 , KQJ82194 , KQJ82195
Barley -
Wheat TraesCS4B02G276000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G076200 NLI interacting factor(NIF) family protein(PubMedID : 26320239)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
2 Sobic.004G331600 MCM5 - Putative minichromosome maintenance MCM complex subunit 5, expressed K02209: MCM5, DNA replication licensing factor MCM5
3 Sobic.003G293800 OsMan02 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
4 Sobic.005G110535 - K02540: DNA replication licensing factor MCM2
5 Sobic.007G007800 DNA repair metallo-beta-lactamase, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
6 Sobic.004G053900 expressed protein -
7 Sobic.008G129200 MCM7 - Putative minichromosome maintenance MCM complex subunit 7, expressed K02210: MCM7, DNA replication licensing factor MCM7
8 Sobic.003G055600 expressed protein -
9 Sobic.002G190000 ZOS9-05 - C2H2 zinc finger protein, expressed -
10 Sobic.002G290000 helicase, putative, expressed K15362: BRIP1, BACH1, fanconi anemia group J protein
11 Sobic.001G013400 nuf2 family protein, expressed -
12 Sobic.001G377700 expressed protein K10895: fanconi anemia group I protein
13 Sobic.002G113400 dnaJ domain containing protein, expressed -
14 Sobic.009G087000 MCM6 - Putative minichromosome maintenance MCM complex subunit 6, expressed K02542: DNA replication licensing factor MCM6
15 Sobic.006G195500 DNA-binding protein, putative, expressed K10742: DNA replication ATP-dependent helicase Dna2
16 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
17 Sobic.003G361200 CDC6 - Putative DNA replication initiation protein, expressed K02213: cell division control protein 6
18 Sobic.007G125300 BRCA1 C Terminus domain containing protein, expressed -
19 Sobic.002G223900 OsFBX330 - F-box domain containing protein, expressed -
20 Sobic.010G054600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribonucleoside-diphosphate reductase large subunit, putative, expressed K10807: ribonucleoside-diphosphate reductase subunit M1


Gene co-expression network
sample Sobic004G258200 Sobic004G258200 Sobic009G076200 Sobic009G076200 Sobic004G258200--Sobic009G076200 Sobic004G331600 Sobic004G331600 Sobic004G258200--Sobic004G331600 Sobic003G293800 Sobic003G293800 Sobic004G258200--Sobic003G293800 Sobic005G110535 Sobic005G110535 Sobic004G258200--Sobic005G110535 Sobic007G007800 Sobic007G007800 Sobic004G258200--Sobic007G007800 Sobic004G053900 Sobic004G053900 Sobic004G258200--Sobic004G053900 Sobic008G129200 Sobic008G129200 Sobic004G258200--Sobic008G129200 Sobic003G055600 Sobic003G055600 Sobic004G258200--Sobic003G055600 Sobic002G190000 Sobic002G190000 Sobic004G258200--Sobic002G190000 Sobic009G076200--Sobic004G331600 Sobic006G116500 Sobic006G116500 Sobic009G076200--Sobic006G116500 Sobic009G076200--Sobic008G129200 Sobic005G144600 Sobic005G144600 Sobic009G076200--Sobic005G144600 Sobic010G147700 Sobic010G147700 Sobic009G076200--Sobic010G147700 Sobic009G076200--Sobic005G110535 Sobic002G223900 Sobic002G223900 Sobic009G076200--Sobic002G223900 Sobic003G179500 Sobic003G179500 Sobic009G076200--Sobic003G179500 Sobic003G183700 Sobic003G183700 Sobic009G076200--Sobic003G183700 Sobic001G456500 Sobic001G456500 Sobic004G331600--Sobic001G456500 Sobic004G331600--Sobic008G129200 Sobic010G054600 Sobic010G054600 Sobic004G331600--Sobic010G054600 Sobic009G087000 Sobic009G087000 Sobic004G331600--Sobic009G087000 Sobic001G142000 Sobic001G142000 Sobic004G331600--Sobic001G142000 Sobic004G331600--Sobic002G223900 Sobic004G331600--Sobic003G183700 Sobic004G331600--Sobic010G147700 Sobic004G331600--Sobic007G007800 Sobic003G293800--Sobic004G258200 Sobic003G293800--Sobic007G007800 Sobic001G227700 Sobic001G227700 Sobic003G293800--Sobic001G227700 Sobic003G293800--Sobic009G076200 Sobic004G075900 Sobic004G075900 Sobic003G293800--Sobic004G075900 Sobic005G020100 Sobic005G020100 Sobic003G293800--Sobic005G020100 Sobic001G013400 Sobic001G013400 Sobic003G293800--Sobic001G013400 Sobic002G237000 Sobic002G237000 Sobic003G293800--Sobic002G237000 Sobic009G058100 Sobic009G058100 Sobic003G293800--Sobic009G058100 Sobic002G290000 Sobic002G290000 Sobic005G110535--Sobic002G290000 Sobic005G110535--Sobic009G087000 Sobic005G110535--Sobic010G147700 Sobic005G110535--Sobic008G129200 Sobic005G110535--Sobic003G183700 Sobic003G369200 Sobic003G369200 Sobic005G110535--Sobic003G369200 Sobic004G321400 Sobic004G321400 Sobic005G110535--Sobic004G321400 Sobic005G110535--Sobic003G179500 Sobic001G377700 Sobic001G377700 Sobic005G110535--Sobic001G377700 Sobic002G272300 Sobic002G272300 Sobic007G007800--Sobic002G272300 Sobic001G105800 Sobic001G105800 Sobic007G007800--Sobic001G105800 Sobic009G184200 Sobic009G184200 Sobic007G007800--Sobic009G184200 Sobic007G007800--Sobic001G013400 Sobic007G007800--Sobic002G223900 Sobic007G007800--Sobic004G331600 Sobic007G007800--Sobic005G020100 Sobic010G092400 Sobic010G092400 Sobic007G007800--Sobic010G092400 Sobic001G083300 Sobic001G083300 Sobic007G007800--Sobic001G083300 Sobic002G113400 Sobic002G113400 Sobic004G053900--Sobic002G113400 Sobic002G297500 Sobic002G297500 Sobic004G053900--Sobic002G297500 Sobic004G053900--Sobic002G290000 Sobic007G125300 Sobic007G125300 Sobic004G053900--Sobic007G125300 Sobic008G148000 Sobic008G148000 Sobic004G053900--Sobic008G148000 Sobic004G053900--Sobic005G110535 Sobic010G051100 Sobic010G051100 Sobic004G053900--Sobic010G051100 Sobic006G179200 Sobic006G179200 Sobic004G053900--Sobic006G179200 Sobic004G328300 Sobic004G328300 Sobic004G053900--Sobic004G328300 Sobic008G129200--Sobic004G331600 Sobic008G129200--Sobic009G087000 Sobic008G129200--Sobic005G110535 Sobic008G129200--Sobic001G456500 Sobic008G129200--Sobic010G147700 Sobic008G129200--Sobic003G183700 Sobic008G129200--Sobic001G083300 Sobic008G129200--Sobic010G054600 Sobic008G129200--Sobic006G116500 Sobic003G055600--Sobic001G377700 Sobic005G157300 Sobic005G157300 Sobic003G055600--Sobic005G157300 Sobic009G143200 Sobic009G143200 Sobic003G055600--Sobic009G143200 Sobic003G055600--Sobic003G183700 Sobic003G055600--Sobic004G321400 Sobic009G172950 Sobic009G172950 Sobic003G055600--Sobic009G172950 Sobic002G021200 Sobic002G021200 Sobic003G055600--Sobic002G021200 Sobic003G055600--Sobic005G110535 Sobic003G055600--Sobic007G007800 Sobic002G190000--Sobic003G055600 Sobic002G190000--Sobic001G377700 Sobic001G238900 Sobic001G238900 Sobic002G190000--Sobic001G238900 Sobic002G190000--Sobic005G110535 Sobic002G190000--Sobic004G053900 Sobic002G190000--Sobic002G290000 Sobic001G118800 Sobic001G118800 Sobic002G190000--Sobic001G118800 Sobic002G246900 Sobic002G246900 Sobic002G190000--Sobic002G246900 Sobic002G190000--Sobic001G013400
Octagon: transcription factors


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