Gene annotation
Transcriptome id Sobic.003G406000.1
Synonym Sb03g044140
Functional annotation OsFBO2 - F-box and other domain containing protein, expressed
UniProt A0A1B6Q7W3
Pfam PF08238 PF01753
Panther DB PTHR12298 PTHR12298:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67340 : HCP-like superfamily protein with MYND-type zinc finger
RAP-DB (Rice) LOC_Os01g69270.1 : OsFBO2 - F-box and other domain containing protein, expressed
MaizeGDB (Corn) Zm00025a055875 , Zm00025a011795 , Zm00025a039286 , Zm00025a026248
Brachypodium KQK11262 , KQJ82256 , PNT68671
Barley HORVU2Hr1G069440.5 , HORVU2Hr1G069440.4 , HORVU2Hr1G069440.6 , HORVU2Hr1G069440.1 , HORVU2Hr1G069440.3 , HORVU2Hr1G069440.2 , HORVU2Hr1G056510.10 , HORVU1Hr1G007300.1 , HORVU1Hr1G007300.2 , HORVU4Hr1G080860.1 , HORVU2Hr1G081910.1 , HORVU2Hr1G081910.2 , HORVU3Hr1G094600.4 , HORVU3Hr1G094600.5 , HORVU3Hr1G094600.2 , HORVU3Hr1G094600.3 , HORVU3Hr1G094600.1
Wheat TraesCS3D02G425300 , TraesCS3A02G429900 , TraesCS2A02G282300 , TraesCS2A02G282300 , TraesCS3B02G468000 , TraesCS2B02G299700 , TraesCS3B02G467900
Populus -


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cDNA sequences
Sobic.003G406000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G349200 cation efflux family protein, putative, expressed -
2 Sobic.008G033200 stem-specific protein TSJT1, putative, expressed -
3 Sobic.002G401900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.003G277600 DNAse I-like superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
5 Sobic.003G425500 Calcium-binding protein(PubMedID : 24906815)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCML10 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
6 Sobic.003G372400 amidophosphoribosyltransferase, chloroplast precursor, putative, expressed K00764: purF, amidophosphoribosyltransferase
7 Sobic.003G334000 expressed protein -
8 Sobic.001G042901 - K10760: adenylate dimethylallyltransferase (cytokinin synthase)
9 Sobic.002G196600 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding protein, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
10 Sobic.001G302200 glycosyl transferase 8 domain containing protein, putative, expressed -
11 Sobic.003G426700 expressed protein -
12 Sobic.006G130000 STRUBBELIG-RECEPTOR FAMILY 8 precursor, putative, expressed K13436: pto-interacting protein 1
13 Sobic.006G093100 ferric-chelate reductase, putative, expressed -
14 Sobic.001G244700 RIO1 family protein, expressed K08851: TP53RK, PRPK, TP53 regulating kinase and related kinases
15 Sobic.003G000400 C4-dicarboxylate transporter/malic acid transport protein domain containing protein, expressed -
16 Sobic.006G011300 membrane related protein CP5, putative, expressed -
17 Sobic.002G049600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.002G186400 OsFBX323 - F-box domain containing protein, expressed -
19 Sobic.002G219300 ZOS9-13 - C2H2 zinc finger protein, expressed -
20 Sobic.007G160200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@mitochondrial carrier protein, putative, expressed K15104: SLC25A11, solute carrier family 25 (mitochondrial oxoglutarate transporter), member 11


Gene co-expression network
sample Sobic003G406000 Sobic003G406000 Sobic003G349200 Sobic003G349200 Sobic003G406000--Sobic003G349200 Sobic008G033200 Sobic008G033200 Sobic003G406000--Sobic008G033200 Sobic002G401900 Sobic002G401900 Sobic003G406000--Sobic002G401900 Sobic003G277600 Sobic003G277600 Sobic003G406000--Sobic003G277600 Sobic003G425500 Sobic003G425500 Sobic003G406000--Sobic003G425500 Sobic003G372400 Sobic003G372400 Sobic003G406000--Sobic003G372400 Sobic003G334000 Sobic003G334000 Sobic003G406000--Sobic003G334000 Sobic001G042901 Sobic001G042901 Sobic003G406000--Sobic001G042901 Sobic002G196600 Sobic002G196600 Sobic003G406000--Sobic002G196600 Sobic001G339500 Sobic001G339500 Sobic003G349200--Sobic001G339500 Sobic003G349200--Sobic008G033200 Sobic003G349200--Sobic002G401900 Sobic006G011300 Sobic006G011300 Sobic003G349200--Sobic006G011300 Sobic006G215600 Sobic006G215600 Sobic003G349200--Sobic006G215600 Sobic002G232200 Sobic002G232200 Sobic003G349200--Sobic002G232200 Sobic002G339600 Sobic002G339600 Sobic003G349200--Sobic002G339600 Sobic006G120500 Sobic006G120500 Sobic003G349200--Sobic006G120500 Sobic001G073900 Sobic001G073900 Sobic003G349200--Sobic001G073900 Sobic003G036200 Sobic003G036200 Sobic008G033200--Sobic003G036200 Sobic002G324500 Sobic002G324500 Sobic008G033200--Sobic002G324500 Sobic004G215800 Sobic004G215800 Sobic008G033200--Sobic004G215800 Sobic006G093100 Sobic006G093100 Sobic008G033200--Sobic006G093100 Sobic008G033200--Sobic006G120500 Sobic002G390100 Sobic002G390100 Sobic008G033200--Sobic002G390100 Sobic008G117000 Sobic008G117000 Sobic008G033200--Sobic008G117000 Sobic007G105500 Sobic007G105500 Sobic008G033200--Sobic007G105500 Sobic003G185900 Sobic003G185900 Sobic008G033200--Sobic003G185900 Sobic002G401900--Sobic003G349200 Sobic002G401900--Sobic008G033200 Sobic003G342100 Sobic003G342100 Sobic002G401900--Sobic003G342100 Sobic002G401900--Sobic001G073900 Sobic002G401900--Sobic003G372400 Sobic002G401900--Sobic003G036200 Sobic002G403600 Sobic002G403600 Sobic002G401900--Sobic002G403600 Sobic005G231500 Sobic005G231500 Sobic002G401900--Sobic005G231500 Sobic006G130000 Sobic006G130000 Sobic002G401900--Sobic006G130000 Sobic003G277600--Sobic003G372400 Sobic009G246300 Sobic009G246300 Sobic003G277600--Sobic009G246300 Sobic004G165500 Sobic004G165500 Sobic003G277600--Sobic004G165500 Sobic010G104800 Sobic010G104800 Sobic003G277600--Sobic010G104800 Sobic009G048900 Sobic009G048900 Sobic003G277600--Sobic009G048900 Sobic004G112100 Sobic004G112100 Sobic003G277600--Sobic004G112100 Sobic003G139500 Sobic003G139500 Sobic003G277600--Sobic003G139500 Sobic001G043000 Sobic001G043000 Sobic003G277600--Sobic001G043000 Sobic003G042900 Sobic003G042900 Sobic003G277600--Sobic003G042900 Sobic003G354900 Sobic003G354900 Sobic003G425500--Sobic003G354900 Sobic009G069300 Sobic009G069300 Sobic003G425500--Sobic009G069300 Sobic003G339700 Sobic003G339700 Sobic003G425500--Sobic003G339700 Sobic009G195800 Sobic009G195800 Sobic003G425500--Sobic009G195800 Sobic001G333600 Sobic001G333600 Sobic003G425500--Sobic001G333600 Sobic001G391300 Sobic001G391300 Sobic003G425500--Sobic001G391300 Sobic003G350800 Sobic003G350800 Sobic003G425500--Sobic003G350800 Sobic007G160200 Sobic007G160200 Sobic003G425500--Sobic007G160200 Sobic009G183101 Sobic009G183101 Sobic003G425500--Sobic009G183101 Sobic003G372400--Sobic004G215800 Sobic002G056500 Sobic002G056500 Sobic003G372400--Sobic002G056500 Sobic003G372400--Sobic005G231500 Sobic003G097600 Sobic003G097600 Sobic003G372400--Sobic003G097600 Sobic003G372400--Sobic007G105500 Sobic003G314000 Sobic003G314000 Sobic003G372400--Sobic003G314000 Sobic003G372400--Sobic006G093100 Sobic008G129900 Sobic008G129900 Sobic003G372400--Sobic008G129900 Sobic003G371250 Sobic003G371250 Sobic003G372400--Sobic003G371250 Sobic003G334000--Sobic003G339700 Sobic003G381700 Sobic003G381700 Sobic003G334000--Sobic003G381700 Sobic003G334000--Sobic003G277600 Sobic007G062200 Sobic007G062200 Sobic003G334000--Sobic007G062200 Sobic003G334000--Sobic003G372400 Sobic003G051000 Sobic003G051000 Sobic003G334000--Sobic003G051000 Sobic006G064200 Sobic006G064200 Sobic003G334000--Sobic006G064200 Sobic008G077500 Sobic008G077500 Sobic003G334000--Sobic008G077500 Sobic003G334000--Sobic006G130000 Sobic001G042901--Sobic003G349200 Sobic010G059000 Sobic010G059000 Sobic001G042901--Sobic010G059000 Sobic006G064100 Sobic006G064100 Sobic001G042901--Sobic006G064100 Sobic001G042901--Sobic003G406000 Sobic003G000400 Sobic003G000400 Sobic001G042901--Sobic003G000400 Sobic003G266500 Sobic003G266500 Sobic001G042901--Sobic003G266500 Sobic005G053800 Sobic005G053800 Sobic001G042901--Sobic005G053800 Sobic010G205100 Sobic010G205100 Sobic001G042901--Sobic010G205100 Sobic001G302800 Sobic001G302800 Sobic001G042901--Sobic001G302800 Sobic002G196600--Sobic002G390100 Sobic002G196600--Sobic006G093100 Sobic010G231300 Sobic010G231300 Sobic002G196600--Sobic010G231300 Sobic002G196600--Sobic003G042900 Sobic002G219300 Sobic002G219300 Sobic002G196600--Sobic002G219300 Sobic001G073300 Sobic001G073300 Sobic002G196600--Sobic001G073300 Sobic001G244700 Sobic001G244700 Sobic002G196600--Sobic001G244700 Sobic002G404800 Sobic002G404800 Sobic002G196600--Sobic002G404800 Sobic006G161500 Sobic006G161500 Sobic002G196600--Sobic006G161500
Octagon: transcription factors


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