Gene annotation
Transcriptome id Sobic.004G049500.3
Synonym Sb04g004230, SnRK3.2, CBL-interacting protein kinases, SbCIPK31, CIPK2
Functional annotation Interacting factor of CBLs (PubMedID : 19860013)
CAMK_KIN1/SNF1/Nim1_like.13 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt O82051 , C4P7T4
Pfam PF14531 PF03822
Panther DB PTHR24347 PTHR24347:SF237
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology K07198; PRKAA, 5'-AMP-activated protein kinase, catalytic alpha subunit
Gene Ontology GO:0007165; signal transduction


Orthologs (automatic annotation)
TAIR AT5G58380 : SOS3-interacting protein 1
RAP-DB (Rice) LOC_Os02g06570.1 : CAMK_KIN1/SNF1/Nim1_like.13 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a027037 , Zm00025a019033
Brachypodium PNT65938 , KQJ93443 , KQJ93444 , KQJ93445 , PNT65937 , PNT65936
Barley HORVU6Hr1G025940.2 , HORVU0Hr1G015380.2 , HORVU0Hr1G015380.1 , HORVU6Hr1G025940.3 , HORVU0Hr1G015380.7 , HORVU0Hr1G015380.6 , HORVU0Hr1G015380.5 , HORVU0Hr1G015380.4 , HORVU0Hr1G015380.3 , HORVU0Hr1G015380.8
Wheat -
Populus -


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cDNA sequences
Sobic.004G049500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G085300 phytosulfokine receptor precursor, putative, expressed -
2 Sobic.002G294800 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
3 Sobic.008G087866 - -
4 Sobic.009G074400 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
5 Sobic.001G268200 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.004G065000 expressed protein -
7 Sobic.002G311100 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.001G261501 - -
9 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
10 Sobic.003G422500 expressed protein -
11 Sobic.001G121200 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.007G163100 expressed protein K14972: PAXIP1, PAX-interacting protein 1
13 Sobic.003G313500 MATH domain containing protein, expressed -
14 Sobic.001G117200 AGC_AGC_other_GWLd.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
15 Sobic.010G147100 VHS and GAT domain containing protein, expressed -
16 Sobic.001G241100 DNA-binding protein-like, putative, expressed K10624: E3 ubiquitin-protein ligase RBBP6
17 Sobic.003G110000 TBC domain containing protein, expressed -
18 Sobic.007G004500 phosphatidylinositol-4-phosphate 5-Kinase, putative, expressed K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase
19 Sobic.001G430400 Ser/Thr protein phosphatase family protein, putative, expressed -
20 Sobic.001G050200 expressed protein -


Gene co-expression network
sample Sobic004G049500 Sobic004G049500 Sobic001G085300 Sobic001G085300 Sobic004G049500--Sobic001G085300 Sobic002G294800 Sobic002G294800 Sobic004G049500--Sobic002G294800 Sobic008G087866 Sobic008G087866 Sobic004G049500--Sobic008G087866 Sobic009G074400 Sobic009G074400 Sobic004G049500--Sobic009G074400 Sobic001G268200 Sobic001G268200 Sobic004G049500--Sobic001G268200 Sobic004G065000 Sobic004G065000 Sobic004G049500--Sobic004G065000 Sobic002G311100 Sobic002G311100 Sobic004G049500--Sobic002G311100 Sobic001G261501 Sobic001G261501 Sobic004G049500--Sobic001G261501 Sobic001G390800 Sobic001G390800 Sobic004G049500--Sobic001G390800 Sobic001G085300--Sobic001G390800 Sobic003G313500 Sobic003G313500 Sobic001G085300--Sobic003G313500 Sobic001G117200 Sobic001G117200 Sobic001G085300--Sobic001G117200 Sobic003G110000 Sobic003G110000 Sobic001G085300--Sobic003G110000 Sobic003G422500 Sobic003G422500 Sobic001G085300--Sobic003G422500 Sobic001G415300 Sobic001G415300 Sobic001G085300--Sobic001G415300 Sobic010G139600 Sobic010G139600 Sobic001G085300--Sobic010G139600 Sobic003G196300 Sobic003G196300 Sobic001G085300--Sobic003G196300 Sobic001G085300--Sobic001G268200 Sobic005G027400 Sobic005G027400 Sobic002G294800--Sobic005G027400 Sobic001G241100 Sobic001G241100 Sobic002G294800--Sobic001G241100 Sobic003G355900 Sobic003G355900 Sobic002G294800--Sobic003G355900 Sobic002G211800 Sobic002G211800 Sobic002G294800--Sobic002G211800 Sobic005G059800 Sobic005G059800 Sobic002G294800--Sobic005G059800 Sobic002G294800--Sobic001G261501 Sobic010G032900 Sobic010G032900 Sobic002G294800--Sobic010G032900 Sobic001G389100 Sobic001G389100 Sobic002G294800--Sobic001G389100 Sobic010G013200 Sobic010G013200 Sobic002G294800--Sobic010G013200 Sobic009G165700 Sobic009G165700 Sobic008G087866--Sobic009G165700 Sobic008G087866--Sobic003G422500 Sobic008G001200 Sobic008G001200 Sobic008G087866--Sobic008G001200 Sobic008G087866--Sobic001G117200 Sobic003G166750 Sobic003G166750 Sobic008G087866--Sobic003G166750 Sobic005G001000 Sobic005G001000 Sobic008G087866--Sobic005G001000 Sobic003G170900 Sobic003G170900 Sobic008G087866--Sobic003G170900 Sobic001G194200 Sobic001G194200 Sobic008G087866--Sobic001G194200 Sobic001G370900 Sobic001G370900 Sobic008G087866--Sobic001G370900 Sobic003G316500 Sobic003G316500 Sobic009G074400--Sobic003G316500 Sobic001G534700 Sobic001G534700 Sobic009G074400--Sobic001G534700 Sobic003G155100 Sobic003G155100 Sobic009G074400--Sobic003G155100 Sobic003G198800 Sobic003G198800 Sobic009G074400--Sobic003G198800 Sobic009G074400--Sobic002G311100 Sobic006G051800 Sobic006G051800 Sobic009G074400--Sobic006G051800 Sobic006G219600 Sobic006G219600 Sobic009G074400--Sobic006G219600 Sobic009G074400--Sobic008G001200 Sobic004G001500 Sobic004G001500 Sobic009G074400--Sobic004G001500 Sobic001G268200--Sobic001G390800 Sobic001G268200--Sobic010G013200 Sobic010G147100 Sobic010G147100 Sobic001G268200--Sobic010G147100 Sobic001G268200--Sobic003G313500 Sobic001G121200 Sobic001G121200 Sobic001G268200--Sobic001G121200 Sobic001G268200--Sobic010G139600 Sobic001G268200--Sobic001G085300 Sobic001G268200--Sobic001G194200 Sobic009G053900 Sobic009G053900 Sobic001G268200--Sobic009G053900 Sobic007G075400 Sobic007G075400 Sobic004G065000--Sobic007G075400 Sobic004G331100 Sobic004G331100 Sobic004G065000--Sobic004G331100 Sobic009G133500 Sobic009G133500 Sobic004G065000--Sobic009G133500 Sobic007G163100 Sobic007G163100 Sobic004G065000--Sobic007G163100 Sobic007G133700 Sobic007G133700 Sobic004G065000--Sobic007G133700 Sobic004G065000--Sobic010G139600 Sobic001G313700 Sobic001G313700 Sobic004G065000--Sobic001G313700 Sobic001G273700 Sobic001G273700 Sobic004G065000--Sobic001G273700 Sobic004G065000--Sobic001G085300 Sobic002G311100--Sobic010G147100 Sobic002G311100--Sobic009G074400 Sobic002G311100--Sobic010G013200 Sobic003G264100 Sobic003G264100 Sobic002G311100--Sobic003G264100 Sobic010G131900 Sobic010G131900 Sobic002G311100--Sobic010G131900 Sobic010G074300 Sobic010G074300 Sobic002G311100--Sobic010G074300 Sobic009G143700 Sobic009G143700 Sobic002G311100--Sobic009G143700 Sobic009G201300 Sobic009G201300 Sobic002G311100--Sobic009G201300 Sobic003G195000 Sobic003G195000 Sobic002G311100--Sobic003G195000 Sobic001G261501--Sobic009G053900 Sobic002G380200 Sobic002G380200 Sobic001G261501--Sobic002G380200 Sobic001G261501--Sobic009G165700 Sobic003G408600 Sobic003G408600 Sobic001G261501--Sobic003G408600 Sobic001G261501--Sobic005G027400 Sobic001G540400 Sobic001G540400 Sobic001G261501--Sobic001G540400 Sobic007G157000 Sobic007G157000 Sobic001G261501--Sobic007G157000 Sobic001G261501--Sobic003G422500 Sobic007G063000 Sobic007G063000 Sobic001G261501--Sobic007G063000 Sobic001G390800--Sobic001G268200 Sobic001G390800--Sobic001G121200 Sobic001G390800--Sobic003G313500 Sobic010G205800 Sobic010G205800 Sobic001G390800--Sobic010G205800 Sobic001G390800--Sobic001G085300 Sobic001G390800--Sobic010G147100 Sobic001G390800--Sobic007G075400 Sobic001G390800--Sobic010G139600 Sobic001G050200 Sobic001G050200 Sobic001G390800--Sobic001G050200
Octagon: transcription factors


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