Gene annotation
Transcriptome id Sobic.004G137500.1,Sobic.004G137500.6,Sobic.004G137500.2,Sobic.004G137500.3,Sobic.004G137500.5,Sobic.004G137500.4
Synonym Sb04g016070
Functional annotation expressed protein
UniProt A0A194YQP2 , A0A1Z5RMC4 , A0A1Z5RN41 , A0A1Z5RMC1 , A0A194YPI6 , A0A194YPJ0
Pfam -
Panther DB PTHR34360 PTHR34360:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28410 : -
RAP-DB (Rice) LOC_Os02g20270.1 : expressed protein
MaizeGDB (Corn) Zm00025a034311
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G348600 tetratricopeptide repeat containing protein, putative, expressed -
2 Sobic.010G081700 PPR repeat domain containing protein, putative, expressed -
3 Sobic.002G160700 WD domain, G-beta repeat domain containing protein, expressed K12880: THO complex subunit 3
4 Sobic.006G265600 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
5 Sobic.001G004200 uncharacterized protein yeiN, putative, expressed K16329: pseudouridylate synthase
6 Sobic.003G388900 PPR repeat domain containing protein, putative, expressed -
7 Sobic.010G188000 elongation factor, putative, expressed K12852: 116 kDa U5 small nuclear ribonucleoprotein component
8 Sobic.001G015400 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
9 Sobic.010G161525 - -
10 Sobic.002G364900 PPR repeat domain containing protein, putative, expressed -
11 Sobic.006G181800 gamma-tubulin complex component 6, putative, expressed K16573: TUBGCP6, gamma-tubulin complex component 6
12 Sobic.007G114000 histone deacetylase, putative, expressed K06067: histone deacetylase 1/2
13 Sobic.001G085800 WD domain, G-beta repeat domain containing protein, expressed K14406: cleavage stimulation factor subunit 1
14 Sobic.005G098000 serpin domain containing protein, putative, expressed K13963: serpin B
15 Sobic.001G522000 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
16 Sobic.002G071100 expressed protein K17408: DAP3, small subunit ribosomal protein S29
17 Sobic.001G304000 enoyl-CoA hydratase/isomerase family protein, putative, expressed K05605: 3-hydroxyisobutyryl-CoA hydrolase
18 Sobic.002G423500 T-complex protein, putative, expressed K09498: T-complex protein 1 subunit zeta
19 Sobic.004G174700 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
20 Sobic.006G029100 actin, putative, expressed K11673: ACTR8, ARP8, actin-related protein 8


Gene co-expression network
sample Sobic004G137500 Sobic004G137500 Sobic004G348600 Sobic004G348600 Sobic004G137500--Sobic004G348600 Sobic010G081700 Sobic010G081700 Sobic004G137500--Sobic010G081700 Sobic002G160700 Sobic002G160700 Sobic004G137500--Sobic002G160700 Sobic006G265600 Sobic006G265600 Sobic004G137500--Sobic006G265600 Sobic001G004200 Sobic001G004200 Sobic004G137500--Sobic001G004200 Sobic003G388900 Sobic003G388900 Sobic004G137500--Sobic003G388900 Sobic010G188000 Sobic010G188000 Sobic004G137500--Sobic010G188000 Sobic001G015400 Sobic001G015400 Sobic004G137500--Sobic001G015400 Sobic010G161525 Sobic010G161525 Sobic004G137500--Sobic010G161525 Sobic004G348600--Sobic004G137500 Sobic004G348600--Sobic010G081700 Sobic002G071100 Sobic002G071100 Sobic004G348600--Sobic002G071100 Sobic004G174700 Sobic004G174700 Sobic004G348600--Sobic004G174700 Sobic004G348600--Sobic006G265600 Sobic002G367800 Sobic002G367800 Sobic004G348600--Sobic002G367800 Sobic004G348600--Sobic001G004200 Sobic003G130000 Sobic003G130000 Sobic004G348600--Sobic003G130000 Sobic009G041800 Sobic009G041800 Sobic004G348600--Sobic009G041800 Sobic001G460500 Sobic001G460500 Sobic010G081700--Sobic001G460500 Sobic010G081700--Sobic004G348600 Sobic004G208500 Sobic004G208500 Sobic010G081700--Sobic004G208500 Sobic004G322300 Sobic004G322300 Sobic010G081700--Sobic004G322300 Sobic002G398700 Sobic002G398700 Sobic010G081700--Sobic002G398700 Sobic006G106300 Sobic006G106300 Sobic010G081700--Sobic006G106300 Sobic002G408900 Sobic002G408900 Sobic010G081700--Sobic002G408900 Sobic004G356200 Sobic004G356200 Sobic010G081700--Sobic004G356200 Sobic002G150700 Sobic002G150700 Sobic010G081700--Sobic002G150700 Sobic001G151600 Sobic001G151600 Sobic002G160700--Sobic001G151600 Sobic002G371600 Sobic002G371600 Sobic002G160700--Sobic002G371600 Sobic006G029100 Sobic006G029100 Sobic002G160700--Sobic006G029100 Sobic001G248100 Sobic001G248100 Sobic002G160700--Sobic001G248100 Sobic002G160700--Sobic006G265600 Sobic002G199400 Sobic002G199400 Sobic002G160700--Sobic002G199400 Sobic002G160700--Sobic002G408900 Sobic004G030400 Sobic004G030400 Sobic002G160700--Sobic004G030400 Sobic005G115500 Sobic005G115500 Sobic002G160700--Sobic005G115500 Sobic003G397900 Sobic003G397900 Sobic006G265600--Sobic003G397900 Sobic001G474400 Sobic001G474400 Sobic006G265600--Sobic001G474400 Sobic002G399900 Sobic002G399900 Sobic006G265600--Sobic002G399900 Sobic003G005900 Sobic003G005900 Sobic006G265600--Sobic003G005900 Sobic006G265600--Sobic001G151600 Sobic002G075900 Sobic002G075900 Sobic006G265600--Sobic002G075900 Sobic006G265600--Sobic002G160700 Sobic009G120500 Sobic009G120500 Sobic006G265600--Sobic009G120500 Sobic002G364900 Sobic002G364900 Sobic006G265600--Sobic002G364900 Sobic001G004200--Sobic002G408900 Sobic003G405500 Sobic003G405500 Sobic001G004200--Sobic003G405500 Sobic001G004200--Sobic004G208500 Sobic001G004200--Sobic001G474400 Sobic002G125800 Sobic002G125800 Sobic001G004200--Sobic002G125800 Sobic001G004200--Sobic001G015400 Sobic001G004200--Sobic002G199400 Sobic004G283600 Sobic004G283600 Sobic001G004200--Sobic004G283600 Sobic010G179700 Sobic010G179700 Sobic001G004200--Sobic010G179700 Sobic003G388900--Sobic002G367800 Sobic002G402500 Sobic002G402500 Sobic003G388900--Sobic002G402500 Sobic001G522000 Sobic001G522000 Sobic003G388900--Sobic001G522000 Sobic003G202100 Sobic003G202100 Sobic003G388900--Sobic003G202100 Sobic004G212100 Sobic004G212100 Sobic003G388900--Sobic004G212100 Sobic001G304000 Sobic001G304000 Sobic003G388900--Sobic001G304000 Sobic002G295900 Sobic002G295900 Sobic003G388900--Sobic002G295900 Sobic001G413100 Sobic001G413100 Sobic003G388900--Sobic001G413100 Sobic003G205400 Sobic003G205400 Sobic003G388900--Sobic003G205400 Sobic001G373000 Sobic001G373000 Sobic010G188000--Sobic001G373000 Sobic004G038100 Sobic004G038100 Sobic010G188000--Sobic004G038100 Sobic010G188000--Sobic002G371600 Sobic006G181800 Sobic006G181800 Sobic010G188000--Sobic006G181800 Sobic001G451300 Sobic001G451300 Sobic010G188000--Sobic001G451300 Sobic010G188000--Sobic002G160700 Sobic004G315500 Sobic004G315500 Sobic010G188000--Sobic004G315500 Sobic005G010900 Sobic005G010900 Sobic010G188000--Sobic005G010900 Sobic010G236600 Sobic010G236600 Sobic010G188000--Sobic010G236600 Sobic001G099900 Sobic001G099900 Sobic001G015400--Sobic001G099900 Sobic001G015400--Sobic004G208500 Sobic007G005500 Sobic007G005500 Sobic001G015400--Sobic007G005500 Sobic006G021700 Sobic006G021700 Sobic001G015400--Sobic006G021700 Sobic003G143800 Sobic003G143800 Sobic001G015400--Sobic003G143800 Sobic006G260500 Sobic006G260500 Sobic001G015400--Sobic006G260500 Sobic003G182300 Sobic003G182300 Sobic001G015400--Sobic003G182300 Sobic001G015400--Sobic002G398700 Sobic001G015400--Sobic006G106300 Sobic005G098000 Sobic005G098000 Sobic010G161525--Sobic005G098000 Sobic010G134100 Sobic010G134100 Sobic010G161525--Sobic010G134100 Sobic003G235700 Sobic003G235700 Sobic010G161525--Sobic003G235700 Sobic007G114000 Sobic007G114000 Sobic010G161525--Sobic007G114000 Sobic010G161525--Sobic004G212100 Sobic001G167500 Sobic001G167500 Sobic010G161525--Sobic001G167500 Sobic010G161525--Sobic002G367800 Sobic007G188600 Sobic007G188600 Sobic010G161525--Sobic007G188600 Sobic010G161525--Sobic002G071100
Octagon: transcription factors


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