Gene annotation
Transcriptome id Sobic.004G169100.1
Synonym Sb04g022050
Functional annotation receptor kinase, putative, expressed
UniProt C5XU21
Pfam PF08263 PF00069 PF13855
Panther DB PTHR27000 PTHR27000:SF199
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT3G47570 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os01g05870.1 : receptor kinase, putative, expressed
MaizeGDB (Corn) Zm00025a023417 , Zm00025a023418
Brachypodium KQK19388
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G169100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G262500 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
2 Sobic.004G179300 chloride channel protein, putative, expressed K05016: chloride channel 7
3 Sobic.008G059100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
4 Sobic.004G189200 OsFBK9 - F-box domain and kelch repeat containing protein, expressed -
5 Sobic.005G221250 - -
6 Sobic.006G175800 acyl-CoA thioesterase 2, putative, expressed K01068: acyl-coenzyme A thioesterase 1/2/4
7 Sobic.002G187700 expressed protein -
8 Sobic.008G187632 - -
9 Sobic.004G233200 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
10 Sobic.002G386100 expressed protein -
11 Sobic.001G488700 sucrose transporter 2(PubMedID : 26465154)@sucrose transporter 2(PubMedID : 26465154)@sucrose transporters("PubMedID : 27986867,PubMedID : 23805151")@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@sucrose transporter, putativ, expressed K15378: solute carrier family 45, member 1/2/4
12 Sobic.005G150350 - -
13 Sobic.001G298700 - -
14 Sobic.006G104600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.003G372500 DUF803 domain containing, putative, expressed -
16 Sobic.001G481900 SAC domain containing protein, putative, expressed -
17 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
18 Sobic.001G409300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphatidylinositol transfer protein alpha isoform, putative, expressed -
19 Sobic.007G190000 expressed protein -
20 Sobic.001G305500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic004G169100 Sobic004G169100 Sobic010G262500 Sobic010G262500 Sobic004G169100--Sobic010G262500 Sobic004G179300 Sobic004G179300 Sobic004G169100--Sobic004G179300 Sobic008G059100 Sobic008G059100 Sobic004G169100--Sobic008G059100 Sobic004G189200 Sobic004G189200 Sobic004G169100--Sobic004G189200 Sobic005G221250 Sobic005G221250 Sobic004G169100--Sobic005G221250 Sobic006G175800 Sobic006G175800 Sobic004G169100--Sobic006G175800 Sobic002G187700 Sobic002G187700 Sobic004G169100--Sobic002G187700 Sobic008G187632 Sobic008G187632 Sobic004G169100--Sobic008G187632 Sobic004G233200 Sobic004G233200 Sobic004G169100--Sobic004G233200 Sobic010G262500--Sobic006G175800 Sobic001G298700 Sobic001G298700 Sobic010G262500--Sobic001G298700 Sobic010G262500--Sobic005G221250 Sobic003G331300 Sobic003G331300 Sobic010G262500--Sobic003G331300 Sobic005G150350 Sobic005G150350 Sobic010G262500--Sobic005G150350 Sobic010G013200 Sobic010G013200 Sobic010G262500--Sobic010G013200 Sobic003G112800 Sobic003G112800 Sobic010G262500--Sobic003G112800 Sobic010G262500--Sobic008G059100 Sobic001G488700 Sobic001G488700 Sobic010G262500--Sobic001G488700 Sobic002G386100 Sobic002G386100 Sobic004G179300--Sobic002G386100 Sobic007G190000 Sobic007G190000 Sobic004G179300--Sobic007G190000 Sobic002G128200 Sobic002G128200 Sobic004G179300--Sobic002G128200 Sobic004G179300--Sobic004G189200 Sobic006G002300 Sobic006G002300 Sobic004G179300--Sobic006G002300 Sobic004G179300--Sobic002G187700 Sobic001G476700 Sobic001G476700 Sobic004G179300--Sobic001G476700 Sobic003G301900 Sobic003G301900 Sobic004G179300--Sobic003G301900 Sobic010G020800 Sobic010G020800 Sobic004G179300--Sobic010G020800 Sobic008G059100--Sobic001G488700 Sobic008G059100--Sobic002G187700 Sobic001G409300 Sobic001G409300 Sobic008G059100--Sobic001G409300 Sobic001G481900 Sobic001G481900 Sobic008G059100--Sobic001G481900 Sobic008G059100--Sobic004G233200 Sobic003G302800 Sobic003G302800 Sobic008G059100--Sobic003G302800 Sobic009G190700 Sobic009G190700 Sobic008G059100--Sobic009G190700 Sobic007G164000 Sobic007G164000 Sobic008G059100--Sobic007G164000 Sobic008G059100--Sobic010G262500 Sobic006G257800 Sobic006G257800 Sobic004G189200--Sobic006G257800 Sobic001G062300 Sobic001G062300 Sobic004G189200--Sobic001G062300 Sobic006G051800 Sobic006G051800 Sobic004G189200--Sobic006G051800 Sobic008G167600 Sobic008G167600 Sobic004G189200--Sobic008G167600 Sobic004G189200--Sobic007G190000 Sobic004G231900 Sobic004G231900 Sobic004G189200--Sobic004G231900 Sobic003G301500 Sobic003G301500 Sobic004G189200--Sobic003G301500 Sobic002G383600 Sobic002G383600 Sobic004G189200--Sobic002G383600 Sobic004G189200--Sobic004G179300 Sobic005G221250--Sobic008G187632 Sobic005G221250--Sobic005G150350 Sobic005G221250--Sobic010G262500 Sobic005G221250--Sobic001G298700 Sobic009G139000 Sobic009G139000 Sobic005G221250--Sobic009G139000 Sobic005G182000 Sobic005G182000 Sobic005G221250--Sobic005G182000 Sobic009G161550 Sobic009G161550 Sobic005G221250--Sobic009G161550 Sobic003G160100 Sobic003G160100 Sobic005G221250--Sobic003G160100 Sobic003G061200 Sobic003G061200 Sobic005G221250--Sobic003G061200 Sobic006G175800--Sobic010G262500 Sobic004G169000 Sobic004G169000 Sobic006G175800--Sobic004G169000 Sobic002G305000 Sobic002G305000 Sobic006G175800--Sobic002G305000 Sobic006G175800--Sobic002G187700 Sobic006G175800--Sobic001G488700 Sobic003G190400 Sobic003G190400 Sobic006G175800--Sobic003G190400 Sobic003G043300 Sobic003G043300 Sobic006G175800--Sobic003G043300 Sobic001G500800 Sobic001G500800 Sobic006G175800--Sobic001G500800 Sobic010G196500 Sobic010G196500 Sobic006G175800--Sobic010G196500 Sobic002G187700--Sobic001G481900 Sobic004G306500 Sobic004G306500 Sobic002G187700--Sobic004G306500 Sobic002G187700--Sobic008G059100 Sobic003G198800 Sobic003G198800 Sobic002G187700--Sobic003G198800 Sobic002G187700--Sobic001G488700 Sobic003G115900 Sobic003G115900 Sobic002G187700--Sobic003G115900 Sobic002G187700--Sobic006G002300 Sobic002G187700--Sobic003G190400 Sobic002G187700--Sobic004G169000 Sobic008G187632--Sobic005G221250 Sobic008G187632--Sobic005G150350 Sobic008G187632--Sobic003G160100 Sobic008G187632--Sobic002G187700 Sobic008G187632--Sobic010G020800 Sobic008G187632--Sobic010G262500 Sobic002G124600 Sobic002G124600 Sobic008G187632--Sobic002G124600 Sobic001G517800 Sobic001G517800 Sobic008G187632--Sobic001G517800 Sobic001G000501 Sobic001G000501 Sobic008G187632--Sobic001G000501 Sobic004G233200--Sobic001G488700 Sobic010G147100 Sobic010G147100 Sobic004G233200--Sobic010G147100 Sobic002G130800 Sobic002G130800 Sobic004G233200--Sobic002G130800 Sobic004G233200--Sobic008G059100 Sobic001G390800 Sobic001G390800 Sobic004G233200--Sobic001G390800 Sobic004G233200--Sobic002G187700 Sobic004G233200--Sobic002G305000 Sobic001G268200 Sobic001G268200 Sobic004G233200--Sobic001G268200 Sobic004G233200--Sobic004G306500
Octagon: transcription factors


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