Gene annotation
Transcriptome id Sobic.004G180500.1
Synonym ATOPR2, Sb04g022980, OPR2
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
12-oxophytodienoate reductase, putative, expressed
UniProt A0A194YQC6
Pfam PF00724
Panther DB PTHR22893 PTHR22893:SF45
NCBI CDD KOG0134; NADH:flavin oxidoreductase/12-oxophytodienoate reductase
KEGG Orthology K05894; 12-oxophytodienoic acid reductase
Gene Ontology GO:0016491; oxidoreductase activity GO:0010181FMN binding


Orthologs (automatic annotation)
TAIR AT1G76690 : 12-oxophytodienoate reductase 2
RAP-DB (Rice) LOC_Os02g35310.1 : 12-oxophytodienoate reductase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G244700 cytosolic phospholipase A2 beta, putative, expressed K19219: peptidyl-lysine (3S)-dioxygenase / protease
2 Sobic.002G105000 OsFBD15 - F-box and FBD domain containing protein, expressed -
3 Sobic.005G059400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized PPR-repeat protein, putative, expressed -
4 Sobic.004G289400 mitochondrial carrier protein, putative, expressed -
5 Sobic.002G429400 PPR repeat containing protein, expressed -
6 Sobic.007G174900 carrier, putative, expressed -
7 Sobic.006G180700 SNF2 family N-terminal domain containing protein, expressed K14439: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1
8 Sobic.008G013300 expressed protein -
9 Sobic.004G312100 HYS1, putative, expressed -
10 Sobic.003G361400 nsp1-like C-terminal region family protein, expressed K14306: NUP62, nuclear pore complex protein Nup62
11 Sobic.001G033900 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
12 Sobic.004G305400 coronatine-insensitive protein 1, putative, expressed -
13 Sobic.008G040700 mRNA-decapping enzyme, putative, expressed K12611: mRNA-decapping enzyme 1B
14 Sobic.003G060300 endoplasmic oxidoreductin-1 precursor, putative, expressed K10950: ERO1-like protein alpha
15 Sobic.001G413800 expressed protein K13141: integrator complex subunit 4
16 Sobic.003G259600 ORC4 - Putative origin recognition complex subunit 4, expressed K02606: origin recognition complex subunit 4
17 Sobic.007G187900 OsFBX187 - F-box domain containing protein, expressed -
18 Sobic.008G000600 RNase P subunit p30, putative, expressed K03539: RPP1, ribonuclease P/MRP protein subunit RPP1
19 Sobic.002G039200 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
20 Sobic.001G334100 1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed K01814: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase


Gene co-expression network
sample Sobic004G180500 Sobic004G180500 Sobic002G244700 Sobic002G244700 Sobic004G180500--Sobic002G244700 Sobic002G105000 Sobic002G105000 Sobic004G180500--Sobic002G105000 Sobic005G059400 Sobic005G059400 Sobic004G180500--Sobic005G059400 Sobic004G289400 Sobic004G289400 Sobic004G180500--Sobic004G289400 Sobic002G429400 Sobic002G429400 Sobic004G180500--Sobic002G429400 Sobic007G174900 Sobic007G174900 Sobic004G180500--Sobic007G174900 Sobic006G180700 Sobic006G180700 Sobic004G180500--Sobic006G180700 Sobic008G013300 Sobic008G013300 Sobic004G180500--Sobic008G013300 Sobic004G312100 Sobic004G312100 Sobic004G180500--Sobic004G312100 Sobic004G204400 Sobic004G204400 Sobic002G244700--Sobic004G204400 Sobic001G523100 Sobic001G523100 Sobic002G244700--Sobic001G523100 Sobic002G244700--Sobic004G180500 Sobic009G121750 Sobic009G121750 Sobic002G244700--Sobic009G121750 Sobic002G431200 Sobic002G431200 Sobic002G244700--Sobic002G431200 Sobic004G332000 Sobic004G332000 Sobic002G244700--Sobic004G332000 Sobic002G244700--Sobic002G105000 Sobic001G119700 Sobic001G119700 Sobic002G244700--Sobic001G119700 Sobic008G012700 Sobic008G012700 Sobic002G244700--Sobic008G012700 Sobic002G223300 Sobic002G223300 Sobic002G105000--Sobic002G223300 Sobic001G215400 Sobic001G215400 Sobic002G105000--Sobic001G215400 Sobic004G227500 Sobic004G227500 Sobic002G105000--Sobic004G227500 Sobic007G046900 Sobic007G046900 Sobic002G105000--Sobic007G046900 Sobic006G022500 Sobic006G022500 Sobic002G105000--Sobic006G022500 Sobic009G000400 Sobic009G000400 Sobic002G105000--Sobic009G000400 Sobic002G105000--Sobic006G180700 Sobic004G347100 Sobic004G347100 Sobic002G105000--Sobic004G347100 Sobic003G412100 Sobic003G412100 Sobic002G105000--Sobic003G412100 Sobic001G334100 Sobic001G334100 Sobic005G059400--Sobic001G334100 Sobic003G259600 Sobic003G259600 Sobic005G059400--Sobic003G259600 Sobic002G218700 Sobic002G218700 Sobic005G059400--Sobic002G218700 Sobic001G347100 Sobic001G347100 Sobic005G059400--Sobic001G347100 Sobic005G059400--Sobic006G180700 Sobic005G199200 Sobic005G199200 Sobic005G059400--Sobic005G199200 Sobic004G036700 Sobic004G036700 Sobic005G059400--Sobic004G036700 Sobic002G132600 Sobic002G132600 Sobic005G059400--Sobic002G132600 Sobic003G184400 Sobic003G184400 Sobic005G059400--Sobic003G184400 Sobic004G289400--Sobic002G429400 Sobic003G039500 Sobic003G039500 Sobic004G289400--Sobic003G039500 Sobic001G413800 Sobic001G413800 Sobic004G289400--Sobic001G413800 Sobic001G460500 Sobic001G460500 Sobic004G289400--Sobic001G460500 Sobic004G289400--Sobic003G259600 Sobic004G357400 Sobic004G357400 Sobic004G289400--Sobic004G357400 Sobic009G134900 Sobic009G134900 Sobic004G289400--Sobic009G134900 Sobic008G040700 Sobic008G040700 Sobic004G289400--Sobic008G040700 Sobic004G289400--Sobic004G180500 Sobic002G429400--Sobic004G289400 Sobic002G429400--Sobic006G180700 Sobic003G006400 Sobic003G006400 Sobic002G429400--Sobic003G006400 Sobic002G429400--Sobic001G413800 Sobic003G014700 Sobic003G014700 Sobic002G429400--Sobic003G014700 Sobic008G098600 Sobic008G098600 Sobic002G429400--Sobic008G098600 Sobic005G028300 Sobic005G028300 Sobic002G429400--Sobic005G028300 Sobic002G429400--Sobic001G334100 Sobic001G122200 Sobic001G122200 Sobic002G429400--Sobic001G122200 Sobic006G091000 Sobic006G091000 Sobic007G174900--Sobic006G091000 Sobic003G397100 Sobic003G397100 Sobic007G174900--Sobic003G397100 Sobic007G036800 Sobic007G036800 Sobic007G174900--Sobic007G036800 Sobic002G260700 Sobic002G260700 Sobic007G174900--Sobic002G260700 Sobic004G353400 Sobic004G353400 Sobic007G174900--Sobic004G353400 Sobic004G278900 Sobic004G278900 Sobic007G174900--Sobic004G278900 Sobic007G053400 Sobic007G053400 Sobic007G174900--Sobic007G053400 Sobic002G427800 Sobic002G427800 Sobic007G174900--Sobic002G427800 Sobic004G313300 Sobic004G313300 Sobic007G174900--Sobic004G313300 Sobic009G074700 Sobic009G074700 Sobic006G180700--Sobic009G074700 Sobic001G085700 Sobic001G085700 Sobic006G180700--Sobic001G085700 Sobic006G138000 Sobic006G138000 Sobic006G180700--Sobic006G138000 Sobic009G040800 Sobic009G040800 Sobic006G180700--Sobic009G040800 Sobic006G180700--Sobic009G000400 Sobic001G335900 Sobic001G335900 Sobic006G180700--Sobic001G335900 Sobic009G045200 Sobic009G045200 Sobic006G180700--Sobic009G045200 Sobic006G180700--Sobic006G091000 Sobic005G040900 Sobic005G040900 Sobic006G180700--Sobic005G040900 Sobic002G297600 Sobic002G297600 Sobic008G013300--Sobic002G297600 Sobic001G115500 Sobic001G115500 Sobic008G013300--Sobic001G115500 Sobic003G361400 Sobic003G361400 Sobic008G013300--Sobic003G361400 Sobic002G318600 Sobic002G318600 Sobic008G013300--Sobic002G318600 Sobic007G010900 Sobic007G010900 Sobic008G013300--Sobic007G010900 Sobic009G073400 Sobic009G073400 Sobic008G013300--Sobic009G073400 Sobic008G013300--Sobic003G259600 Sobic002G264300 Sobic002G264300 Sobic008G013300--Sobic002G264300 Sobic008G013300--Sobic008G040700 Sobic004G312100--Sobic006G180700 Sobic001G088900 Sobic001G088900 Sobic004G312100--Sobic001G088900 Sobic004G312100--Sobic001G334100 Sobic003G360300 Sobic003G360300 Sobic004G312100--Sobic003G360300 Sobic004G312100--Sobic006G091000 Sobic001G034500 Sobic001G034500 Sobic004G312100--Sobic001G034500 Sobic006G268300 Sobic006G268300 Sobic004G312100--Sobic006G268300 Sobic004G312100--Sobic003G259600 Sobic004G312100--Sobic001G413800
Octagon: transcription factors


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