Gene annotation
Transcriptome id Sobic.004G251500.1
Synonym CaS, Sb04g029100
Functional annotation - (PubMedID : 29017446)
arsenate reductase, putative, expressed
UniProt C5XZD9
Pfam PF00581
Panther DB PTHR34209 PTHR34209:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23060 : calcium sensing receptor
RAP-DB (Rice) LOC_Os02g49680.1 : arsenate reductase, putative, expressed
MaizeGDB (Corn) Zm00025a032628
Brachypodium KQK01494
Barley HORVU6Hr1G072740.2 , HORVU6Hr1G072740.3 , HORVU6Hr1G072740.1 , HORVU6Hr1G072740.4
Wheat TraesCS6D02G271900 , TraesCS6A02G290600 , TraesCS6B02G320900
Populus -


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cDNA sequences
Sobic.004G251500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G004600 Ferredoxin-1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
2 Sobic.009G091850 - -
3 Sobic.010G277600 - -
4 Sobic.008G172700 OsDegp15 - Putative Deg protease homologue, expressed -
5 Sobic.009G183700 XP_002441313.1 plastidic phosphoglycerate kinase(PubMedID : 26904072)@phosphoglycerate kinase(PubMedID : 29017446)@phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
6 Sobic.004G311100 -(PubMedID : 29017446)@-(PubMedID : 26976818)@soluble inorganic pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
7 Sobic.004G239100 -(PubMedID : 26465154)@expressed protein -
8 Sobic.009G143100 cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor, putative, expressed K02636: cytochrome b6-f complex iron-sulfur subunit
9 Sobic.001G527000 PsbP-like protein 1 (At)(PubMedID : 27208977)@Photosystem I subunit P-like protein(PubMedID : 29017446)@PsbP, putative, expressed K02717: photosystem II oxygen-evolving enhancer protein 2
10 Sobic.005G194100 expressed protein -
11 Sobic.009G091800 -(PubMedID : 29017446)@PTAC16, putative, expressed -
12 Sobic.006G013800 CBS domain containing membrane protein, putative, expressed -
13 Sobic.002G267900 expressed protein -
14 Sobic.002G198600 -(PubMedID : 29017446)@expressed protein -
15 Sobic.007G116950 - -
16 Sobic.003G433900 expressed protein -
17 Sobic.008G112300 -(PubMedID : 29017446)@-(PubMedID : 26976818)@citrate transporter, putative, expressed -
18 Sobic.008G051000 magnesium-chelatase subunit chlI, chloroplast precursor, putative, expressed K03405: chlI, magnesium chelatase subunit I
19 Sobic.001G489000 NAD(P)-linked oxidoreductase superfamily protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@putativ eribonuclease P, putative, expressed -
20 Sobic.001G023700 expressed protein -


Gene co-expression network
sample Sobic004G251500 Sobic004G251500 Sobic007G004600 Sobic007G004600 Sobic004G251500--Sobic007G004600 Sobic009G091850 Sobic009G091850 Sobic004G251500--Sobic009G091850 Sobic010G277600 Sobic010G277600 Sobic004G251500--Sobic010G277600 Sobic008G172700 Sobic008G172700 Sobic004G251500--Sobic008G172700 Sobic009G183700 Sobic009G183700 Sobic004G251500--Sobic009G183700 Sobic004G311100 Sobic004G311100 Sobic004G251500--Sobic004G311100 Sobic004G239100 Sobic004G239100 Sobic004G251500--Sobic004G239100 Sobic009G143100 Sobic009G143100 Sobic004G251500--Sobic009G143100 Sobic001G527000 Sobic001G527000 Sobic004G251500--Sobic001G527000 Sobic007G004600--Sobic009G183700 Sobic007G004600--Sobic010G277600 Sobic007G004600--Sobic001G527000 Sobic007G004600--Sobic009G091850 Sobic009G030900 Sobic009G030900 Sobic007G004600--Sobic009G030900 Sobic007G004600--Sobic004G311100 Sobic007G004600--Sobic004G251500 Sobic003G433900 Sobic003G433900 Sobic007G004600--Sobic003G433900 Sobic003G387800 Sobic003G387800 Sobic007G004600--Sobic003G387800 Sobic007G116950 Sobic007G116950 Sobic009G091850--Sobic007G116950 Sobic009G091850--Sobic001G527000 Sobic008G051000 Sobic008G051000 Sobic009G091850--Sobic008G051000 Sobic010G255600 Sobic010G255600 Sobic009G091850--Sobic010G255600 Sobic003G132100 Sobic003G132100 Sobic009G091850--Sobic003G132100 Sobic009G091850--Sobic003G433900 Sobic001G382100 Sobic001G382100 Sobic009G091850--Sobic001G382100 Sobic009G091850--Sobic007G004600 Sobic009G091800 Sobic009G091800 Sobic009G091850--Sobic009G091800 Sobic010G277600--Sobic009G183700 Sobic010G277600--Sobic009G030900 Sobic010G005500 Sobic010G005500 Sobic010G277600--Sobic010G005500 Sobic007G052400 Sobic007G052400 Sobic010G277600--Sobic007G052400 Sobic010G277600--Sobic004G239100 Sobic004G012900 Sobic004G012900 Sobic010G277600--Sobic004G012900 Sobic002G277100 Sobic002G277100 Sobic010G277600--Sobic002G277100 Sobic010G277600--Sobic007G004600 Sobic007G173800 Sobic007G173800 Sobic010G277600--Sobic007G173800 Sobic002G267900 Sobic002G267900 Sobic008G172700--Sobic002G267900 Sobic001G350000 Sobic001G350000 Sobic008G172700--Sobic001G350000 Sobic008G172700--Sobic004G239100 Sobic004G055000 Sobic004G055000 Sobic008G172700--Sobic004G055000 Sobic003G378600 Sobic003G378600 Sobic008G172700--Sobic003G378600 Sobic008G172700--Sobic010G277600 Sobic008G172700--Sobic009G183700 Sobic008G171300 Sobic008G171300 Sobic008G172700--Sobic008G171300 Sobic004G359600 Sobic004G359600 Sobic008G172700--Sobic004G359600 Sobic009G183700--Sobic010G277600 Sobic009G183700--Sobic002G277100 Sobic009G183700--Sobic010G005500 Sobic003G002300 Sobic003G002300 Sobic009G183700--Sobic003G002300 Sobic009G183700--Sobic007G052400 Sobic009G183700--Sobic007G004600 Sobic009G183700--Sobic009G030900 Sobic009G183700--Sobic003G387800 Sobic009G140600 Sobic009G140600 Sobic009G183700--Sobic009G140600 Sobic008G112300 Sobic008G112300 Sobic004G311100--Sobic008G112300 Sobic007G143700 Sobic007G143700 Sobic004G311100--Sobic007G143700 Sobic003G386300 Sobic003G386300 Sobic004G311100--Sobic003G386300 Sobic004G335800 Sobic004G335800 Sobic004G311100--Sobic004G335800 Sobic001G122400 Sobic001G122400 Sobic004G311100--Sobic001G122400 Sobic001G527100 Sobic001G527100 Sobic004G311100--Sobic001G527100 Sobic004G116100 Sobic004G116100 Sobic004G311100--Sobic004G116100 Sobic003G328200 Sobic003G328200 Sobic004G311100--Sobic003G328200 Sobic002G271700 Sobic002G271700 Sobic004G311100--Sobic002G271700 Sobic004G239100--Sobic010G277600 Sobic004G239100--Sobic009G183700 Sobic004G239100--Sobic008G172700 Sobic005G194100 Sobic005G194100 Sobic004G239100--Sobic005G194100 Sobic004G239100--Sobic003G378600 Sobic008G102000 Sobic008G102000 Sobic004G239100--Sobic008G102000 Sobic004G239100--Sobic009G030900 Sobic004G239100--Sobic009G140600 Sobic002G198600 Sobic002G198600 Sobic004G239100--Sobic002G198600 Sobic007G071500 Sobic007G071500 Sobic009G143100--Sobic007G071500 Sobic002G316700 Sobic002G316700 Sobic009G143100--Sobic002G316700 Sobic007G223500 Sobic007G223500 Sobic009G143100--Sobic007G223500 Sobic008G134800 Sobic008G134800 Sobic009G143100--Sobic008G134800 Sobic009G143100--Sobic003G387800 Sobic009G143100--Sobic009G140600 Sobic001G417200 Sobic001G417200 Sobic009G143100--Sobic001G417200 Sobic006G105900 Sobic006G105900 Sobic009G143100--Sobic006G105900 Sobic004G249800 Sobic004G249800 Sobic009G143100--Sobic004G249800 Sobic001G527000--Sobic009G091850 Sobic001G527000--Sobic007G004600 Sobic002G152700 Sobic002G152700 Sobic001G527000--Sobic002G152700 Sobic001G415400 Sobic001G415400 Sobic001G527000--Sobic001G415400 Sobic005G123200 Sobic005G123200 Sobic001G527000--Sobic005G123200 Sobic001G527000--Sobic010G277600 Sobic001G527000--Sobic009G183700 Sobic001G527000--Sobic009G030900 Sobic001G527000--Sobic007G143700
Octagon: transcription factors


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