Gene annotation
Transcriptome id Sobic.004G275900.1
Synonym Sb04g031290, PLL1
Functional annotation protein phosphatase 2C, putative, expressed
UniProt C5Y0S4
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF241
NCBI CDD KOG0700; Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT2G35350 : poltergeist like 1
RAP-DB (Rice) LOC_Os02g46490.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a021596 , Zm00025a020195 , Zm00025a020196
Brachypodium KQK00834
Barley HORVU6Hr1G066850.2
Wheat TraesCS6D02G251300 , TraesCS6B02G290600 , TraesCS6A02G263600
Populus -


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cDNA sequences
Sobic.004G275900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G326400 ankyrin repeat-rich protein, putative, expressed K19044: E3 ubiquitin-protein ligase XBAT32/33
2 Sobic.002G429800 PMR5, putative, expressed -
3 Sobic.002G090800 expressed protein -
4 Sobic.009G013700 pectinacetylesterase domain containing protein, expressed -
5 Sobic.001G168400 similar to Serine/threonine-protein kinase SAPK10(PubMedID : 29862293)@CAMK_CAMK_like.20 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
6 Sobic.010G199300 OsPOP14 - Putative Prolyl Oligopeptidase homologue, expressed -
7 Sobic.001G226000 WD domain, G-beta repeat domain containing protein, expressed K10599: PRPF19, pre-mRNA-processing factor 19
8 Sobic.009G257800 sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
9 Sobic.009G030300 RNA polymerase II-associated protein 3, putative, expressed -
10 Sobic.005G084100 Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(PubMedID : 31721651)@inactive receptor kinase At1g27190 precursor, putative, expressed -
11 Sobic.003G115100 importin subunit alpha, putative, expressed -
12 Sobic.005G114400 TBC domain containing protein, expressed -
13 Sobic.006G267300 expressed protein -
14 Sobic.006G129700 amine oxidase, flavin-containing, domain containing protein, expressed K00231: PPOX, protoporphyrinogen/coproporphyrinogen III oxidase
15 Sobic.004G241400 DCN1-like protein 2, putative, expressed K17822: DCN1-like protein 1/2
16 Sobic.001G371000 GTPase of unknown function domain containing protein, putative, expressed K14537: NUG2, nuclear GTP-binding protein
17 Sobic.004G027100 ADP-ribosylation factor, putative, expressed K07977: Arf/Sar family, other
18 Sobic.009G216000 mov34 family protein, putative, expressed K11864: BRCC3, BRCA1/BRCA2-containing complex subunit 3
19 Sobic.002G166500 protein phosphatase 2C, putative, expressed K17500: integrin-linked kinase-associated serine/threonine phosphatase 2C
20 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1


Gene co-expression network
sample Sobic004G275900 Sobic004G275900 Sobic004G326400 Sobic004G326400 Sobic004G275900--Sobic004G326400 Sobic002G429800 Sobic002G429800 Sobic004G275900--Sobic002G429800 Sobic002G090800 Sobic002G090800 Sobic004G275900--Sobic002G090800 Sobic009G013700 Sobic009G013700 Sobic004G275900--Sobic009G013700 Sobic001G168400 Sobic001G168400 Sobic004G275900--Sobic001G168400 Sobic010G199300 Sobic010G199300 Sobic004G275900--Sobic010G199300 Sobic001G226000 Sobic001G226000 Sobic004G275900--Sobic001G226000 Sobic009G257800 Sobic009G257800 Sobic004G275900--Sobic009G257800 Sobic009G030300 Sobic009G030300 Sobic004G275900--Sobic009G030300 Sobic003G401000 Sobic003G401000 Sobic004G326400--Sobic003G401000 Sobic004G326400--Sobic002G090800 Sobic008G136200 Sobic008G136200 Sobic004G326400--Sobic008G136200 Sobic001G407200 Sobic001G407200 Sobic004G326400--Sobic001G407200 Sobic008G041700 Sobic008G041700 Sobic004G326400--Sobic008G041700 Sobic004G345700 Sobic004G345700 Sobic004G326400--Sobic004G345700 Sobic001G094000 Sobic001G094000 Sobic004G326400--Sobic001G094000 Sobic004G057400 Sobic004G057400 Sobic004G326400--Sobic004G057400 Sobic004G326400--Sobic009G257800 Sobic002G429800--Sobic004G275900 Sobic006G098200 Sobic006G098200 Sobic002G429800--Sobic006G098200 Sobic007G020300 Sobic007G020300 Sobic002G429800--Sobic007G020300 Sobic003G131200 Sobic003G131200 Sobic002G429800--Sobic003G131200 Sobic005G159600 Sobic005G159600 Sobic002G429800--Sobic005G159600 Sobic006G130501 Sobic006G130501 Sobic002G429800--Sobic006G130501 Sobic010G242900 Sobic010G242900 Sobic002G429800--Sobic010G242900 Sobic006G033700 Sobic006G033700 Sobic002G429800--Sobic006G033700 Sobic002G429800--Sobic004G326400 Sobic002G090800--Sobic004G057400 Sobic002G090800--Sobic009G257800 Sobic003G081000 Sobic003G081000 Sobic002G090800--Sobic003G081000 Sobic004G205600 Sobic004G205600 Sobic002G090800--Sobic004G205600 Sobic002G090800--Sobic004G345700 Sobic009G198100 Sobic009G198100 Sobic002G090800--Sobic009G198100 Sobic004G240800 Sobic004G240800 Sobic002G090800--Sobic004G240800 Sobic010G033400 Sobic010G033400 Sobic002G090800--Sobic010G033400 Sobic007G205800 Sobic007G205800 Sobic002G090800--Sobic007G205800 Sobic009G013700--Sobic009G030300 Sobic008G008400 Sobic008G008400 Sobic009G013700--Sobic008G008400 Sobic009G013700--Sobic006G033700 Sobic009G013700--Sobic010G242900 Sobic001G215900 Sobic001G215900 Sobic009G013700--Sobic001G215900 Sobic009G013700--Sobic001G226000 Sobic003G347300 Sobic003G347300 Sobic009G013700--Sobic003G347300 Sobic002G168600 Sobic002G168600 Sobic009G013700--Sobic002G168600 Sobic002G218700 Sobic002G218700 Sobic009G013700--Sobic002G218700 Sobic010G264100 Sobic010G264100 Sobic001G168400--Sobic010G264100 Sobic001G168400--Sobic008G041700 Sobic007G011400 Sobic007G011400 Sobic001G168400--Sobic007G011400 Sobic009G040700 Sobic009G040700 Sobic001G168400--Sobic009G040700 Sobic002G300400 Sobic002G300400 Sobic001G168400--Sobic002G300400 Sobic003G187400 Sobic003G187400 Sobic001G168400--Sobic003G187400 Sobic001G168400--Sobic001G094000 Sobic001G486300 Sobic001G486300 Sobic001G168400--Sobic001G486300 Sobic005G149500 Sobic005G149500 Sobic001G168400--Sobic005G149500 Sobic001G439500 Sobic001G439500 Sobic010G199300--Sobic001G439500 Sobic005G162600 Sobic005G162600 Sobic010G199300--Sobic005G162600 Sobic006G028200 Sobic006G028200 Sobic010G199300--Sobic006G028200 Sobic001G451000 Sobic001G451000 Sobic010G199300--Sobic001G451000 Sobic004G061900 Sobic004G061900 Sobic010G199300--Sobic004G061900 Sobic003G315332 Sobic003G315332 Sobic010G199300--Sobic003G315332 Sobic007G185900 Sobic007G185900 Sobic010G199300--Sobic007G185900 Sobic002G177400 Sobic002G177400 Sobic010G199300--Sobic002G177400 Sobic010G199300--Sobic001G168400 Sobic001G226000--Sobic009G030300 Sobic006G278700 Sobic006G278700 Sobic001G226000--Sobic006G278700 Sobic006G267300 Sobic006G267300 Sobic001G226000--Sobic006G267300 Sobic003G115100 Sobic003G115100 Sobic001G226000--Sobic003G115100 Sobic002G077900 Sobic002G077900 Sobic001G226000--Sobic002G077900 Sobic009G195200 Sobic009G195200 Sobic001G226000--Sobic009G195200 Sobic003G433500 Sobic003G433500 Sobic001G226000--Sobic003G433500 Sobic001G010600 Sobic001G010600 Sobic001G226000--Sobic001G010600 Sobic004G013600 Sobic004G013600 Sobic001G226000--Sobic004G013600 Sobic009G257800--Sobic003G401000 Sobic009G257800--Sobic006G267300 Sobic009G257800--Sobic003G081000 Sobic004G283000 Sobic004G283000 Sobic009G257800--Sobic004G283000 Sobic009G257800--Sobic004G057400 Sobic009G257800--Sobic002G090800 Sobic006G252700 Sobic006G252700 Sobic009G257800--Sobic006G252700 Sobic004G325400 Sobic004G325400 Sobic009G257800--Sobic004G325400 Sobic001G090400 Sobic001G090400 Sobic009G257800--Sobic001G090400 Sobic009G030300--Sobic002G177400 Sobic009G030300--Sobic001G226000 Sobic009G030300--Sobic004G061900 Sobic009G044900 Sobic009G044900 Sobic009G030300--Sobic009G044900 Sobic009G030300--Sobic004G013600 Sobic004G088400 Sobic004G088400 Sobic009G030300--Sobic004G088400 Sobic008G117200 Sobic008G117200 Sobic009G030300--Sobic008G117200 Sobic002G334600 Sobic002G334600 Sobic009G030300--Sobic002G334600 Sobic008G129700 Sobic008G129700 Sobic009G030300--Sobic008G129700
Octagon: transcription factors


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