Gene annotation
Transcriptome id Sobic.006G012400.2,Sobic.006G012400.4,Sobic.006G012400.5,Sobic.006G012400.6,Sobic.006G012400.3
Synonym Sb06g001230
Functional annotation expressed protein
UniProt C5YBT9
Pfam PF07800
Panther DB PTHR31197 PTHR31197:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G24740 : Protein of unknown function (DUF1644)
RAP-DB (Rice) LOC_Os04g04010.1 : expressed protein
MaizeGDB (Corn) Zm00025a055593 , Zm00025a012254
Brachypodium KQJ81534 , KQJ81536 , KQJ81535
Barley HORVU2Hr1G023680.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G117400 expressed protein -
2 Sobic.004G209600 SWIM zinc finger family protein, putative, expressed -
3 Sobic.005G027400 RNA recognition motif containing protein, expressed K13161: heterogeneous nuclear ribonucleoprotein R
4 Sobic.004G274200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
5 Sobic.005G064000 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
6 Sobic.004G208900 RNA-binding protein Luc7-like, putative, expressed -
7 Sobic.001G363500 DIRP family protein, putative, expressed -
8 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
9 Sobic.008G113100 protein binding protein, putative, expressed -
10 Sobic.010G277500 expressed protein -
11 Sobic.010G139000 surp module family protein, putative, expressed K13123: G patch domain-containing protein 1
12 Sobic.001G241200 protein kinase domain containing protein, expressed -
13 Sobic.003G389200 Rad21 / Rec8 like protein, putative, expressed K06670: SCC1, MCD1, cohesin complex subunit SCC1
14 Sobic.010G140400 poor homologous synapsis 1 protein, putative, expressed -
15 Sobic.001G016600 FAR1 family protein, expressed -
16 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
17 Sobic.007G105100 STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
18 Sobic.009G040600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
19 Sobic.007G096000 expressed protein -
20 Sobic.001G207000 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2


Gene co-expression network
sample Sobic006G012400 Sobic006G012400 Sobic007G117400 Sobic007G117400 Sobic006G012400--Sobic007G117400 Sobic004G209600 Sobic004G209600 Sobic006G012400--Sobic004G209600 Sobic005G027400 Sobic005G027400 Sobic006G012400--Sobic005G027400 Sobic004G274200 Sobic004G274200 Sobic006G012400--Sobic004G274200 Sobic005G064000 Sobic005G064000 Sobic006G012400--Sobic005G064000 Sobic004G208900 Sobic004G208900 Sobic006G012400--Sobic004G208900 Sobic001G363500 Sobic001G363500 Sobic006G012400--Sobic001G363500 Sobic008G047800 Sobic008G047800 Sobic006G012400--Sobic008G047800 Sobic008G113100 Sobic008G113100 Sobic006G012400--Sobic008G113100 Sobic002G309600 Sobic002G309600 Sobic007G117400--Sobic002G309600 Sobic001G241200 Sobic001G241200 Sobic007G117400--Sobic001G241200 Sobic004G065100 Sobic004G065100 Sobic007G117400--Sobic004G065100 Sobic007G161000 Sobic007G161000 Sobic007G117400--Sobic007G161000 Sobic003G280800 Sobic003G280800 Sobic007G117400--Sobic003G280800 Sobic004G009600 Sobic004G009600 Sobic007G117400--Sobic004G009600 Sobic001G154900 Sobic001G154900 Sobic007G117400--Sobic001G154900 Sobic009G040600 Sobic009G040600 Sobic007G117400--Sobic009G040600 Sobic005G008800 Sobic005G008800 Sobic007G117400--Sobic005G008800 Sobic010G139000 Sobic010G139000 Sobic004G209600--Sobic010G139000 Sobic004G314000 Sobic004G314000 Sobic004G209600--Sobic004G314000 Sobic010G010700 Sobic010G010700 Sobic004G209600--Sobic010G010700 Sobic004G209600--Sobic007G117400 Sobic004G209600--Sobic005G008800 Sobic002G134200 Sobic002G134200 Sobic004G209600--Sobic002G134200 Sobic005G112300 Sobic005G112300 Sobic004G209600--Sobic005G112300 Sobic004G242400 Sobic004G242400 Sobic004G209600--Sobic004G242400 Sobic004G209600--Sobic003G280800 Sobic005G027400--Sobic002G309600 Sobic005G027400--Sobic004G065100 Sobic001G451400 Sobic001G451400 Sobic005G027400--Sobic001G451400 Sobic009G132700 Sobic009G132700 Sobic005G027400--Sobic009G132700 Sobic005G027400--Sobic007G117400 Sobic001G219600 Sobic001G219600 Sobic005G027400--Sobic001G219600 Sobic001G289800 Sobic001G289800 Sobic005G027400--Sobic001G289800 Sobic005G027400--Sobic008G047800 Sobic004G006900 Sobic004G006900 Sobic005G027400--Sobic004G006900 Sobic004G274200--Sobic008G047800 Sobic010G236400 Sobic010G236400 Sobic004G274200--Sobic010G236400 Sobic004G146500 Sobic004G146500 Sobic004G274200--Sobic004G146500 Sobic004G021100 Sobic004G021100 Sobic004G274200--Sobic004G021100 Sobic008G112800 Sobic008G112800 Sobic004G274200--Sobic008G112800 Sobic003G352200 Sobic003G352200 Sobic004G274200--Sobic003G352200 Sobic009G044800 Sobic009G044800 Sobic004G274200--Sobic009G044800 Sobic002G071500 Sobic002G071500 Sobic004G274200--Sobic002G071500 Sobic001G114000 Sobic001G114000 Sobic004G274200--Sobic001G114000 Sobic005G064000--Sobic008G113100 Sobic010G112100 Sobic010G112100 Sobic005G064000--Sobic010G112100 Sobic002G264200 Sobic002G264200 Sobic005G064000--Sobic002G264200 Sobic007G159900 Sobic007G159900 Sobic005G064000--Sobic007G159900 Sobic007G065400 Sobic007G065400 Sobic005G064000--Sobic007G065400 Sobic010G069100 Sobic010G069100 Sobic005G064000--Sobic010G069100 Sobic003G360400 Sobic003G360400 Sobic005G064000--Sobic003G360400 Sobic006G118700 Sobic006G118700 Sobic005G064000--Sobic006G118700 Sobic002G154000 Sobic002G154000 Sobic005G064000--Sobic002G154000 Sobic004G208900--Sobic009G040600 Sobic010G277500 Sobic010G277500 Sobic004G208900--Sobic010G277500 Sobic003G052200 Sobic003G052200 Sobic004G208900--Sobic003G052200 Sobic004G208900--Sobic010G139000 Sobic004G208900--Sobic008G113100 Sobic002G006900 Sobic002G006900 Sobic004G208900--Sobic002G006900 Sobic008G028700 Sobic008G028700 Sobic004G208900--Sobic008G028700 Sobic004G208900--Sobic003G280800 Sobic009G126400 Sobic009G126400 Sobic004G208900--Sobic009G126400 Sobic001G363500--Sobic005G112300 Sobic007G062800 Sobic007G062800 Sobic001G363500--Sobic007G062800 Sobic010G247800 Sobic010G247800 Sobic001G363500--Sobic010G247800 Sobic002G299700 Sobic002G299700 Sobic001G363500--Sobic002G299700 Sobic001G363500--Sobic010G112100 Sobic001G363500--Sobic004G242400 Sobic001G433800 Sobic001G433800 Sobic001G363500--Sobic001G433800 Sobic010G279450 Sobic010G279450 Sobic001G363500--Sobic010G279450 Sobic001G363500--Sobic010G139000 Sobic008G047800--Sobic002G006900 Sobic004G084300 Sobic004G084300 Sobic008G047800--Sobic004G084300 Sobic001G512700 Sobic001G512700 Sobic008G047800--Sobic001G512700 Sobic001G155000 Sobic001G155000 Sobic008G047800--Sobic001G155000 Sobic008G047800--Sobic009G040600 Sobic007G011300 Sobic007G011300 Sobic008G047800--Sobic007G011300 Sobic007G217000 Sobic007G217000 Sobic008G047800--Sobic007G217000 Sobic008G047800--Sobic004G274200 Sobic008G047800--Sobic002G309600 Sobic004G258700 Sobic004G258700 Sobic008G113100--Sobic004G258700 Sobic008G113100--Sobic008G028700 Sobic008G113100--Sobic005G064000 Sobic008G113100--Sobic007G065400 Sobic001G456900 Sobic001G456900 Sobic008G113100--Sobic001G456900 Sobic009G024000 Sobic009G024000 Sobic008G113100--Sobic009G024000 Sobic008G113100--Sobic009G040600 Sobic008G113100--Sobic004G208900 Sobic004G039200 Sobic004G039200 Sobic008G113100--Sobic004G039200
Octagon: transcription factors


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