Gene annotation
Transcriptome id Sobic.006G039000.1
Synonym
Functional annotation -
UniProt A0A1B6PJY1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G150650 - -
2 Sobic.002G210800 hypothetical protein -
3 Sobic.008G162600 fatty acid hydroxylase, putative, expressed -
4 Sobic.005G216000 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
5 Sobic.004G162400 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
6 Sobic.006G017500 Leucine Rich Repeat family protein, expressed -
7 Sobic.003G109250 - -
8 Sobic.002G229650 - -
9 Sobic.007G035000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
10 Sobic.010G057633 - K13993: HSP20 family protein
11 Sobic.006G125400 steroid nuclear receptor, ligand-binding, putative, expressed -
12 Sobic.003G315500 adhesive/proline-rich protein, putative, expressed -
13 Sobic.009G161000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
14 Sobic.010G125300 Leucine Rich Repeat family protein, expressed -
15 Sobic.009G203700 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA18 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
16 Sobic.004G255000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aspartic proteinase nepenthesin-2 precursor, putative, expressed -
17 Sobic.003G398100 antigen peptide transporter-like 1, chloroplast precursor, putative, expressed -
18 Sobic.008G153400 peptidase, putative, expressed K18151: ureidoglycolate amidohydrolase
19 Sobic.003G252300 universal stress protein domain containing protein, putative, expressed -
20 Sobic.001G207400 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1


Gene co-expression network
sample Sobic006G039000 Sobic006G039000 Sobic001G150650 Sobic001G150650 Sobic006G039000--Sobic001G150650 Sobic002G210800 Sobic002G210800 Sobic006G039000--Sobic002G210800 Sobic008G162600 Sobic008G162600 Sobic006G039000--Sobic008G162600 Sobic005G216000 Sobic005G216000 Sobic006G039000--Sobic005G216000 Sobic004G162400 Sobic004G162400 Sobic006G039000--Sobic004G162400 Sobic006G017500 Sobic006G017500 Sobic006G039000--Sobic006G017500 Sobic003G109250 Sobic003G109250 Sobic006G039000--Sobic003G109250 Sobic002G229650 Sobic002G229650 Sobic006G039000--Sobic002G229650 Sobic007G035000 Sobic007G035000 Sobic006G039000--Sobic007G035000 Sobic001G150600 Sobic001G150600 Sobic001G150650--Sobic001G150600 Sobic004G255000 Sobic004G255000 Sobic001G150650--Sobic004G255000 Sobic003G087200 Sobic003G087200 Sobic001G150650--Sobic003G087200 Sobic006G100332 Sobic006G100332 Sobic001G150650--Sobic006G100332 Sobic009G029600 Sobic009G029600 Sobic001G150650--Sobic009G029600 Sobic008G153400 Sobic008G153400 Sobic001G150650--Sobic008G153400 Sobic002G085300 Sobic002G085300 Sobic001G150650--Sobic002G085300 Sobic001G162700 Sobic001G162700 Sobic001G150650--Sobic001G162700 Sobic003G259200 Sobic003G259200 Sobic001G150650--Sobic003G259200 Sobic005G221000 Sobic005G221000 Sobic002G210800--Sobic005G221000 Sobic007G034000 Sobic007G034000 Sobic002G210800--Sobic007G034000 Sobic010G212350 Sobic010G212350 Sobic002G210800--Sobic010G212350 Sobic003G315500 Sobic003G315500 Sobic002G210800--Sobic003G315500 Sobic001G069900 Sobic001G069900 Sobic002G210800--Sobic001G069900 Sobic002G210800--Sobic004G162400 Sobic009G120200 Sobic009G120200 Sobic002G210800--Sobic009G120200 Sobic009G161000 Sobic009G161000 Sobic002G210800--Sobic009G161000 Sobic005G178100 Sobic005G178100 Sobic002G210800--Sobic005G178100 Sobic008G162600--Sobic001G150650 Sobic002G020950 Sobic002G020950 Sobic008G162600--Sobic002G020950 Sobic006G100400 Sobic006G100400 Sobic008G162600--Sobic006G100400 Sobic010G170550 Sobic010G170550 Sobic008G162600--Sobic010G170550 Sobic001G412700 Sobic001G412700 Sobic008G162600--Sobic001G412700 Sobic008G162600--Sobic006G039000 Sobic008G162600--Sobic004G255000 Sobic003G269700 Sobic003G269700 Sobic008G162600--Sobic003G269700 Sobic005G216000--Sobic004G162400 Sobic005G216000--Sobic007G035000 Sobic002G420700 Sobic002G420700 Sobic005G216000--Sobic002G420700 Sobic005G215900 Sobic005G215900 Sobic005G216000--Sobic005G215900 Sobic002G304000 Sobic002G304000 Sobic005G216000--Sobic002G304000 Sobic005G231900 Sobic005G231900 Sobic005G216000--Sobic005G231900 Sobic003G244600 Sobic003G244600 Sobic005G216000--Sobic003G244600 Sobic003G105800 Sobic003G105800 Sobic005G216000--Sobic003G105800 Sobic005G216000--Sobic005G178100 Sobic004G162400--Sobic005G216000 Sobic004G162400--Sobic002G304000 Sobic004G162400--Sobic005G231900 Sobic004G101900 Sobic004G101900 Sobic004G162400--Sobic004G101900 Sobic004G162400--Sobic009G161000 Sobic004G162400--Sobic005G178100 Sobic003G355600 Sobic003G355600 Sobic004G162400--Sobic003G355600 Sobic009G126900 Sobic009G126900 Sobic004G162400--Sobic009G126900 Sobic001G015500 Sobic001G015500 Sobic004G162400--Sobic001G015500 Sobic010G125300 Sobic010G125300 Sobic006G017500--Sobic010G125300 Sobic006G017400 Sobic006G017400 Sobic006G017500--Sobic006G017400 Sobic006G016000 Sobic006G016000 Sobic006G017500--Sobic006G016000 Sobic006G017332 Sobic006G017332 Sobic006G017500--Sobic006G017332 Sobic001G282600 Sobic001G282600 Sobic006G017500--Sobic001G282600 Sobic004G225200 Sobic004G225200 Sobic006G017500--Sobic004G225200 Sobic006G017500--Sobic001G150650 Sobic004G329300 Sobic004G329300 Sobic006G017500--Sobic004G329300 Sobic003G265100 Sobic003G265100 Sobic006G017500--Sobic003G265100 Sobic006G064600 Sobic006G064600 Sobic003G109250--Sobic006G064600 Sobic004G265800 Sobic004G265800 Sobic003G109250--Sobic004G265800 Sobic002G215800 Sobic002G215800 Sobic003G109250--Sobic002G215800 Sobic001G462500 Sobic001G462500 Sobic003G109250--Sobic001G462500 Sobic009G133500 Sobic009G133500 Sobic003G109250--Sobic009G133500 Sobic003G322700 Sobic003G322700 Sobic003G109250--Sobic003G322700 Sobic007G004500 Sobic007G004500 Sobic003G109250--Sobic007G004500 Sobic010G107000 Sobic010G107000 Sobic003G109250--Sobic010G107000 Sobic006G204900 Sobic006G204900 Sobic003G109250--Sobic006G204900 Sobic001G409300 Sobic001G409300 Sobic002G229650--Sobic001G409300 Sobic004G211900 Sobic004G211900 Sobic002G229650--Sobic004G211900 Sobic004G211866 Sobic004G211866 Sobic002G229650--Sobic004G211866 Sobic006G146100 Sobic006G146100 Sobic002G229650--Sobic006G146100 Sobic001G092000 Sobic001G092000 Sobic002G229650--Sobic001G092000 Sobic001G062300 Sobic001G062300 Sobic002G229650--Sobic001G062300 Sobic003G397500 Sobic003G397500 Sobic002G229650--Sobic003G397500 Sobic001G235500 Sobic001G235500 Sobic002G229650--Sobic001G235500 Sobic007G210500 Sobic007G210500 Sobic002G229650--Sobic007G210500 Sobic007G035000--Sobic002G420700 Sobic007G035000--Sobic005G216000 Sobic007G035000--Sobic005G178100 Sobic007G035000--Sobic003G105800 Sobic007G035000--Sobic003G087200 Sobic004G071200 Sobic004G071200 Sobic007G035000--Sobic004G071200 Sobic007G035000--Sobic003G244600 Sobic009G114000 Sobic009G114000 Sobic007G035000--Sobic009G114000 Sobic009G034700 Sobic009G034700 Sobic007G035000--Sobic009G034700
Octagon: transcription factors


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