Gene annotation
Transcriptome id Sobic.006G044400.1
Synonym Sb06g011100, scpl20
Functional annotation OsSCP23 - Putative Serine Carboxypeptidase homologue, expressed
UniProt C5YE82
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF45
NCBI CDD KOG1282; Serine carboxypeptidases (lysosomal cathepsin A)
KEGG Orthology K16296; serine carboxypeptidase-like clade I
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT4G12910 : serine carboxypeptidase-like 20
RAP-DB (Rice) LOC_Os04g25560.1 : OsSCP23 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a025628 , Zm00025a055849
Brachypodium KQJ91720
Barley HORVU2Hr1G066820.18 , HORVU2Hr1G066820.10 , HORVU2Hr1G066820.12 , HORVU2Hr1G066820.13 , HORVU2Hr1G066820.14 , HORVU2Hr1G066820.15 , HORVU2Hr1G066820.16 , HORVU3Hr1G096830.15 , HORVU3Hr1G096830.13 , HORVU3Hr1G096830.12 , HORVU3Hr1G096830.11 , HORVU3Hr1G096830.10 , HORVU3Hr1G096830.9 , HORVU3Hr1G096830.8 , HORVU3Hr1G096830.5 , HORVU3Hr1G096830.4 , HORVU3Hr1G096830.3 , HORVU3Hr1G096830.2 , HORVU3Hr1G096830.1 , HORVU2Hr1G066820.8 , HORVU2Hr1G066820.9 , HORVU2Hr1G066820.2 , HORVU2Hr1G066820.3 , HORVU2Hr1G066820.1 , HORVU2Hr1G066820.6 , HORVU2Hr1G066820.7 , HORVU2Hr1G066820.4
Wheat TraesCS3B02G481300 , TraesCS2B02G291700 , TraesCS3D02G173000 , TraesCS2D02G273000 , TraesCS2D02G273000 , TraesCS3D02G438800 , TraesCS2A02G274000 , TraesCS3A02G446200 , TraesCS3B02G197700 , TraesCS3B02G197700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G193700 carbamoyl-phosphate synthase large chain, putative, expressed K01955: carB, carbamoyl-phosphate synthase large subunit
2 Sobic.010G198000 tryptophan synthase beta chain 2, putative, expressed K06001: tryptophan synthase beta chain
3 Sobic.004G016400 CDP-alcohol phosphatidyltransferase, putative, expressed K00993: ethanolaminephosphotransferase
4 Sobic.004G152100 expressed protein -
5 Sobic.002G121300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsSCP56 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
6 Sobic.002G281800 expressed protein -
7 Sobic.001G295300 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
8 Sobic.002G301700 amidase, putative, expressed K01426: E3.5.1.4, amidase
9 Sobic.001G447700 expressed protein -
10 Sobic.002G303300 anthranilate phosphoribosyltransferase, putative, expressed -
11 Sobic.004G228200 thioredoxin, putative, expressed K03671: thioredoxin 1
12 Sobic.001G067300 histidinol dehydrogenase, chloroplast precursor, putative, expressed K00013: histidinol dehydrogenase
13 Sobic.006G256600 expressed protein -
14 Sobic.010G255100 delta-aminolevulinic acid dehydratase, chloroplast precursor, putative, expressed K01698: hemB, porphobilinogen synthase
15 Sobic.003G085000 sufB/sufD domain containing protein, putative, expressed K09015: Fe-S cluster assembly protein SufD
16 Sobic.007G095500 expressed protein -
17 Sobic.001G048200 elongation factor P, putative, expressed -
18 Sobic.001G379700 uroporphyrinogen decarboxylase, putative, expressed K01599: hemE, uroporphyrinogen decarboxylase
19 Sobic.001G291900 expressed protein -
20 Sobic.003G008900 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase


Gene co-expression network
sample Sobic006G044400 Sobic006G044400 Sobic003G193700 Sobic003G193700 Sobic006G044400--Sobic003G193700 Sobic010G198000 Sobic010G198000 Sobic006G044400--Sobic010G198000 Sobic004G016400 Sobic004G016400 Sobic006G044400--Sobic004G016400 Sobic004G152100 Sobic004G152100 Sobic006G044400--Sobic004G152100 Sobic002G121300 Sobic002G121300 Sobic006G044400--Sobic002G121300 Sobic002G281800 Sobic002G281800 Sobic006G044400--Sobic002G281800 Sobic001G295300 Sobic001G295300 Sobic006G044400--Sobic001G295300 Sobic002G301700 Sobic002G301700 Sobic006G044400--Sobic002G301700 Sobic001G447700 Sobic001G447700 Sobic006G044400--Sobic001G447700 Sobic006G256600 Sobic006G256600 Sobic003G193700--Sobic006G256600 Sobic004G307400 Sobic004G307400 Sobic003G193700--Sobic004G307400 Sobic003G193700--Sobic004G016400 Sobic001G291900 Sobic001G291900 Sobic003G193700--Sobic001G291900 Sobic010G023700 Sobic010G023700 Sobic003G193700--Sobic010G023700 Sobic003G193700--Sobic001G295300 Sobic003G387100 Sobic003G387100 Sobic003G193700--Sobic003G387100 Sobic010G255100 Sobic010G255100 Sobic003G193700--Sobic010G255100 Sobic005G184300 Sobic005G184300 Sobic003G193700--Sobic005G184300 Sobic010G198000--Sobic001G447700 Sobic010G218600 Sobic010G218600 Sobic010G198000--Sobic010G218600 Sobic010G198000--Sobic006G256600 Sobic001G029100 Sobic001G029100 Sobic010G198000--Sobic001G029100 Sobic010G198000--Sobic003G193700 Sobic003G085000 Sobic003G085000 Sobic010G198000--Sobic003G085000 Sobic010G198000--Sobic010G255100 Sobic001G391900 Sobic001G391900 Sobic010G198000--Sobic001G391900 Sobic010G198000--Sobic001G295300 Sobic005G149400 Sobic005G149400 Sobic004G016400--Sobic005G149400 Sobic001G025400 Sobic001G025400 Sobic004G016400--Sobic001G025400 Sobic004G016400--Sobic003G387100 Sobic004G016400--Sobic004G307400 Sobic009G030900 Sobic009G030900 Sobic004G016400--Sobic009G030900 Sobic001G309300 Sobic001G309300 Sobic004G016400--Sobic001G309300 Sobic009G059300 Sobic009G059300 Sobic004G016400--Sobic009G059300 Sobic004G336000 Sobic004G336000 Sobic004G016400--Sobic004G336000 Sobic004G016400--Sobic001G291900 Sobic004G152100--Sobic001G391900 Sobic004G152100--Sobic001G447700 Sobic004G152100--Sobic010G218600 Sobic004G152100--Sobic003G085000 Sobic004G152100--Sobic006G256600 Sobic003G170200 Sobic003G170200 Sobic004G152100--Sobic003G170200 Sobic005G127000 Sobic005G127000 Sobic004G152100--Sobic005G127000 Sobic004G152100--Sobic002G281800 Sobic002G102200 Sobic002G102200 Sobic004G152100--Sobic002G102200 Sobic003G260900 Sobic003G260900 Sobic002G121300--Sobic003G260900 Sobic002G121300--Sobic001G295300 Sobic002G121300--Sobic003G085000 Sobic004G228200 Sobic004G228200 Sobic002G121300--Sobic004G228200 Sobic007G208300 Sobic007G208300 Sobic002G121300--Sobic007G208300 Sobic006G145500 Sobic006G145500 Sobic002G121300--Sobic006G145500 Sobic008G090900 Sobic008G090900 Sobic002G121300--Sobic008G090900 Sobic008G067100 Sobic008G067100 Sobic002G121300--Sobic008G067100 Sobic009G093900 Sobic009G093900 Sobic002G121300--Sobic009G093900 Sobic010G080300 Sobic010G080300 Sobic002G281800--Sobic010G080300 Sobic003G291400 Sobic003G291400 Sobic002G281800--Sobic003G291400 Sobic008G072700 Sobic008G072700 Sobic002G281800--Sobic008G072700 Sobic007G046500 Sobic007G046500 Sobic002G281800--Sobic007G046500 Sobic007G029100 Sobic007G029100 Sobic002G281800--Sobic007G029100 Sobic009G190800 Sobic009G190800 Sobic002G281800--Sobic009G190800 Sobic003G310100 Sobic003G310100 Sobic002G281800--Sobic003G310100 Sobic002G281800--Sobic004G152100 Sobic009G029700 Sobic009G029700 Sobic002G281800--Sobic009G029700 Sobic001G295300--Sobic001G291900 Sobic003G008900 Sobic003G008900 Sobic001G295300--Sobic003G008900 Sobic001G308800 Sobic001G308800 Sobic001G295300--Sobic001G308800 Sobic001G295300--Sobic001G447700 Sobic001G006400 Sobic001G006400 Sobic001G295300--Sobic001G006400 Sobic001G295300--Sobic007G208300 Sobic003G022300 Sobic003G022300 Sobic001G295300--Sobic003G022300 Sobic004G227200 Sobic004G227200 Sobic001G295300--Sobic004G227200 Sobic001G104800 Sobic001G104800 Sobic001G295300--Sobic001G104800 Sobic004G023200 Sobic004G023200 Sobic002G301700--Sobic004G023200 Sobic002G033800 Sobic002G033800 Sobic002G301700--Sobic002G033800 Sobic010G019700 Sobic010G019700 Sobic002G301700--Sobic010G019700 Sobic002G301600 Sobic002G301600 Sobic002G301700--Sobic002G301600 Sobic001G379700 Sobic001G379700 Sobic002G301700--Sobic001G379700 Sobic002G301700--Sobic001G308800 Sobic001G527000 Sobic001G527000 Sobic002G301700--Sobic001G527000 Sobic010G208400 Sobic010G208400 Sobic002G301700--Sobic010G208400 Sobic002G353300 Sobic002G353300 Sobic002G301700--Sobic002G353300 Sobic001G447700--Sobic001G291900 Sobic001G447700--Sobic003G085000 Sobic001G447700--Sobic006G256600 Sobic001G035800 Sobic001G035800 Sobic001G447700--Sobic001G035800 Sobic001G447700--Sobic001G104800 Sobic002G198600 Sobic002G198600 Sobic001G447700--Sobic002G198600 Sobic001G447700--Sobic001G295300 Sobic001G447700--Sobic001G308800 Sobic006G107600 Sobic006G107600 Sobic001G447700--Sobic006G107600
Octagon: transcription factors


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