Gene annotation
Transcriptome id Sobic.006G104900.1
Synonym Sb06g018800
Functional annotation aldose 1-epimerase, putative, expressed
UniProt C5Y9T0
Pfam PF01263
Panther DB PTHR10091 PTHR10091:SF3
NCBI CDD KOG1604; Predicted mutarotase
KEGG Orthology K01785; galM, aldose 1-epimerase
Gene Ontology GO:0016853; isomerase activity GO:0005975carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT5G15140 : Galactose mutarotase-like superfamily protein
RAP-DB (Rice) LOC_Os04g38530.1 : aldose 1-epimerase, putative, expressed
MaizeGDB (Corn) Zm00025a020797 , Zm00025a011134 , Zm00025a002673 , Zm00025a056196
Brachypodium KQK00016 , KQJ82952 , KQJ82953 , KQJ82956
Barley HORVU2Hr1G080140.1 , HORVU2Hr1G080140.3 , HORVU2Hr1G080140.2 , HORVU3Hr1G091280.1 , HORVU2Hr1G080070.3 , HORVU2Hr1G080070.2
Wheat TraesCS3A02G408400 , TraesCS7D02G163100 , TraesCS7D02G163100 , TraesCS2A02G343900 , TraesCS2A02G343600 , TraesCS2A02G343600 , TraesCS3B02G442100 , TraesCS2B02G341200 , TraesCS3D02G403500 , TraesCS3D02G403500 , TraesCS2B02G341300 , TraesCS2D02G322100 , TraesCS2D02G322200 , TraesCS2B02G341300 , TraesCS2B02G341400 , TraesCS2B02G341400 , TraesCS2D02G321900 , TraesCS2A02G343800
Populus -


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cDNA sequences
Sobic.006G104900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G390400 expressed protein -
2 Sobic.002G247200 jmjC domain-containing protein 5, putative, expressed K10277: KDM8, lysine-specific demethylase 8
3 Sobic.006G203200 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
4 Sobic.006G261100 UBX domain-containing protein, putative, expressed -
5 Sobic.003G433500 Putative splicing factor(PubMedID : 24356560)@serine/arginine repetitive matrix protein 1, putative, expressed K14325: RNA-binding protein with serine-rich domain 1
6 Sobic.002G002500 tobamovirus multiplication protein, putative, expressed -
7 Sobic.006G160000 leucine-rich repeat family protein, putative, expressed -
8 Sobic.002G362300 prefoldin, putative, expressed -
9 Sobic.001G063100 DUF593 domain containing protein, expressed -
10 Sobic.008G169800 galactosyltransferase family protein, putative, expressed -
11 Sobic.001G230500 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4
12 Sobic.008G156200 zinc finger family protein, putative, expressed K16277: E3 ubiquitin-protein ligase DRIP
13 Sobic.009G013700 pectinacetylesterase domain containing protein, expressed -
14 Sobic.001G418400 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@cadmium tolerance factor, putative, expressed -
15 Sobic.001G424500 mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
16 Sobic.002G016900 OsFBD13 - F-box and FBD domain containing protein, expressed -
17 Sobic.003G244700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
18 Sobic.009G022100 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
19 Sobic.009G126800 exonuclease, putative, expressed K18417: ERI1 exoribonuclease 2
20 Sobic.005G120600 Highest expression level in embryo(PubMedID : 27501690)@OsSPL19 - SBP-box gene family member, expressed -


Gene co-expression network
sample Sobic006G104900 Sobic006G104900 Sobic002G390400 Sobic002G390400 Sobic006G104900--Sobic002G390400 Sobic002G247200 Sobic002G247200 Sobic006G104900--Sobic002G247200 Sobic006G203200 Sobic006G203200 Sobic006G104900--Sobic006G203200 Sobic006G261100 Sobic006G261100 Sobic006G104900--Sobic006G261100 Sobic003G433500 Sobic003G433500 Sobic006G104900--Sobic003G433500 Sobic002G002500 Sobic002G002500 Sobic006G104900--Sobic002G002500 Sobic006G160000 Sobic006G160000 Sobic006G104900--Sobic006G160000 Sobic002G362300 Sobic002G362300 Sobic006G104900--Sobic002G362300 Sobic001G063100 Sobic001G063100 Sobic006G104900--Sobic001G063100 Sobic001G135500 Sobic001G135500 Sobic002G390400--Sobic001G135500 Sobic003G415100 Sobic003G415100 Sobic002G390400--Sobic003G415100 Sobic009G069200 Sobic009G069200 Sobic002G390400--Sobic009G069200 Sobic005G198200 Sobic005G198200 Sobic002G390400--Sobic005G198200 Sobic005G030100 Sobic005G030100 Sobic002G390400--Sobic005G030100 Sobic009G030400 Sobic009G030400 Sobic002G390400--Sobic009G030400 Sobic009G113100 Sobic009G113100 Sobic002G390400--Sobic009G113100 Sobic008G156200 Sobic008G156200 Sobic002G390400--Sobic008G156200 Sobic001G429200 Sobic001G429200 Sobic002G390400--Sobic001G429200 Sobic003G051100 Sobic003G051100 Sobic002G247200--Sobic003G051100 Sobic002G247200--Sobic001G429200 Sobic001G346700 Sobic001G346700 Sobic002G247200--Sobic001G346700 Sobic008G169800 Sobic008G169800 Sobic002G247200--Sobic008G169800 Sobic002G247200--Sobic003G415100 Sobic001G116100 Sobic001G116100 Sobic002G247200--Sobic001G116100 Sobic005G180800 Sobic005G180800 Sobic002G247200--Sobic005G180800 Sobic002G247200--Sobic006G203200 Sobic001G218200 Sobic001G218200 Sobic002G247200--Sobic001G218200 Sobic002G016900 Sobic002G016900 Sobic006G203200--Sobic002G016900 Sobic003G244700 Sobic003G244700 Sobic006G203200--Sobic003G244700 Sobic002G253600 Sobic002G253600 Sobic006G203200--Sobic002G253600 Sobic006G120400 Sobic006G120400 Sobic006G203200--Sobic006G120400 Sobic002G341100 Sobic002G341100 Sobic006G203200--Sobic002G341100 Sobic001G130700 Sobic001G130700 Sobic006G203200--Sobic001G130700 Sobic006G203200--Sobic008G156200 Sobic009G242800 Sobic009G242800 Sobic006G203200--Sobic009G242800 Sobic006G203200--Sobic002G002500 Sobic001G038100 Sobic001G038100 Sobic006G261100--Sobic001G038100 Sobic010G095700 Sobic010G095700 Sobic006G261100--Sobic010G095700 Sobic002G276900 Sobic002G276900 Sobic006G261100--Sobic002G276900 Sobic007G117100 Sobic007G117100 Sobic006G261100--Sobic007G117100 Sobic009G022100 Sobic009G022100 Sobic006G261100--Sobic009G022100 Sobic006G120800 Sobic006G120800 Sobic006G261100--Sobic006G120800 Sobic001G390500 Sobic001G390500 Sobic006G261100--Sobic001G390500 Sobic009G216000 Sobic009G216000 Sobic006G261100--Sobic009G216000 Sobic003G354100 Sobic003G354100 Sobic006G261100--Sobic003G354100 Sobic009G195200 Sobic009G195200 Sobic003G433500--Sobic009G195200 Sobic003G355000 Sobic003G355000 Sobic003G433500--Sobic003G355000 Sobic002G045400 Sobic002G045400 Sobic003G433500--Sobic002G045400 Sobic003G433500--Sobic009G216000 Sobic003G433500--Sobic003G354100 Sobic006G267300 Sobic006G267300 Sobic003G433500--Sobic006G267300 Sobic006G248500 Sobic006G248500 Sobic003G433500--Sobic006G248500 Sobic003G433500--Sobic002G362300 Sobic002G259800 Sobic002G259800 Sobic003G433500--Sobic002G259800 Sobic002G002500--Sobic009G022100 Sobic002G067800 Sobic002G067800 Sobic002G002500--Sobic002G067800 Sobic008G073000 Sobic008G073000 Sobic002G002500--Sobic008G073000 Sobic002G002500--Sobic002G045400 Sobic008G165100 Sobic008G165100 Sobic002G002500--Sobic008G165100 Sobic002G002500--Sobic003G433500 Sobic005G059100 Sobic005G059100 Sobic002G002500--Sobic005G059100 Sobic002G002500--Sobic009G216000 Sobic002G159200 Sobic002G159200 Sobic002G002500--Sobic002G159200 Sobic006G187200 Sobic006G187200 Sobic006G160000--Sobic006G187200 Sobic002G153100 Sobic002G153100 Sobic006G160000--Sobic002G153100 Sobic003G086500 Sobic003G086500 Sobic006G160000--Sobic003G086500 Sobic004G079700 Sobic004G079700 Sobic006G160000--Sobic004G079700 Sobic006G109500 Sobic006G109500 Sobic006G160000--Sobic006G109500 Sobic006G018300 Sobic006G018300 Sobic006G160000--Sobic006G018300 Sobic001G203700 Sobic001G203700 Sobic006G160000--Sobic001G203700 Sobic008G062900 Sobic008G062900 Sobic006G160000--Sobic008G062900 Sobic009G079100 Sobic009G079100 Sobic006G160000--Sobic009G079100 Sobic005G009200 Sobic005G009200 Sobic002G362300--Sobic005G009200 Sobic001G371000 Sobic001G371000 Sobic002G362300--Sobic001G371000 Sobic002G362300--Sobic003G433500 Sobic005G229000 Sobic005G229000 Sobic002G362300--Sobic005G229000 Sobic002G362300--Sobic008G073000 Sobic009G030300 Sobic009G030300 Sobic002G362300--Sobic009G030300 Sobic002G095700 Sobic002G095700 Sobic002G362300--Sobic002G095700 Sobic005G030300 Sobic005G030300 Sobic002G362300--Sobic005G030300 Sobic009G044900 Sobic009G044900 Sobic002G362300--Sobic009G044900 Sobic002G177400 Sobic002G177400 Sobic001G063100--Sobic002G177400 Sobic002G347700 Sobic002G347700 Sobic001G063100--Sobic002G347700 Sobic001G063100--Sobic008G165100 Sobic001G063100--Sobic005G229000 Sobic007G155900 Sobic007G155900 Sobic001G063100--Sobic007G155900 Sobic005G007700 Sobic005G007700 Sobic001G063100--Sobic005G007700 Sobic010G194700 Sobic010G194700 Sobic001G063100--Sobic010G194700 Sobic007G002900 Sobic007G002900 Sobic001G063100--Sobic007G002900 Sobic001G063100--Sobic002G362300
Octagon: transcription factors


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