Gene annotation
Transcriptome id Sobic.006G235800.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PNJ5
Pfam -
Panther DB PTHR31827 PTHR31827:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64550 : loricrin-related
RAP-DB (Rice) LOC_Os04g54830.1 : expressed protein
MaizeGDB (Corn) Zm00025a009589 , Zm00025a037204
Brachypodium KQJ84884
Barley HORVU2Hr1G115620.1 , HORVU2Hr1G115620.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G235900 - -
2 Sobic.001G127200 zinc finger family protein, putative, expressed -
3 Sobic.001G193300 TBC domain containing protein, expressed -
4 Sobic.006G034500 elongation factor Tu, putative, expressed K03267: ERF3, peptide chain release factor subunit 3
5 Sobic.001G312900 transporter family protein, putative, expressed -
6 Sobic.009G243800 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
7 Sobic.008G003700 clathrin heavy chain, putative, expressed K04646: clathrin heavy chain
8 Sobic.004G004300 expressed protein -
9 Sobic.007G167200 OsSCP41 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
10 Sobic.003G194100 mitochondrial carrier protein, putative, expressed K15084: SLC25A16, GDA, solute carrier family 25 (mitochondrial carrier protein), member 16
11 Sobic.005G003300 clathrin heavy chain, putative, expressed K04646: clathrin heavy chain
12 Sobic.001G350700 Positive regulator of ABA(PubMedID : 30367619)@CAMK_CAMK_like.19 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
13 Sobic.009G020900 "Ca ATPase, IIB type"(PubMedID : 22196357)@calcium-transporting ATPase, endoplasmic reticulum-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
14 Sobic.001G415300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
15 Sobic.004G344901 - K10357: myosin V
16 Sobic.010G093100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@galactosyltransferase family protein, putative, expressed K14413: beta-1,3-galactosyltransferase
17 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
18 Sobic.004G255700 sucrase-related, putative, expressed -
19 Sobic.009G233200 Sucrose phosphate synthase genes(PubMedID : 24456189)@sucrose phosphate synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose-phosphate synthase, putative, expressed K00696: sucrose-phosphate synthase
20 Sobic.001G043100 EMB1745, putative, expressed K18723: nucleoporin GLE1


Gene co-expression network
sample Sobic006G235800 Sobic006G235800 Sobic006G235900 Sobic006G235900 Sobic006G235800--Sobic006G235900 Sobic001G127200 Sobic001G127200 Sobic006G235800--Sobic001G127200 Sobic001G193300 Sobic001G193300 Sobic006G235800--Sobic001G193300 Sobic006G034500 Sobic006G034500 Sobic006G235800--Sobic006G034500 Sobic001G312900 Sobic001G312900 Sobic006G235800--Sobic001G312900 Sobic009G243800 Sobic009G243800 Sobic006G235800--Sobic009G243800 Sobic008G003700 Sobic008G003700 Sobic006G235800--Sobic008G003700 Sobic004G004300 Sobic004G004300 Sobic006G235800--Sobic004G004300 Sobic007G167200 Sobic007G167200 Sobic006G235800--Sobic007G167200 Sobic006G235900--Sobic006G235800 Sobic006G247900 Sobic006G247900 Sobic006G235900--Sobic006G247900 Sobic004G016000 Sobic004G016000 Sobic006G235900--Sobic004G016000 Sobic007G054800 Sobic007G054800 Sobic006G235900--Sobic007G054800 Sobic001G110600 Sobic001G110600 Sobic006G235900--Sobic001G110600 Sobic008G135200 Sobic008G135200 Sobic006G235900--Sobic008G135200 Sobic001G404600 Sobic001G404600 Sobic006G235900--Sobic001G404600 Sobic008G088857 Sobic008G088857 Sobic006G235900--Sobic008G088857 Sobic006G247100 Sobic006G247100 Sobic006G235900--Sobic006G247100 Sobic004G261600 Sobic004G261600 Sobic001G127200--Sobic004G261600 Sobic003G104000 Sobic003G104000 Sobic001G127200--Sobic003G104000 Sobic001G415300 Sobic001G415300 Sobic001G127200--Sobic001G415300 Sobic010G004100 Sobic010G004100 Sobic001G127200--Sobic010G004100 Sobic002G031100 Sobic002G031100 Sobic001G127200--Sobic002G031100 Sobic002G137400 Sobic002G137400 Sobic001G127200--Sobic002G137400 Sobic004G344901 Sobic004G344901 Sobic001G127200--Sobic004G344901 Sobic004G358400 Sobic004G358400 Sobic001G127200--Sobic004G358400 Sobic003G227100 Sobic003G227100 Sobic001G127200--Sobic003G227100 Sobic009G068500 Sobic009G068500 Sobic001G193300--Sobic009G068500 Sobic008G089100 Sobic008G089100 Sobic001G193300--Sobic008G089100 Sobic004G257100 Sobic004G257100 Sobic001G193300--Sobic004G257100 Sobic002G359400 Sobic002G359400 Sobic001G193300--Sobic002G359400 Sobic008G033500 Sobic008G033500 Sobic001G193300--Sobic008G033500 Sobic004G202500 Sobic004G202500 Sobic001G193300--Sobic004G202500 Sobic003G176000 Sobic003G176000 Sobic001G193300--Sobic003G176000 Sobic001G007000 Sobic001G007000 Sobic001G193300--Sobic001G007000 Sobic008G124900 Sobic008G124900 Sobic001G193300--Sobic008G124900 Sobic004G145000 Sobic004G145000 Sobic006G034500--Sobic004G145000 Sobic001G440800 Sobic001G440800 Sobic006G034500--Sobic001G440800 Sobic006G034500--Sobic003G104000 Sobic002G256700 Sobic002G256700 Sobic006G034500--Sobic002G256700 Sobic009G201700 Sobic009G201700 Sobic006G034500--Sobic009G201700 Sobic008G055900 Sobic008G055900 Sobic006G034500--Sobic008G055900 Sobic002G142900 Sobic002G142900 Sobic006G034500--Sobic002G142900 Sobic004G088501 Sobic004G088501 Sobic006G034500--Sobic004G088501 Sobic006G034500--Sobic004G261600 Sobic001G362200 Sobic001G362200 Sobic001G312900--Sobic001G362200 Sobic003G109700 Sobic003G109700 Sobic001G312900--Sobic003G109700 Sobic002G134600 Sobic002G134600 Sobic001G312900--Sobic002G134600 Sobic001G312900--Sobic004G004300 Sobic002G350600 Sobic002G350600 Sobic001G312900--Sobic002G350600 Sobic006G280000 Sobic006G280000 Sobic001G312900--Sobic006G280000 Sobic009G042700 Sobic009G042700 Sobic001G312900--Sobic009G042700 Sobic006G052500 Sobic006G052500 Sobic001G312900--Sobic006G052500 Sobic003G331400 Sobic003G331400 Sobic001G312900--Sobic003G331400 Sobic001G534800 Sobic001G534800 Sobic009G243800--Sobic001G534800 Sobic005G003300 Sobic005G003300 Sobic009G243800--Sobic005G003300 Sobic010G232600 Sobic010G232600 Sobic009G243800--Sobic010G232600 Sobic002G270500 Sobic002G270500 Sobic009G243800--Sobic002G270500 Sobic001G413900 Sobic001G413900 Sobic009G243800--Sobic001G413900 Sobic009G243800--Sobic008G003700 Sobic001G281100 Sobic001G281100 Sobic009G243800--Sobic001G281100 Sobic009G243800--Sobic004G004300 Sobic006G126100 Sobic006G126100 Sobic009G243800--Sobic006G126100 Sobic008G003700--Sobic005G003300 Sobic008G003700--Sobic004G344901 Sobic007G075500 Sobic007G075500 Sobic008G003700--Sobic007G075500 Sobic008G003700--Sobic001G404600 Sobic008G124800 Sobic008G124800 Sobic008G003700--Sobic008G124800 Sobic003G029600 Sobic003G029600 Sobic008G003700--Sobic003G029600 Sobic003G337300 Sobic003G337300 Sobic008G003700--Sobic003G337300 Sobic008G003700--Sobic004G261600 Sobic008G003700--Sobic007G054800 Sobic004G004300--Sobic001G281100 Sobic005G026200 Sobic005G026200 Sobic004G004300--Sobic005G026200 Sobic004G004300--Sobic001G534800 Sobic004G004300--Sobic006G126100 Sobic001G117200 Sobic001G117200 Sobic004G004300--Sobic001G117200 Sobic004G004200 Sobic004G004200 Sobic004G004300--Sobic004G004200 Sobic004G004300--Sobic001G415300 Sobic010G275500 Sobic010G275500 Sobic004G004300--Sobic010G275500 Sobic004G004300--Sobic005G003300 Sobic004G296400 Sobic004G296400 Sobic007G167200--Sobic004G296400 Sobic007G167200--Sobic001G312900 Sobic002G116900 Sobic002G116900 Sobic007G167200--Sobic002G116900 Sobic005G157000 Sobic005G157000 Sobic007G167200--Sobic005G157000 Sobic003G273600 Sobic003G273600 Sobic007G167200--Sobic003G273600 Sobic007G167200--Sobic004G004300 Sobic001G043100 Sobic001G043100 Sobic007G167200--Sobic001G043100 Sobic009G219000 Sobic009G219000 Sobic007G167200--Sobic009G219000 Sobic007G167200--Sobic001G193300
Octagon: transcription factors


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