Gene annotation
Transcriptome id Sobic.007G002600.2,Sobic.007G002600.1
Synonym Sb07g000430
Functional annotation zinc finger DHHC domain-containing protein, putative, expressed
UniProt C5YLE1
Pfam PF01529
Panther DB PTHR22883 PTHR22883:SF74
NCBI CDD KOG1311; DHHC-type Zn-finger proteins
KEGG Orthology K16675; palmitoyltransferase ZDHHC9/14/18
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT4G24630 : DHHC-type zinc finger family protein
RAP-DB (Rice) LOC_Os08g01300.1 : zinc finger DHHC domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a033671
Brachypodium KQJ94773 , PNT66493 , PNT66492 , KQJ94775 , KQJ94774
Barley -
Wheat TraesCS7D02G323000 , TraesCS7D02G323000 , TraesCS7B02G226900
Populus PNT57861 , PNT57862


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cDNA sequences
Sobic.007G002600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G372500 DUF803 domain containing, putative, expressed -
2 Sobic.003G313500 MATH domain containing protein, expressed -
3 Sobic.003G221900 helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.006G086500 STE_MEKK_ste11_MAP3K.16 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
5 Sobic.007G193700 Sua5/YciO/YrdC/YwlC family protein, putative, expressed -
6 Sobic.004G238900 methyltransferase domain containing protein, putative, expressed -
7 Sobic.001G481900 SAC domain containing protein, putative, expressed -
8 Sobic.003G247300 protein of unknown function DUF1296 domain containing protein, expressed -
9 Sobic.002G346200 expressed protein -
10 Sobic.006G133900 NIN, putative, expressed -
11 Sobic.001G268200 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.010G013200 CPuORF21 - conserved peptide uORF-containing transcript, expressed K08829: male germ cell-associated kinase
13 Sobic.001G191600 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
14 Sobic.003G222900 OsFtsH9 FtsH protease, homologue of AtFtsH11, expressed K08955: ATP-dependent metalloprotease
15 Sobic.007G020600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@MATE efflux protein, putative, expressed -
16 Sobic.004G306500 OsMADS22 - MADS-box family gene with MIKCc type-box, expressed -
17 Sobic.002G187700 expressed protein -
18 Sobic.003G146500 red chlorophyll catabolite reductase, putative, expressed K13545: RCCR, red chlorophyll catabolite reductase
19 Sobic.010G147100 VHS and GAT domain containing protein, expressed -
20 Sobic.003G190400 rossmann fold nucleotide-binding protein involved in DNA uptake, putative, expressed -


Gene co-expression network
sample Sobic007G002600 Sobic007G002600 Sobic003G372500 Sobic003G372500 Sobic007G002600--Sobic003G372500 Sobic003G313500 Sobic003G313500 Sobic007G002600--Sobic003G313500 Sobic003G221900 Sobic003G221900 Sobic007G002600--Sobic003G221900 Sobic006G086500 Sobic006G086500 Sobic007G002600--Sobic006G086500 Sobic007G193700 Sobic007G193700 Sobic007G002600--Sobic007G193700 Sobic004G238900 Sobic004G238900 Sobic007G002600--Sobic004G238900 Sobic001G481900 Sobic001G481900 Sobic007G002600--Sobic001G481900 Sobic003G247300 Sobic003G247300 Sobic007G002600--Sobic003G247300 Sobic002G346200 Sobic002G346200 Sobic007G002600--Sobic002G346200 Sobic007G075400 Sobic007G075400 Sobic003G372500--Sobic007G075400 Sobic010G147100 Sobic010G147100 Sobic003G372500--Sobic010G147100 Sobic003G316500 Sobic003G316500 Sobic003G372500--Sobic003G316500 Sobic001G050200 Sobic001G050200 Sobic003G372500--Sobic001G050200 Sobic009G191000 Sobic009G191000 Sobic003G372500--Sobic009G191000 Sobic010G227100 Sobic010G227100 Sobic003G372500--Sobic010G227100 Sobic001G534700 Sobic001G534700 Sobic003G372500--Sobic001G534700 Sobic003G372500--Sobic003G313500 Sobic001G390800 Sobic001G390800 Sobic003G372500--Sobic001G390800 Sobic003G313500--Sobic009G191000 Sobic003G422500 Sobic003G422500 Sobic003G313500--Sobic003G422500 Sobic002G411600 Sobic002G411600 Sobic003G313500--Sobic002G411600 Sobic001G540400 Sobic001G540400 Sobic003G313500--Sobic001G540400 Sobic004G034900 Sobic004G034900 Sobic003G313500--Sobic004G034900 Sobic001G289600 Sobic001G289600 Sobic003G313500--Sobic001G289600 Sobic009G053900 Sobic009G053900 Sobic003G313500--Sobic009G053900 Sobic002G008900 Sobic002G008900 Sobic003G313500--Sobic002G008900 Sobic001G365900 Sobic001G365900 Sobic003G313500--Sobic001G365900 Sobic001G122832 Sobic001G122832 Sobic003G221900--Sobic001G122832 Sobic003G221900--Sobic003G316500 Sobic003G340600 Sobic003G340600 Sobic003G221900--Sobic003G340600 Sobic001G389100 Sobic001G389100 Sobic003G221900--Sobic001G389100 Sobic010G021500 Sobic010G021500 Sobic003G221900--Sobic010G021500 Sobic006G133900 Sobic006G133900 Sobic003G221900--Sobic006G133900 Sobic003G221900--Sobic010G147100 Sobic001G332500 Sobic001G332500 Sobic003G221900--Sobic001G332500 Sobic003G029700 Sobic003G029700 Sobic003G221900--Sobic003G029700 Sobic001G191600 Sobic001G191600 Sobic006G086500--Sobic001G191600 Sobic010G013200 Sobic010G013200 Sobic006G086500--Sobic010G013200 Sobic002G294800 Sobic002G294800 Sobic006G086500--Sobic002G294800 Sobic001G268200 Sobic001G268200 Sobic006G086500--Sobic001G268200 Sobic008G172300 Sobic008G172300 Sobic006G086500--Sobic008G172300 Sobic006G086500--Sobic003G221900 Sobic006G086500--Sobic003G340600 Sobic004G181700 Sobic004G181700 Sobic006G086500--Sobic004G181700 Sobic006G086500--Sobic001G389100 Sobic004G263600 Sobic004G263600 Sobic007G193700--Sobic004G263600 Sobic003G086900 Sobic003G086900 Sobic007G193700--Sobic003G086900 Sobic004G200200 Sobic004G200200 Sobic007G193700--Sobic004G200200 Sobic004G174200 Sobic004G174200 Sobic007G193700--Sobic004G174200 Sobic002G134200 Sobic002G134200 Sobic007G193700--Sobic002G134200 Sobic010G239600 Sobic010G239600 Sobic007G193700--Sobic010G239600 Sobic003G139900 Sobic003G139900 Sobic007G193700--Sobic003G139900 Sobic003G247500 Sobic003G247500 Sobic007G193700--Sobic003G247500 Sobic003G396200 Sobic003G396200 Sobic007G193700--Sobic003G396200 Sobic003G067100 Sobic003G067100 Sobic004G238900--Sobic003G067100 Sobic005G014700 Sobic005G014700 Sobic004G238900--Sobic005G014700 Sobic004G359100 Sobic004G359100 Sobic004G238900--Sobic004G359100 Sobic001G102500 Sobic001G102500 Sobic004G238900--Sobic001G102500 Sobic002G343400 Sobic002G343400 Sobic004G238900--Sobic002G343400 Sobic003G369400 Sobic003G369400 Sobic004G238900--Sobic003G369400 Sobic007G023200 Sobic007G023200 Sobic004G238900--Sobic007G023200 Sobic010G255100 Sobic010G255100 Sobic004G238900--Sobic010G255100 Sobic004G163800 Sobic004G163800 Sobic004G238900--Sobic004G163800 Sobic002G187700 Sobic002G187700 Sobic001G481900--Sobic002G187700 Sobic004G306500 Sobic004G306500 Sobic001G481900--Sobic004G306500 Sobic003G198800 Sobic003G198800 Sobic001G481900--Sobic003G198800 Sobic001G481900--Sobic003G372500 Sobic001G481900--Sobic010G147100 Sobic003G115900 Sobic003G115900 Sobic001G481900--Sobic003G115900 Sobic008G059100 Sobic008G059100 Sobic001G481900--Sobic008G059100 Sobic001G128300 Sobic001G128300 Sobic001G481900--Sobic001G128300 Sobic007G164000 Sobic007G164000 Sobic001G481900--Sobic007G164000 Sobic003G247300--Sobic001G050200 Sobic003G247300--Sobic003G313500 Sobic010G139600 Sobic010G139600 Sobic003G247300--Sobic010G139600 Sobic005G001000 Sobic005G001000 Sobic003G247300--Sobic005G001000 Sobic005G028600 Sobic005G028600 Sobic003G247300--Sobic005G028600 Sobic003G247300--Sobic002G008900 Sobic003G205200 Sobic003G205200 Sobic003G247300--Sobic003G205200 Sobic004G269200 Sobic004G269200 Sobic003G247300--Sobic004G269200 Sobic003G247300--Sobic009G191000 Sobic003G155100 Sobic003G155100 Sobic002G346200--Sobic003G155100 Sobic008G001200 Sobic008G001200 Sobic002G346200--Sobic008G001200 Sobic003G196300 Sobic003G196300 Sobic002G346200--Sobic003G196300 Sobic006G050700 Sobic006G050700 Sobic002G346200--Sobic006G050700 Sobic002G346200--Sobic001G365900 Sobic002G346200--Sobic001G534700 Sobic010G206900 Sobic010G206900 Sobic002G346200--Sobic010G206900 Sobic001G194200 Sobic001G194200 Sobic002G346200--Sobic001G194200 Sobic006G219600 Sobic006G219600 Sobic002G346200--Sobic006G219600
Octagon: transcription factors


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