Gene annotation
Transcriptome id Sobic.007G022900.3,Sobic.007G022900.1,Sobic.007G022900.2
Synonym Sb07g002020
Functional annotation methyltransferase domain containing protein, expressed
UniProt A0A1B6PF27
Pfam PF08241
Panther DB PTHR10108 PTHR10108:SF874
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G24480 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os08g02600.1 : methyltransferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a040314
Brachypodium KQJ94902
Barley HORVU7Hr1G074970.2
Wheat -
Populus -


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cDNA sequences
Sobic.007G022900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G288601 - -
2 Sobic.003G248300 kinase, pfkB family, putative, expressed K00852: rbsK, ribokinase
3 Sobic.008G040400 DUF584 domain containing protein, putative, expressed -
4 Sobic.004G129100 lipase class 3 family protein, putative, expressed -
5 Sobic.010G018500 expressed protein -
6 Sobic.001G443300 tetratricopeptide repeat domain containing protein, expressed K03353: APC6, anaphase-promoting complex subunit 6
7 Sobic.009G244900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cycloartenol-C-24-methyltransferase 1, putative, expressed K00559: SMT1, sterol 24-C-methyltransferase
8 Sobic.009G228600 CHCH domain containing protein, expressed K18183: cytochrome c oxidase assembly protein subunit 19
9 Sobic.004G356300 expressed protein -
10 Sobic.004G149100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@gibberellin 20 oxidase 2, putative, expressed -
11 Sobic.004G218600 succinyl-CoA ligase beta-chain, mitochondrial precursor, putative, expressed K01900: succinyl-CoA synthetase beta subunit
12 Sobic.002G111500 Fatty acyl-ACP thioesterases B FATB (At)(PubMedID : 27208977)@myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B
13 Sobic.002G377200 expressed protein -
14 Sobic.002G090500 calreticulin precursor protein, putative, expressed K08057: calreticulin
15 Sobic.001G473400 NADH dehydrogenase 1 alpha subcomplex subunit 13, putative, expressed K11353: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13
16 Sobic.002G153000 oxidoreductase domain protein, putative, expressed -
17 Sobic.003G286200 expressed protein -
18 Sobic.003G170300 LYR motif containing protein, putative, expressed K03950: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 6
19 Sobic.004G116400 OsFBK5 - F-box domain and kelch repeat containing protein, expressed -
20 Sobic.001G413100 nucleotide binding protein, putative, expressed -


Gene co-expression network
sample Sobic007G022900 Sobic007G022900 Sobic001G288601 Sobic001G288601 Sobic007G022900--Sobic001G288601 Sobic003G248300 Sobic003G248300 Sobic007G022900--Sobic003G248300 Sobic008G040400 Sobic008G040400 Sobic007G022900--Sobic008G040400 Sobic004G129100 Sobic004G129100 Sobic007G022900--Sobic004G129100 Sobic010G018500 Sobic010G018500 Sobic007G022900--Sobic010G018500 Sobic001G443300 Sobic001G443300 Sobic007G022900--Sobic001G443300 Sobic009G244900 Sobic009G244900 Sobic007G022900--Sobic009G244900 Sobic009G228600 Sobic009G228600 Sobic007G022900--Sobic009G228600 Sobic004G356300 Sobic004G356300 Sobic007G022900--Sobic004G356300 Sobic001G288601--Sobic007G022900 Sobic010G225001 Sobic010G225001 Sobic001G288601--Sobic010G225001 Sobic007G003000 Sobic007G003000 Sobic001G288601--Sobic007G003000 Sobic004G290300 Sobic004G290300 Sobic001G288601--Sobic004G290300 Sobic007G003700 Sobic007G003700 Sobic001G288601--Sobic007G003700 Sobic007G090424 Sobic007G090424 Sobic001G288601--Sobic007G090424 Sobic007G190200 Sobic007G190200 Sobic001G288601--Sobic007G190200 Sobic002G342600 Sobic002G342600 Sobic001G288601--Sobic002G342600 Sobic001G345900 Sobic001G345900 Sobic001G288601--Sobic001G345900 Sobic003G170300 Sobic003G170300 Sobic003G248300--Sobic003G170300 Sobic002G317600 Sobic002G317600 Sobic003G248300--Sobic002G317600 Sobic003G286200 Sobic003G286200 Sobic003G248300--Sobic003G286200 Sobic005G110526 Sobic005G110526 Sobic003G248300--Sobic005G110526 Sobic006G129900 Sobic006G129900 Sobic003G248300--Sobic006G129900 Sobic001G473400 Sobic001G473400 Sobic003G248300--Sobic001G473400 Sobic006G038200 Sobic006G038200 Sobic003G248300--Sobic006G038200 Sobic007G043600 Sobic007G043600 Sobic003G248300--Sobic007G043600 Sobic010G258000 Sobic010G258000 Sobic003G248300--Sobic010G258000 Sobic008G188400 Sobic008G188400 Sobic008G040400--Sobic008G188400 Sobic007G212100 Sobic007G212100 Sobic008G040400--Sobic007G212100 Sobic004G232500 Sobic004G232500 Sobic008G040400--Sobic004G232500 Sobic004G173700 Sobic004G173700 Sobic008G040400--Sobic004G173700 Sobic005G108700 Sobic005G108700 Sobic008G040400--Sobic005G108700 Sobic003G202400 Sobic003G202400 Sobic008G040400--Sobic003G202400 Sobic003G137600 Sobic003G137600 Sobic008G040400--Sobic003G137600 Sobic003G284100 Sobic003G284100 Sobic008G040400--Sobic003G284100 Sobic001G365700 Sobic001G365700 Sobic008G040400--Sobic001G365700 Sobic003G028200 Sobic003G028200 Sobic004G129100--Sobic003G028200 Sobic002G281600 Sobic002G281600 Sobic004G129100--Sobic002G281600 Sobic001G518600 Sobic001G518600 Sobic004G129100--Sobic001G518600 Sobic001G011000 Sobic001G011000 Sobic004G129100--Sobic001G011000 Sobic002G186300 Sobic002G186300 Sobic004G129100--Sobic002G186300 Sobic004G265600 Sobic004G265600 Sobic004G129100--Sobic004G265600 Sobic008G085400 Sobic008G085400 Sobic004G129100--Sobic008G085400 Sobic002G166400 Sobic002G166400 Sobic004G129100--Sobic002G166400 Sobic005G129201 Sobic005G129201 Sobic004G129100--Sobic005G129201 Sobic001G146000 Sobic001G146000 Sobic010G018500--Sobic001G146000 Sobic002G232400 Sobic002G232400 Sobic010G018500--Sobic002G232400 Sobic003G266400 Sobic003G266400 Sobic010G018500--Sobic003G266400 Sobic001G543400 Sobic001G543400 Sobic010G018500--Sobic001G543400 Sobic008G084100 Sobic008G084100 Sobic010G018500--Sobic008G084100 Sobic002G153000 Sobic002G153000 Sobic010G018500--Sobic002G153000 Sobic002G101300 Sobic002G101300 Sobic010G018500--Sobic002G101300 Sobic010G042600 Sobic010G042600 Sobic010G018500--Sobic010G042600 Sobic010G018500--Sobic004G356300 Sobic001G106300 Sobic001G106300 Sobic001G443300--Sobic001G106300 Sobic008G164375 Sobic008G164375 Sobic001G443300--Sobic008G164375 Sobic002G057050 Sobic002G057050 Sobic001G443300--Sobic002G057050 Sobic010G215400 Sobic010G215400 Sobic001G443300--Sobic010G215400 Sobic003G256300 Sobic003G256300 Sobic001G443300--Sobic003G256300 Sobic004G313700 Sobic004G313700 Sobic001G443300--Sobic004G313700 Sobic004G290400 Sobic004G290400 Sobic001G443300--Sobic004G290400 Sobic002G241700 Sobic002G241700 Sobic001G443300--Sobic002G241700 Sobic010G025100 Sobic010G025100 Sobic001G443300--Sobic010G025100 Sobic007G192500 Sobic007G192500 Sobic009G244900--Sobic007G192500 Sobic002G201700 Sobic002G201700 Sobic009G244900--Sobic002G201700 Sobic004G261800 Sobic004G261800 Sobic009G244900--Sobic004G261800 Sobic010G101600 Sobic010G101600 Sobic009G244900--Sobic010G101600 Sobic002G167100 Sobic002G167100 Sobic009G244900--Sobic002G167100 Sobic009G244900--Sobic002G153000 Sobic001G135200 Sobic001G135200 Sobic009G244900--Sobic001G135200 Sobic010G250300 Sobic010G250300 Sobic009G244900--Sobic010G250300 Sobic004G069400 Sobic004G069400 Sobic009G244900--Sobic004G069400 Sobic003G396800 Sobic003G396800 Sobic009G228600--Sobic003G396800 Sobic001G143900 Sobic001G143900 Sobic009G228600--Sobic001G143900 Sobic009G063800 Sobic009G063800 Sobic009G228600--Sobic009G063800 Sobic008G050700 Sobic008G050700 Sobic009G228600--Sobic008G050700 Sobic003G113400 Sobic003G113400 Sobic009G228600--Sobic003G113400 Sobic001G282200 Sobic001G282200 Sobic009G228600--Sobic001G282200 Sobic002G182000 Sobic002G182000 Sobic009G228600--Sobic002G182000 Sobic008G018300 Sobic008G018300 Sobic009G228600--Sobic008G018300 Sobic001G203600 Sobic001G203600 Sobic009G228600--Sobic001G203600 Sobic004G007700 Sobic004G007700 Sobic004G356300--Sobic004G007700 Sobic004G356300--Sobic001G011000 Sobic003G075200 Sobic003G075200 Sobic004G356300--Sobic003G075200 Sobic002G367800 Sobic002G367800 Sobic004G356300--Sobic002G367800 Sobic002G090500 Sobic002G090500 Sobic004G356300--Sobic002G090500 Sobic008G057900 Sobic008G057900 Sobic004G356300--Sobic008G057900 Sobic001G176900 Sobic001G176900 Sobic004G356300--Sobic001G176900 Sobic010G134100 Sobic010G134100 Sobic004G356300--Sobic010G134100 Sobic002G071100 Sobic002G071100 Sobic004G356300--Sobic002G071100
Octagon: transcription factors


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