Gene annotation
Transcriptome id Sobic.007G129300.1,Sobic.007G129300.2,Sobic.007G129300.3
Synonym Sb07g020530
Functional annotation expressed protein
UniProt C5YKZ2
Pfam -
Panther DB PTHR11439 PTHR11439:SF161
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G00980 : zinc knuckle (CCHC-type) family protein
RAP-DB (Rice) LOC_Os08g32560.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G230300 shugoshin-1, putative, expressed -
2 Sobic.003G387700 expressed protein -
3 Sobic.009G120700 microtubule-binding protein TANGLED1, putative, expressed K18636: microtubule-binding protein TANGLED1
4 Sobic.004G070900 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.007G017700 IQ calmodulin-binding motif domain containing protein, expressed -
6 Sobic.001G091500 expressed protein -
7 Sobic.002G128000 receptor protein kinase, putative, expressed -
8 Sobic.002G343600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 23108465)@polygalacturonase inhibitor 1 precursor, putative, expressed -
9 Sobic.006G031900 expansin precursor, putative, expressed -
10 Sobic.002G289800 HMG1/2, putative, expressed -
11 Sobic.007G100600 plastocyanin-like domain containing protein, putative, expressed -
12 Sobic.003G316601 - -
13 Sobic.001G160100 IQ calmodulin-binding motif family protein, putative, expressed -
14 Sobic.006G081800 histone H3, putative, expressed K11253: histone H3
15 Sobic.001G289900 AT hook motif domain containing protein, expressed -
16 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
17 Sobic.006G065400 expressed protein -
18 Sobic.003G328500 Expressed in younger stem(PubMedID : 28649278)@cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
19 Sobic.009G033800 IF, putative, expressed -
20 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1


Gene co-expression network
sample Sobic007G129300 Sobic007G129300 Sobic001G230300 Sobic001G230300 Sobic007G129300--Sobic001G230300 Sobic003G387700 Sobic003G387700 Sobic007G129300--Sobic003G387700 Sobic009G120700 Sobic009G120700 Sobic007G129300--Sobic009G120700 Sobic004G070900 Sobic004G070900 Sobic007G129300--Sobic004G070900 Sobic007G017700 Sobic007G017700 Sobic007G129300--Sobic007G017700 Sobic001G091500 Sobic001G091500 Sobic007G129300--Sobic001G091500 Sobic002G128000 Sobic002G128000 Sobic007G129300--Sobic002G128000 Sobic002G343600 Sobic002G343600 Sobic007G129300--Sobic002G343600 Sobic006G031900 Sobic006G031900 Sobic007G129300--Sobic006G031900 Sobic001G230300--Sobic001G091500 Sobic001G230300--Sobic003G387700 Sobic008G114900 Sobic008G114900 Sobic001G230300--Sobic008G114900 Sobic003G102000 Sobic003G102000 Sobic001G230300--Sobic003G102000 Sobic004G339500 Sobic004G339500 Sobic001G230300--Sobic004G339500 Sobic010G119300 Sobic010G119300 Sobic001G230300--Sobic010G119300 Sobic003G260700 Sobic003G260700 Sobic001G230300--Sobic003G260700 Sobic008G125700 Sobic008G125700 Sobic001G230300--Sobic008G125700 Sobic002G222500 Sobic002G222500 Sobic001G230300--Sobic002G222500 Sobic004G257600 Sobic004G257600 Sobic003G387700--Sobic004G257600 Sobic006G134200 Sobic006G134200 Sobic003G387700--Sobic006G134200 Sobic010G105400 Sobic010G105400 Sobic003G387700--Sobic010G105400 Sobic003G387700--Sobic001G091500 Sobic001G105800 Sobic001G105800 Sobic003G387700--Sobic001G105800 Sobic003G387700--Sobic010G119300 Sobic001G398400 Sobic001G398400 Sobic003G387700--Sobic001G398400 Sobic003G328500 Sobic003G328500 Sobic003G387700--Sobic003G328500 Sobic007G100600 Sobic007G100600 Sobic003G387700--Sobic007G100600 Sobic009G120700--Sobic001G091500 Sobic009G120700--Sobic010G119300 Sobic009G120700--Sobic003G102000 Sobic009G120700--Sobic003G328500 Sobic009G120700--Sobic003G387700 Sobic002G426800 Sobic002G426800 Sobic009G120700--Sobic002G426800 Sobic009G120700--Sobic007G100600 Sobic009G120700--Sobic001G230300 Sobic007G132900 Sobic007G132900 Sobic009G120700--Sobic007G132900 Sobic004G070900--Sobic007G017700 Sobic001G157700 Sobic001G157700 Sobic004G070900--Sobic001G157700 Sobic004G070900--Sobic007G129300 Sobic002G289800 Sobic002G289800 Sobic004G070900--Sobic002G289800 Sobic004G070900--Sobic002G343600 Sobic004G070900--Sobic009G120700 Sobic010G202100 Sobic010G202100 Sobic004G070900--Sobic010G202100 Sobic001G300400 Sobic001G300400 Sobic004G070900--Sobic001G300400 Sobic006G081800 Sobic006G081800 Sobic004G070900--Sobic006G081800 Sobic007G017700--Sobic003G387700 Sobic007G017700--Sobic002G289800 Sobic007G207700 Sobic007G207700 Sobic007G017700--Sobic007G207700 Sobic007G017700--Sobic010G202100 Sobic007G017700--Sobic006G134200 Sobic010G215300 Sobic010G215300 Sobic007G017700--Sobic010G215300 Sobic007G017700--Sobic001G091500 Sobic010G234800 Sobic010G234800 Sobic007G017700--Sobic010G234800 Sobic008G114500 Sobic008G114500 Sobic007G017700--Sobic008G114500 Sobic001G091500--Sobic002G426800 Sobic001G091500--Sobic003G387700 Sobic001G091500--Sobic009G120700 Sobic001G091500--Sobic003G260700 Sobic004G047100 Sobic004G047100 Sobic001G091500--Sobic004G047100 Sobic001G091500--Sobic002G222500 Sobic001G091500--Sobic004G339500 Sobic001G091500--Sobic010G119300 Sobic004G198100 Sobic004G198100 Sobic001G091500--Sobic004G198100 Sobic003G085900 Sobic003G085900 Sobic002G128000--Sobic003G085900 Sobic010G092400 Sobic010G092400 Sobic002G128000--Sobic010G092400 Sobic002G237000 Sobic002G237000 Sobic002G128000--Sobic002G237000 Sobic004G327600 Sobic004G327600 Sobic002G128000--Sobic004G327600 Sobic004G075900 Sobic004G075900 Sobic002G128000--Sobic004G075900 Sobic002G128000--Sobic001G105800 Sobic004G229200 Sobic004G229200 Sobic002G128000--Sobic004G229200 Sobic002G128000--Sobic002G289800 Sobic002G178800 Sobic002G178800 Sobic002G128000--Sobic002G178800 Sobic006G076000 Sobic006G076000 Sobic002G343600--Sobic006G076000 Sobic004G086500 Sobic004G086500 Sobic002G343600--Sobic004G086500 Sobic004G277700 Sobic004G277700 Sobic002G343600--Sobic004G277700 Sobic002G343600--Sobic006G031900 Sobic009G059800 Sobic009G059800 Sobic002G343600--Sobic009G059800 Sobic010G048600 Sobic010G048600 Sobic002G343600--Sobic010G048600 Sobic001G456000 Sobic001G456000 Sobic002G343600--Sobic001G456000 Sobic007G218400 Sobic007G218400 Sobic002G343600--Sobic007G218400 Sobic009G059932 Sobic009G059932 Sobic002G343600--Sobic009G059932 Sobic006G031900--Sobic002G343600 Sobic006G031900--Sobic004G086500 Sobic006G031900--Sobic004G277700 Sobic006G031900--Sobic001G157700 Sobic006G031900--Sobic002G178800 Sobic006G031900--Sobic010G048600 Sobic005G070700 Sobic005G070700 Sobic006G031900--Sobic005G070700 Sobic001G274300 Sobic001G274300 Sobic006G031900--Sobic001G274300 Sobic001G459300 Sobic001G459300 Sobic006G031900--Sobic001G459300
Octagon: transcription factors


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