Gene annotation
Transcriptome id Sobic.008G171700.1
Synonym ATORC3, ORC3, Sb08g021650
Functional annotation ORC3 - Putative origin recognition complex subunit 3, expressed
UniProt C5YS23
Pfam PF07034
Panther DB PTHR12748 PTHR12748:SF0
NCBI CDD KOG2538; Origin recognition complex, subunit 3
KEGG Orthology K02605; origin recognition complex subunit 3
Gene Ontology GO:0006260; DNA replication GO:0005664nuclear origin of replication recognition complex GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G16690 : origin recognition complex subunit 3
RAP-DB (Rice) LOC_Os10g26280.1 : ORC3 - Putative origin recognition complex subunit 3, expressed
MaizeGDB (Corn) Zm00025a004705
Brachypodium KQJ89034
Barley HORVU2Hr1G029330.6 , HORVU2Hr1G029330.5 , HORVU2Hr1G029330.4 , HORVU2Hr1G029330.3 , HORVU2Hr1G029330.2 , HORVU2Hr1G029330.1 , HORVU2Hr1G029330.9 , HORVU2Hr1G029330.8 , HORVU2Hr1G029330.19 , HORVU2Hr1G029330.18 , HORVU2Hr1G029330.17 , HORVU2Hr1G029330.16 , HORVU2Hr1G029330.15 , HORVU2Hr1G029330.14 , HORVU2Hr1G029330.13 , HORVU2Hr1G029330.12 , HORVU2Hr1G029330.11 , HORVU2Hr1G029330.10 , HORVU2Hr1G029330.26 , HORVU2Hr1G029330.27 , HORVU2Hr1G029330.24 , HORVU2Hr1G029330.25 , HORVU2Hr1G029330.22 , HORVU2Hr1G029330.23 , HORVU2Hr1G029330.20 , HORVU2Hr1G029330.21 , HORVU2Hr1G029330.28
Wheat TraesCS7B02G120800 , TraesCS7A02G213600 , TraesCS7D02G215600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G254800 DNA topoisomerase 3 protein, putative, expressed K03165: DNA topoisomerase III
2 Sobic.003G161800 exportin 1, putative, expressed K14289: exportin-5
3 Sobic.002G132600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- K14314: NUP210, nuclear pore complex protein Nup210
4 Sobic.001G373000 nucleoporin interacting component, putative, expressed K14309: NUP93, nuclear pore complex protein Nup93
5 Sobic.002G155100 bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor, putative, expressed K12524: bifunctional aspartokinase / homoserine dehydrogenase 1
6 Sobic.006G015500 ZOS9-03 - C2H2 zinc finger protein, expressed -
7 Sobic.003G432300 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein K14794: ribosomal RNA-processing protein 12
8 Sobic.001G423300 outer membrane protein, OMP85 family, putative, expressed -
9 Sobic.005G030100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2-isopropylmalate synthase B, putative, expressed K01649: leuA, 2-isopropylmalate synthase
10 Sobic.007G011800 - K13095: splicing factor 1
11 Sobic.002G126800 tetratricopeptide repeat domain containing protein, expressed -
12 Sobic.009G113100 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
13 Sobic.005G028100 nucleolar complex protein 2, putative, expressed K14833: nucleolar complex protein 2
14 Sobic.009G257500 expressed protein -
15 Sobic.006G207300 DNA ligase I, ATP-dependent family protein, expressed K10777: LIG4, DNA ligase 4
16 Sobic.009G032200 DNA methyltransferase protein, putative, expressed -
17 Sobic.003G298900 1,3-beta-glucan synthase component, putative, expressed K11000: callose synthase
18 Sobic.008G164700 - -
19 Sobic.001G222000 WD domain, G-beta repeat domain containing protein, expressed -
20 Sobic.001G106300 fanconi anemia L, putative, expressed K10606: FANCL, E3 ubiquitin-protein ligase FANCL


Gene co-expression network
sample Sobic008G171700 Sobic008G171700 Sobic002G254800 Sobic002G254800 Sobic008G171700--Sobic002G254800 Sobic003G161800 Sobic003G161800 Sobic008G171700--Sobic003G161800 Sobic002G132600 Sobic002G132600 Sobic008G171700--Sobic002G132600 Sobic001G373000 Sobic001G373000 Sobic008G171700--Sobic001G373000 Sobic002G155100 Sobic002G155100 Sobic008G171700--Sobic002G155100 Sobic006G015500 Sobic006G015500 Sobic008G171700--Sobic006G015500 Sobic003G432300 Sobic003G432300 Sobic008G171700--Sobic003G432300 Sobic001G423300 Sobic001G423300 Sobic008G171700--Sobic001G423300 Sobic005G030100 Sobic005G030100 Sobic008G171700--Sobic005G030100 Sobic002G254800--Sobic003G161800 Sobic002G254800--Sobic002G132600 Sobic002G254800--Sobic001G373000 Sobic010G236200 Sobic010G236200 Sobic002G254800--Sobic010G236200 Sobic003G259600 Sobic003G259600 Sobic002G254800--Sobic003G259600 Sobic001G373800 Sobic001G373800 Sobic002G254800--Sobic001G373800 Sobic006G033101 Sobic006G033101 Sobic002G254800--Sobic006G033101 Sobic004G038100 Sobic004G038100 Sobic002G254800--Sobic004G038100 Sobic009G032200 Sobic009G032200 Sobic002G254800--Sobic009G032200 Sobic003G161800--Sobic002G254800 Sobic003G161800--Sobic001G373000 Sobic009G030400 Sobic009G030400 Sobic003G161800--Sobic009G030400 Sobic006G179400 Sobic006G179400 Sobic003G161800--Sobic006G179400 Sobic003G180100 Sobic003G180100 Sobic003G161800--Sobic003G180100 Sobic003G161800--Sobic010G236200 Sobic003G161800--Sobic005G030100 Sobic009G113100 Sobic009G113100 Sobic003G161800--Sobic009G113100 Sobic001G115500 Sobic001G115500 Sobic003G161800--Sobic001G115500 Sobic009G104900 Sobic009G104900 Sobic002G132600--Sobic009G104900 Sobic002G132600--Sobic003G432300 Sobic005G028100 Sobic005G028100 Sobic002G132600--Sobic005G028100 Sobic002G132600--Sobic001G373000 Sobic002G126800 Sobic002G126800 Sobic002G132600--Sobic002G126800 Sobic002G132600--Sobic004G038100 Sobic006G059500 Sobic006G059500 Sobic002G132600--Sobic006G059500 Sobic002G132600--Sobic002G254800 Sobic010G250800 Sobic010G250800 Sobic002G132600--Sobic010G250800 Sobic001G373000--Sobic009G104900 Sobic001G373000--Sobic004G038100 Sobic002G005000 Sobic002G005000 Sobic001G373000--Sobic002G005000 Sobic001G373000--Sobic003G259600 Sobic003G361400 Sobic003G361400 Sobic001G373000--Sobic003G361400 Sobic010G188000 Sobic010G188000 Sobic001G373000--Sobic010G188000 Sobic001G373000--Sobic002G126800 Sobic001G013300 Sobic001G013300 Sobic001G373000--Sobic001G013300 Sobic001G373000--Sobic005G028100 Sobic006G193500 Sobic006G193500 Sobic002G155100--Sobic006G193500 Sobic002G155100--Sobic002G126800 Sobic002G155100--Sobic003G432300 Sobic006G237000 Sobic006G237000 Sobic002G155100--Sobic006G237000 Sobic003G102700 Sobic003G102700 Sobic002G155100--Sobic003G102700 Sobic002G155100--Sobic005G028100 Sobic002G155100--Sobic001G373000 Sobic001G199500 Sobic001G199500 Sobic002G155100--Sobic001G199500 Sobic002G155100--Sobic001G013300 Sobic006G061100 Sobic006G061100 Sobic006G015500--Sobic006G061100 Sobic004G075700 Sobic004G075700 Sobic006G015500--Sobic004G075700 Sobic008G164700 Sobic008G164700 Sobic006G015500--Sobic008G164700 Sobic006G015500--Sobic006G179400 Sobic001G278700 Sobic001G278700 Sobic006G015500--Sobic001G278700 Sobic009G132600 Sobic009G132600 Sobic006G015500--Sobic009G132600 Sobic009G060300 Sobic009G060300 Sobic006G015500--Sobic009G060300 Sobic006G015500--Sobic009G113100 Sobic006G257600 Sobic006G257600 Sobic006G015500--Sobic006G257600 Sobic003G432300--Sobic002G126800 Sobic003G432300--Sobic005G028100 Sobic005G088900 Sobic005G088900 Sobic003G432300--Sobic005G088900 Sobic003G432300--Sobic002G132600 Sobic003G432300--Sobic001G373000 Sobic003G144000 Sobic003G144000 Sobic003G432300--Sobic003G144000 Sobic008G000600 Sobic008G000600 Sobic003G432300--Sobic008G000600 Sobic002G043000 Sobic002G043000 Sobic003G432300--Sobic002G043000 Sobic003G432300--Sobic004G038100 Sobic005G187400 Sobic005G187400 Sobic001G423300--Sobic005G187400 Sobic001G423300--Sobic009G113100 Sobic001G462401 Sobic001G462401 Sobic001G423300--Sobic001G462401 Sobic009G254000 Sobic009G254000 Sobic001G423300--Sobic009G254000 Sobic010G207400 Sobic010G207400 Sobic001G423300--Sobic010G207400 Sobic004G155800 Sobic004G155800 Sobic001G423300--Sobic004G155800 Sobic008G179800 Sobic008G179800 Sobic001G423300--Sobic008G179800 Sobic001G423300--Sobic006G061100 Sobic001G423300--Sobic004G075700 Sobic005G030100--Sobic009G030400 Sobic002G390400 Sobic002G390400 Sobic005G030100--Sobic002G390400 Sobic005G030100--Sobic010G207400 Sobic007G150700 Sobic007G150700 Sobic005G030100--Sobic007G150700 Sobic005G030100--Sobic003G161800 Sobic008G052200 Sobic008G052200 Sobic005G030100--Sobic008G052200 Sobic005G030100--Sobic006G061100 Sobic005G030100--Sobic001G423300 Sobic008G160500 Sobic008G160500 Sobic005G030100--Sobic008G160500
Octagon: transcription factors


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