Gene annotation
Transcriptome id Sobic.009G066500.1,Sobic.009G066500.2
Synonym Sb09g005550
Functional annotation DUF581 domain containing protein, expressed
UniProt C5Z187
Pfam PF04570
Panther DB PTHR33059 PTHR33059:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11460 : Protein of unknown function (DUF581)
RAP-DB (Rice) LOC_Os05g08800.1 : DUF581 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a043112
Brachypodium KQK03033 , KQK07205 , PNT70080
Barley HORVU1Hr1G026780.1 , HORVU1Hr1G026780.2 , HORVU1Hr1G026780.3 , HORVU1Hr1G026780.4 , HORVU1Hr1G026780.5 , HORVU3Hr1G021650.1 , HORVU3Hr1G021650.2
Wheat TraesCS1A02G119800 , TraesCS3D02G119500 , TraesCS3A02G117700 , TraesCS3B02G137000 , TraesCS1D02G120700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G329000 OsSCP10 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
2 Sobic.005G131900 inducer of CBF expression 1, putative, expressed -
3 Sobic.002G035500 CIN-like (ClassII) Subclade 13 TCP(PubMedID : 21444336)@basic helix-loop-helix (bHLH) transcription factor(PubMedID : 23915383)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
4 Sobic.009G163700 fasciclin-like arabinogalactan protein, putative, expressed -
5 Sobic.002G394200 expressed protein K15711: SMARCA3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3
6 Sobic.002G340350 - -
7 Sobic.006G147900 expressed protein -
8 Sobic.007G162000 carboxyl-terminal peptidase, putative, expressed -
9 Sobic.009G257900 expressed protein -
10 Sobic.001G470200 membrane associated DUF588 domain containing protein, putative, expressed -
11 Sobic.006G122300 glycosyl hydrolase family 5 protein, putative, expressed -
12 Sobic.002G286100 DUF292 domain containing protein, expressed -
13 Sobic.004G113900 polygalacturonase, putative, expressed -
14 Sobic.001G452900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
15 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
16 Sobic.006G245200 OsFBX239 - F-box domain containing protein, expressed -
17 Sobic.003G083500 inactive receptor kinase At2g26730 precursor, putative, expressed -
18 Sobic.001G247000 MBTB51 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
19 Sobic.010G275800 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
20 Sobic.003G320300 ZOS1-12 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic009G066500 Sobic009G066500 Sobic004G329000 Sobic004G329000 Sobic009G066500--Sobic004G329000 Sobic005G131900 Sobic005G131900 Sobic009G066500--Sobic005G131900 Sobic002G035500 Sobic002G035500 Sobic009G066500--Sobic002G035500 Sobic009G163700 Sobic009G163700 Sobic009G066500--Sobic009G163700 Sobic002G394200 Sobic002G394200 Sobic009G066500--Sobic002G394200 Sobic002G340350 Sobic002G340350 Sobic009G066500--Sobic002G340350 Sobic006G147900 Sobic006G147900 Sobic009G066500--Sobic006G147900 Sobic007G162000 Sobic007G162000 Sobic009G066500--Sobic007G162000 Sobic009G257900 Sobic009G257900 Sobic009G066500--Sobic009G257900 Sobic004G329000--Sobic009G257900 Sobic003G351900 Sobic003G351900 Sobic004G329000--Sobic003G351900 Sobic004G113900 Sobic004G113900 Sobic004G329000--Sobic004G113900 Sobic003G251700 Sobic003G251700 Sobic004G329000--Sobic003G251700 Sobic006G142500 Sobic006G142500 Sobic004G329000--Sobic006G142500 Sobic004G164700 Sobic004G164700 Sobic004G329000--Sobic004G164700 Sobic008G190000 Sobic008G190000 Sobic004G329000--Sobic008G190000 Sobic006G050900 Sobic006G050900 Sobic004G329000--Sobic006G050900 Sobic001G452900 Sobic001G452900 Sobic004G329000--Sobic001G452900 Sobic005G131900--Sobic002G340350 Sobic005G131900--Sobic002G035500 Sobic005G131900--Sobic004G113900 Sobic003G325400 Sobic003G325400 Sobic005G131900--Sobic003G325400 Sobic009G203200 Sobic009G203200 Sobic005G131900--Sobic009G203200 Sobic004G059100 Sobic004G059100 Sobic005G131900--Sobic004G059100 Sobic001G470200 Sobic001G470200 Sobic005G131900--Sobic001G470200 Sobic005G131900--Sobic004G329000 Sobic007G019600 Sobic007G019600 Sobic005G131900--Sobic007G019600 Sobic002G035500--Sobic007G019600 Sobic005G129600 Sobic005G129600 Sobic002G035500--Sobic005G129600 Sobic002G035500--Sobic004G113900 Sobic010G209800 Sobic010G209800 Sobic002G035500--Sobic010G209800 Sobic004G191600 Sobic004G191600 Sobic002G035500--Sobic004G191600 Sobic003G282600 Sobic003G282600 Sobic002G035500--Sobic003G282600 Sobic002G035500--Sobic009G257900 Sobic004G237300 Sobic004G237300 Sobic002G035500--Sobic004G237300 Sobic002G035500--Sobic007G162000 Sobic001G494300 Sobic001G494300 Sobic009G163700--Sobic001G494300 Sobic009G163700--Sobic002G394200 Sobic009G163700--Sobic002G035500 Sobic006G155900 Sobic006G155900 Sobic009G163700--Sobic006G155900 Sobic003G040100 Sobic003G040100 Sobic009G163700--Sobic003G040100 Sobic009G163700--Sobic009G257900 Sobic007G153300 Sobic007G153300 Sobic009G163700--Sobic007G153300 Sobic009G163700--Sobic007G162000 Sobic009G163700--Sobic007G019600 Sobic009G025400 Sobic009G025400 Sobic002G394200--Sobic009G025400 Sobic004G108400 Sobic004G108400 Sobic002G394200--Sobic004G108400 Sobic002G420000 Sobic002G420000 Sobic002G394200--Sobic002G420000 Sobic007G008300 Sobic007G008300 Sobic002G394200--Sobic007G008300 Sobic002G394200--Sobic009G257900 Sobic001G295400 Sobic001G295400 Sobic002G394200--Sobic001G295400 Sobic002G394200--Sobic001G494300 Sobic006G112800 Sobic006G112800 Sobic002G394200--Sobic006G112800 Sobic005G056800 Sobic005G056800 Sobic002G394200--Sobic005G056800 Sobic006G163650 Sobic006G163650 Sobic002G340350--Sobic006G163650 Sobic001G247000 Sobic001G247000 Sobic002G340350--Sobic001G247000 Sobic003G284500 Sobic003G284500 Sobic002G340350--Sobic003G284500 Sobic002G340350--Sobic005G131900 Sobic009G254400 Sobic009G254400 Sobic002G340350--Sobic009G254400 Sobic006G245200 Sobic006G245200 Sobic002G340350--Sobic006G245200 Sobic010G014900 Sobic010G014900 Sobic002G340350--Sobic010G014900 Sobic002G340350--Sobic007G153300 Sobic007G158400 Sobic007G158400 Sobic002G340350--Sobic007G158400 Sobic006G147900--Sobic004G108400 Sobic002G221400 Sobic002G221400 Sobic006G147900--Sobic002G221400 Sobic004G266800 Sobic004G266800 Sobic006G147900--Sobic004G266800 Sobic004G313900 Sobic004G313900 Sobic006G147900--Sobic004G313900 Sobic006G147900--Sobic004G329000 Sobic006G147900--Sobic003G251700 Sobic002G286100 Sobic002G286100 Sobic006G147900--Sobic002G286100 Sobic006G147900--Sobic009G257900 Sobic006G163600 Sobic006G163600 Sobic006G147900--Sobic006G163600 Sobic002G202500 Sobic002G202500 Sobic007G162000--Sobic002G202500 Sobic009G195600 Sobic009G195600 Sobic007G162000--Sobic009G195600 Sobic007G162000--Sobic007G019600 Sobic003G047200 Sobic003G047200 Sobic007G162000--Sobic003G047200 Sobic001G331100 Sobic001G331100 Sobic007G162000--Sobic001G331100 Sobic007G162000--Sobic002G035500 Sobic001G253900 Sobic001G253900 Sobic007G162000--Sobic001G253900 Sobic007G162000--Sobic006G155900 Sobic003G432000 Sobic003G432000 Sobic007G162000--Sobic003G432000 Sobic004G317200 Sobic004G317200 Sobic009G257900--Sobic004G317200 Sobic009G257900--Sobic004G108400 Sobic009G257900--Sobic009G025400 Sobic009G257900--Sobic005G129600 Sobic009G257900--Sobic004G313900 Sobic009G257900--Sobic004G329000 Sobic001G390400 Sobic001G390400 Sobic009G257900--Sobic001G390400 Sobic004G357000 Sobic004G357000 Sobic009G257900--Sobic004G357000 Sobic009G257900--Sobic004G113900
Octagon: transcription factors


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