Gene annotation
Transcriptome id Sobic.009G120301.1,Sobic.009G120301.3,Sobic.009G120301.7,Sobic.009G120301.4,Sobic.009G120301.8,Sobic.009G120301.2,Sobic.009G120301.5,Sobic.009G120301.9,Sobic.009G120301.10,Sobic.009G120301.6
Synonym -
Functional annotation -
UniProt A0A1Z5R3E6 , A0A1Z5R380 , A0A1Z5R2D8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G474600 calmodulin-binding transcription activator, putative, expressed -
2 Sobic.006G237400 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
3 Sobic.001G260400 transcription initiation factor, putative, expressed K03136: TFIIE1, GTF2E1, TFA1, transcription initiation factor TFIIE subunit alpha
4 Sobic.001G125200 HEAT repeat family protein, putative, expressed -
5 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
6 Sobic.010G101800 dynamin, putative, expressed K01528: dynamin 1/3
7 Sobic.004G065100 RNA recognition motif, putative, expressed K12842: U2-associated protein SR140
8 Sobic.003G280800 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
9 Sobic.004G208900 RNA-binding protein Luc7-like, putative, expressed -
10 Sobic.003G372700 expressed protein -
11 Sobic.003G029700 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
12 Sobic.K042000 non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
13 Sobic.009G191000 MATH domain containing protein, expressed -
14 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
15 Sobic.004G274200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
16 Sobic.002G310200 expressed protein -
17 Sobic.001G363500 DIRP family protein, putative, expressed -
18 Sobic.005G032800 splicing factor, putative, expressed K13109: IK, RED, IK cytokine
19 Sobic.002G006900 tetratricopeptide repeat domain containing protein, expressed -
20 Sobic.007G126600 RNA recognition motif containing protein, putative, expressed K12822: RBM25, RNA-binding protein 25


Gene co-expression network
sample Sobic009G120301 Sobic009G120301 Sobic001G474600 Sobic001G474600 Sobic009G120301--Sobic001G474600 Sobic006G237400 Sobic006G237400 Sobic009G120301--Sobic006G237400 Sobic001G260400 Sobic001G260400 Sobic009G120301--Sobic001G260400 Sobic001G125200 Sobic001G125200 Sobic009G120301--Sobic001G125200 Sobic008G047800 Sobic008G047800 Sobic009G120301--Sobic008G047800 Sobic010G101800 Sobic010G101800 Sobic009G120301--Sobic010G101800 Sobic004G065100 Sobic004G065100 Sobic009G120301--Sobic004G065100 Sobic003G280800 Sobic003G280800 Sobic009G120301--Sobic003G280800 Sobic004G208900 Sobic004G208900 Sobic009G120301--Sobic004G208900 Sobic001G474600--Sobic003G280800 Sobic009G166300 Sobic009G166300 Sobic001G474600--Sobic009G166300 Sobic001G474600--Sobic001G125200 Sobic003G372700 Sobic003G372700 Sobic001G474600--Sobic003G372700 Sobic007G217000 Sobic007G217000 Sobic001G474600--Sobic007G217000 Sobic007G096000 Sobic007G096000 Sobic001G474600--Sobic007G096000 Sobic007G207000 Sobic007G207000 Sobic001G474600--Sobic007G207000 Sobic009G191000 Sobic009G191000 Sobic001G474600--Sobic009G191000 Sobic001G241200 Sobic001G241200 Sobic001G474600--Sobic001G241200 Sobic001G497300 Sobic001G497300 Sobic006G237400--Sobic001G497300 Sobic006G237400--Sobic008G047800 Sobic003G029700 Sobic003G029700 Sobic006G237400--Sobic003G029700 Sobic009G249200 Sobic009G249200 Sobic006G237400--Sobic009G249200 Sobic006G237400--Sobic007G217000 Sobic001G253700 Sobic001G253700 Sobic006G237400--Sobic001G253700 Sobic002G310200 Sobic002G310200 Sobic006G237400--Sobic002G310200 Sobic006G237400--Sobic001G474600 Sobic001G220300 Sobic001G220300 Sobic006G237400--Sobic001G220300 Sobic005G027400 Sobic005G027400 Sobic001G260400--Sobic005G027400 Sobic003G139900 Sobic003G139900 Sobic001G260400--Sobic003G139900 Sobic010G079900 Sobic010G079900 Sobic001G260400--Sobic010G079900 Sobic001G441400 Sobic001G441400 Sobic001G260400--Sobic001G441400 Sobic001G260400--Sobic004G065100 Sobic004G274200 Sobic004G274200 Sobic001G260400--Sobic004G274200 Sobic001G260400--Sobic001G220300 Sobic001G260400--Sobic008G047800 Sobic002G134200 Sobic002G134200 Sobic001G260400--Sobic002G134200 Sobic001G125200--Sobic001G474600 Sobic003G056100 Sobic003G056100 Sobic001G125200--Sobic003G056100 Sobic001G125200--Sobic007G207000 Sobic010G069100 Sobic010G069100 Sobic001G125200--Sobic010G069100 Sobic009G026500 Sobic009G026500 Sobic001G125200--Sobic009G026500 Sobic001G125200--Sobic009G166300 Sobic001G409600 Sobic001G409600 Sobic001G125200--Sobic001G409600 Sobic002G006900 Sobic002G006900 Sobic001G125200--Sobic002G006900 Sobic001G125200--Sobic007G217000 Sobic008G047800--Sobic002G006900 Sobic004G084300 Sobic004G084300 Sobic008G047800--Sobic004G084300 Sobic001G512700 Sobic001G512700 Sobic008G047800--Sobic001G512700 Sobic001G155000 Sobic001G155000 Sobic008G047800--Sobic001G155000 Sobic009G040600 Sobic009G040600 Sobic008G047800--Sobic009G040600 Sobic007G011300 Sobic007G011300 Sobic008G047800--Sobic007G011300 Sobic008G047800--Sobic007G217000 Sobic008G047800--Sobic004G274200 Sobic002G309600 Sobic002G309600 Sobic008G047800--Sobic002G309600 Sobic002G297200 Sobic002G297200 Sobic010G101800--Sobic002G297200 Sobic010G101800--Sobic001G155000 Sobic007G167500 Sobic007G167500 Sobic010G101800--Sobic007G167500 Sobic010G028800 Sobic010G028800 Sobic010G101800--Sobic010G028800 Sobic003G397800 Sobic003G397800 Sobic010G101800--Sobic003G397800 Sobic010G101800--Sobic001G409600 Sobic010G101800--Sobic002G310200 Sobic010G053800 Sobic010G053800 Sobic010G101800--Sobic010G053800 Sobic010G101800--Sobic002G309600 Sobic004G065100--Sobic001G241200 Sobic004G065100--Sobic002G309600 Sobic007G117400 Sobic007G117400 Sobic004G065100--Sobic007G117400 Sobic003G119000 Sobic003G119000 Sobic004G065100--Sobic003G119000 Sobic004G065100--Sobic005G027400 Sobic001G154900 Sobic001G154900 Sobic004G065100--Sobic001G154900 Sobic005G008800 Sobic005G008800 Sobic004G065100--Sobic005G008800 Sobic005G104500 Sobic005G104500 Sobic004G065100--Sobic005G104500 Sobic005G112300 Sobic005G112300 Sobic004G065100--Sobic005G112300 Sobic003G280800--Sobic002G309600 Sobic001G071400 Sobic001G071400 Sobic003G280800--Sobic001G071400 Sobic003G280800--Sobic002G134200 Sobic006G209850 Sobic006G209850 Sobic003G280800--Sobic006G209850 Sobic003G280800--Sobic003G119000 Sobic003G280800--Sobic001G474600 Sobic003G280800--Sobic007G117400 Sobic006G216800 Sobic006G216800 Sobic003G280800--Sobic006G216800 Sobic003G280800--Sobic003G372700 Sobic004G208900--Sobic009G040600 Sobic010G277500 Sobic010G277500 Sobic004G208900--Sobic010G277500 Sobic003G052200 Sobic003G052200 Sobic004G208900--Sobic003G052200 Sobic010G139000 Sobic010G139000 Sobic004G208900--Sobic010G139000 Sobic008G113100 Sobic008G113100 Sobic004G208900--Sobic008G113100 Sobic004G208900--Sobic002G006900 Sobic008G028700 Sobic008G028700 Sobic004G208900--Sobic008G028700 Sobic004G208900--Sobic003G280800 Sobic009G126400 Sobic009G126400 Sobic004G208900--Sobic009G126400
Octagon: transcription factors


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