Gene annotation
Transcriptome id Sobic.009G237500.1
Synonym Sb09g028980
Functional annotation expressed protein
UniProt C5YVZ2
Pfam PF11341
Panther DB PTHR35765 PTHR35765:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G52960 : -
RAP-DB (Rice) LOC_Os05g49410.1 : expressed protein
MaizeGDB (Corn) Zm00025a044630
Brachypodium KQK04789
Barley -
Wheat TraesCS1D02G417000 , TraesCS1B02G439700 , TraesCS1A02G409700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G310100 ABC transporter, ATP-binding protein, putative, expressed -
2 Sobic.002G156100 phosphoglycerate mutase, putative, expressed -
3 Sobic.001G281500 OsClp11 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
4 Sobic.001G424300 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K08081: tropinone reductase I
5 Sobic.001G445200 expressed protein -
6 Sobic.001G196200 CRS1/YhbY domain containing protein, expressed -
7 Sobic.001G437200 ATP-dependent Clp protease ATP-binding subunit, putative, expressed -
8 Sobic.002G424100 parvulin-type peptidyl prolyl cis/trans isomerase, putative, expressed -
9 Sobic.005G002900 OsGrx_S16 - glutaredoxin subgroup II, expressed -
10 Sobic.004G208600 glycine-rich protein, putative, expressed -
11 Sobic.003G225100 uroporphyrinogen decarboxylase, putative, expressed K01599: hemE, uroporphyrinogen decarboxylase
12 Sobic.010G153600 pentatricopeptide, putative, expressed -
13 Sobic.002G056800 YGGT family protein, putative, expressed -
14 Sobic.008G130900 ribosomal protein S6, putative, expressed -
15 Sobic.003G125400 Fe-S metabolism associated domain containing protein, expressed -
16 Sobic.001G489800 HNH endonuclease domain-containing protein, putative, expressed -
17 Sobic.004G255500 SET domain-containing protein, putative, expressed -
18 Sobic.001G448600 GTP-binding protein, putative, expressed K03978: GTP-binding protein
19 Sobic.008G067100 phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative, expressed K14153: hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase
20 Sobic.009G004800 - -


Gene co-expression network
sample Sobic009G237500 Sobic009G237500 Sobic003G310100 Sobic003G310100 Sobic009G237500--Sobic003G310100 Sobic002G156100 Sobic002G156100 Sobic009G237500--Sobic002G156100 Sobic001G281500 Sobic001G281500 Sobic009G237500--Sobic001G281500 Sobic001G424300 Sobic001G424300 Sobic009G237500--Sobic001G424300 Sobic001G445200 Sobic001G445200 Sobic009G237500--Sobic001G445200 Sobic001G196200 Sobic001G196200 Sobic009G237500--Sobic001G196200 Sobic001G437200 Sobic001G437200 Sobic009G237500--Sobic001G437200 Sobic002G424100 Sobic002G424100 Sobic009G237500--Sobic002G424100 Sobic005G002900 Sobic005G002900 Sobic009G237500--Sobic005G002900 Sobic003G310100--Sobic001G424300 Sobic002G056800 Sobic002G056800 Sobic003G310100--Sobic002G056800 Sobic003G310100--Sobic001G196200 Sobic001G489800 Sobic001G489800 Sobic003G310100--Sobic001G489800 Sobic003G310100--Sobic001G437200 Sobic003G310100--Sobic001G281500 Sobic006G237100 Sobic006G237100 Sobic003G310100--Sobic006G237100 Sobic003G310100--Sobic002G424100 Sobic006G111600 Sobic006G111600 Sobic003G310100--Sobic006G111600 Sobic003G162800 Sobic003G162800 Sobic002G156100--Sobic003G162800 Sobic001G375000 Sobic001G375000 Sobic002G156100--Sobic001G375000 Sobic003G128400 Sobic003G128400 Sobic002G156100--Sobic003G128400 Sobic001G382800 Sobic001G382800 Sobic002G156100--Sobic001G382800 Sobic003G045300 Sobic003G045300 Sobic002G156100--Sobic003G045300 Sobic010G255100 Sobic010G255100 Sobic002G156100--Sobic010G255100 Sobic008G067100 Sobic008G067100 Sobic002G156100--Sobic008G067100 Sobic005G014700 Sobic005G014700 Sobic002G156100--Sobic005G014700 Sobic002G156100--Sobic001G424300 Sobic001G281500--Sobic006G237100 Sobic007G116100 Sobic007G116100 Sobic001G281500--Sobic007G116100 Sobic006G107600 Sobic006G107600 Sobic001G281500--Sobic006G107600 Sobic001G099000 Sobic001G099000 Sobic001G281500--Sobic001G099000 Sobic001G281500--Sobic001G375000 Sobic007G171800 Sobic007G171800 Sobic001G281500--Sobic007G171800 Sobic006G263800 Sobic006G263800 Sobic001G281500--Sobic006G263800 Sobic010G027200 Sobic010G027200 Sobic001G281500--Sobic010G027200 Sobic005G184300 Sobic005G184300 Sobic001G281500--Sobic005G184300 Sobic001G424300--Sobic003G310100 Sobic001G424300--Sobic001G489800 Sobic001G424300--Sobic003G128400 Sobic009G131600 Sobic009G131600 Sobic001G424300--Sobic009G131600 Sobic001G424300--Sobic001G281500 Sobic001G424300--Sobic005G002900 Sobic006G055800 Sobic006G055800 Sobic001G424300--Sobic006G055800 Sobic001G424300--Sobic002G156100 Sobic001G424300--Sobic001G437200 Sobic001G445200--Sobic006G237100 Sobic005G009300 Sobic005G009300 Sobic001G445200--Sobic005G009300 Sobic001G445200--Sobic001G437200 Sobic001G445200--Sobic001G281500 Sobic002G404900 Sobic002G404900 Sobic001G445200--Sobic002G404900 Sobic001G445200--Sobic003G310100 Sobic001G445200--Sobic002G156100 Sobic002G409900 Sobic002G409900 Sobic001G445200--Sobic002G409900 Sobic001G445200--Sobic003G162800 Sobic001G196200--Sobic002G056800 Sobic002G131700 Sobic002G131700 Sobic001G196200--Sobic002G131700 Sobic003G254600 Sobic003G254600 Sobic001G196200--Sobic003G254600 Sobic001G196200--Sobic003G310100 Sobic001G196200--Sobic006G111600 Sobic001G196200--Sobic005G002900 Sobic009G028400 Sobic009G028400 Sobic001G196200--Sobic009G028400 Sobic004G179200 Sobic004G179200 Sobic001G196200--Sobic004G179200 Sobic001G196200--Sobic002G424100 Sobic003G298400 Sobic003G298400 Sobic001G437200--Sobic003G298400 Sobic001G437200--Sobic006G237100 Sobic001G437200--Sobic003G310100 Sobic001G437200--Sobic002G404900 Sobic001G437200--Sobic009G131600 Sobic001G437200--Sobic001G424300 Sobic001G437200--Sobic001G445200 Sobic003G286300 Sobic003G286300 Sobic001G437200--Sobic003G286300 Sobic001G161400 Sobic001G161400 Sobic001G437200--Sobic001G161400 Sobic003G085000 Sobic003G085000 Sobic002G424100--Sobic003G085000 Sobic002G424100--Sobic005G002900 Sobic002G424100--Sobic002G056800 Sobic002G424100--Sobic002G131700 Sobic002G424100--Sobic003G310100 Sobic002G424100--Sobic006G111600 Sobic001G531400 Sobic001G531400 Sobic002G424100--Sobic001G531400 Sobic002G424100--Sobic009G028400 Sobic001G291900 Sobic001G291900 Sobic002G424100--Sobic001G291900 Sobic001G083100 Sobic001G083100 Sobic005G002900--Sobic001G083100 Sobic005G002900--Sobic006G055800 Sobic009G148500 Sobic009G148500 Sobic005G002900--Sobic009G148500 Sobic001G469933 Sobic001G469933 Sobic005G002900--Sobic001G469933 Sobic005G002900--Sobic001G291900 Sobic006G106400 Sobic006G106400 Sobic005G002900--Sobic006G106400 Sobic003G432500 Sobic003G432500 Sobic005G002900--Sobic003G432500 Sobic003G232700 Sobic003G232700 Sobic005G002900--Sobic003G232700 Sobic005G002900--Sobic002G131700
Octagon: transcription factors


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