Gene annotation
Transcriptome id Sobic.010G201900.1
Synonym Sb10g024990
Functional annotation mTERF domain containing protein, expressed
UniProt C5Z6L5
Pfam PF02536
Panther DB PTHR13068 PTHR13068:SF34
NCBI CDD KOG1267; Mitochondrial transcription termination factor, mTERF
KEGG Orthology K15032; mTERF domain-containing protein, mitochondrial
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005739mitochondrion GO:0003690double-stranded DNA binding


Orthologs (automatic annotation)
TAIR AT5G07900 : Mitochondrial transcription termination factor family protein
RAP-DB (Rice) LOC_Os05g33460.2 : mTERF domain containing protein, expressed
MaizeGDB (Corn) Zm00025a037500
Brachypodium -
Barley HORVU1Hr1G061360.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G100000 pentatricopeptide, putative, expressed -
2 Sobic.006G215900 OsFBX172 - F-box domain containing protein, expressed -
3 Sobic.009G199500 ribosomal protein L27, putative, expressed K02899: RP-L27, MRPL27, large subunit ribosomal protein L27
4 Sobic.002G299100 SET domain containing protein, expressed -
5 Sobic.009G194801 - -
6 Sobic.004G316800 RPA1A - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
7 Sobic.001G176200 FHA domain containing protein, putative, expressed K13216: PPP1R8, nuclear inhibitor of protein phosphatase 1
8 Sobic.009G015800 expressed protein -
9 Sobic.005G154500 OsFBX407 - F-box domain containing protein, expressed -
10 Sobic.007G115900 SAM domain family protein, expressed -
11 Sobic.001G295500 expressed protein -
12 Sobic.001G537800 SNF7 domain containing protein, putative, expressed K12193: VPS24, charged multivesicular body protein 3
13 Sobic.009G102000 OsFBX9 - F-box domain containing protein, expressed -
14 Sobic.003G143200 expressed protein -
15 Sobic.001G424600 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
16 Sobic.005G015900 dnaJ domain containing protein, expressed -
17 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
18 Sobic.006G082900 expressed protein -
19 Sobic.008G152900 MATH domain containing protein, expressed -
20 Sobic.006G078600 expressed protein K11426: [histone H3]-lysine4/36 N-trimethyltransferase SMYD


Gene co-expression network
sample Sobic010G201900 Sobic010G201900 Sobic006G100000 Sobic006G100000 Sobic010G201900--Sobic006G100000 Sobic006G215900 Sobic006G215900 Sobic010G201900--Sobic006G215900 Sobic009G199500 Sobic009G199500 Sobic010G201900--Sobic009G199500 Sobic002G299100 Sobic002G299100 Sobic010G201900--Sobic002G299100 Sobic009G194801 Sobic009G194801 Sobic010G201900--Sobic009G194801 Sobic004G316800 Sobic004G316800 Sobic010G201900--Sobic004G316800 Sobic001G176200 Sobic001G176200 Sobic010G201900--Sobic001G176200 Sobic009G015800 Sobic009G015800 Sobic010G201900--Sobic009G015800 Sobic005G154500 Sobic005G154500 Sobic010G201900--Sobic005G154500 Sobic009G040800 Sobic009G040800 Sobic006G100000--Sobic009G040800 Sobic006G100000--Sobic009G015800 Sobic003G442000 Sobic003G442000 Sobic006G100000--Sobic003G442000 Sobic010G209700 Sobic010G209700 Sobic006G100000--Sobic010G209700 Sobic003G343600 Sobic003G343600 Sobic006G100000--Sobic003G343600 Sobic010G278600 Sobic010G278600 Sobic006G100000--Sobic010G278600 Sobic006G100000--Sobic002G299100 Sobic004G197900 Sobic004G197900 Sobic006G100000--Sobic004G197900 Sobic008G152900 Sobic008G152900 Sobic006G100000--Sobic008G152900 Sobic004G219100 Sobic004G219100 Sobic006G215900--Sobic004G219100 Sobic004G067700 Sobic004G067700 Sobic006G215900--Sobic004G067700 Sobic002G158700 Sobic002G158700 Sobic006G215900--Sobic002G158700 Sobic001G106100 Sobic001G106100 Sobic006G215900--Sobic001G106100 Sobic004G111700 Sobic004G111700 Sobic006G215900--Sobic004G111700 Sobic002G103600 Sobic002G103600 Sobic006G215900--Sobic002G103600 Sobic003G039900 Sobic003G039900 Sobic006G215900--Sobic003G039900 Sobic001G376100 Sobic001G376100 Sobic006G215900--Sobic001G376100 Sobic008G149800 Sobic008G149800 Sobic006G215900--Sobic008G149800 Sobic007G158900 Sobic007G158900 Sobic009G199500--Sobic007G158900 Sobic009G227100 Sobic009G227100 Sobic009G199500--Sobic009G227100 Sobic003G445200 Sobic003G445200 Sobic009G199500--Sobic003G445200 Sobic009G199500--Sobic002G299100 Sobic002G131400 Sobic002G131400 Sobic009G199500--Sobic002G131400 Sobic004G122900 Sobic004G122900 Sobic009G199500--Sobic004G122900 Sobic004G084400 Sobic004G084400 Sobic009G199500--Sobic004G084400 Sobic001G043200 Sobic001G043200 Sobic009G199500--Sobic001G043200 Sobic002G398500 Sobic002G398500 Sobic009G199500--Sobic002G398500 Sobic009G137100 Sobic009G137100 Sobic002G299100--Sobic009G137100 Sobic002G197100 Sobic002G197100 Sobic002G299100--Sobic002G197100 Sobic002G370900 Sobic002G370900 Sobic002G299100--Sobic002G370900 Sobic004G246100 Sobic004G246100 Sobic002G299100--Sobic004G246100 Sobic002G299100--Sobic001G176200 Sobic002G299100--Sobic009G040800 Sobic006G082900 Sobic006G082900 Sobic002G299100--Sobic006G082900 Sobic002G299100--Sobic005G154500 Sobic002G299100--Sobic009G199500 Sobic006G258900 Sobic006G258900 Sobic009G194801--Sobic006G258900 Sobic010G027600 Sobic010G027600 Sobic009G194801--Sobic010G027600 Sobic007G115900 Sobic007G115900 Sobic009G194801--Sobic007G115900 Sobic001G043900 Sobic001G043900 Sobic009G194801--Sobic001G043900 Sobic002G347000 Sobic002G347000 Sobic009G194801--Sobic002G347000 Sobic003G417900 Sobic003G417900 Sobic009G194801--Sobic003G417900 Sobic002G306400 Sobic002G306400 Sobic009G194801--Sobic002G306400 Sobic009G058500 Sobic009G058500 Sobic009G194801--Sobic009G058500 Sobic003G178900 Sobic003G178900 Sobic009G194801--Sobic003G178900 Sobic004G316800--Sobic007G115900 Sobic003G211700 Sobic003G211700 Sobic004G316800--Sobic003G211700 Sobic001G522900 Sobic001G522900 Sobic004G316800--Sobic001G522900 Sobic006G092800 Sobic006G092800 Sobic004G316800--Sobic006G092800 Sobic004G316800--Sobic006G258900 Sobic002G378200 Sobic002G378200 Sobic004G316800--Sobic002G378200 Sobic003G374000 Sobic003G374000 Sobic004G316800--Sobic003G374000 Sobic010G074900 Sobic010G074900 Sobic004G316800--Sobic010G074900 Sobic004G007300 Sobic004G007300 Sobic004G316800--Sobic004G007300 Sobic001G090400 Sobic001G090400 Sobic001G176200--Sobic001G090400 Sobic001G176200--Sobic002G370900 Sobic001G176200--Sobic002G197100 Sobic001G176200--Sobic005G154500 Sobic005G015900 Sobic005G015900 Sobic001G176200--Sobic005G015900 Sobic004G345700 Sobic004G345700 Sobic001G176200--Sobic004G345700 Sobic006G173100 Sobic006G173100 Sobic001G176200--Sobic006G173100 Sobic010G245000 Sobic010G245000 Sobic001G176200--Sobic010G245000 Sobic002G320500 Sobic002G320500 Sobic001G176200--Sobic002G320500 Sobic005G015100 Sobic005G015100 Sobic009G015800--Sobic005G015100 Sobic009G225200 Sobic009G225200 Sobic009G015800--Sobic009G225200 Sobic002G259800 Sobic002G259800 Sobic009G015800--Sobic002G259800 Sobic009G015800--Sobic002G158700 Sobic002G421700 Sobic002G421700 Sobic009G015800--Sobic002G421700 Sobic001G087100 Sobic001G087100 Sobic009G015800--Sobic001G087100 Sobic004G232000 Sobic004G232000 Sobic009G015800--Sobic004G232000 Sobic009G015800--Sobic005G015900 Sobic001G315100 Sobic001G315100 Sobic009G015800--Sobic001G315100 Sobic005G154500--Sobic001G176200 Sobic005G154500--Sobic004G345700 Sobic003G241200 Sobic003G241200 Sobic005G154500--Sobic003G241200 Sobic005G154500--Sobic010G245000 Sobic005G154500--Sobic008G149800 Sobic008G173100 Sobic008G173100 Sobic005G154500--Sobic008G173100 Sobic005G154500--Sobic005G015900 Sobic002G357700 Sobic002G357700 Sobic005G154500--Sobic002G357700 Sobic006G116100 Sobic006G116100 Sobic005G154500--Sobic006G116100
Octagon: transcription factors


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