Gene annotation
Transcriptome id Sobic.010G266200.1
Synonym Sb10g030150
Functional annotation calcium-dependent protein kinase CPK1 adapter protein 2, putative, expressed
UniProt A0A194YLL9
Pfam -
Panther DB PTHR31161 PTHR31161:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G17990 : -
RAP-DB (Rice) LOC_Os06g50146.1 : calcium-dependent protein kinase CPK1 adapter protein 2, putative, expressed
MaizeGDB (Corn) Zm00025a018484
Brachypodium KQK17547
Barley -
Wheat TraesCS7B02G288800 , TraesCS7D02G382500 , TraesCS7A02G385900 , TraesCS7A02G385900
Populus -


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cDNA sequences
Sobic.010G266200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G009400 bromodomain domain containing protein, expressed -
2 Sobic.002G399100 zinc finger, RING-type, putative, expressed K15688: E3 ubiquitin-protein ligase MUL1
3 Sobic.003G278500 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
4 Sobic.007G078000 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
5 Sobic.007G026300 pre-mRNA-splicing factor SLU7, putative, expressed K12819: pre-mRNA-processing factor SLU7
6 Sobic.010G260500 pre-mRNA-splicing factor syf2, putative, expressed K12868: pre-mRNA-splicing factor SYF2
7 Sobic.007G104800 expressed protein -
8 Sobic.004G205600 bromodomain domain containing protein, expressed -
9 Sobic.001G131800 expressed protein K15186: ELL-associated factor
10 Sobic.003G333600 OsFBX29 - F-box domain containing protein, expressed -
11 Sobic.009G209200 serine acetyltransferase protein, putative, expressed K00640: serine O-acetyltransferase
12 Sobic.007G134600 agenet domain containing protein, expressed -
13 Sobic.010G068400 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12896: splicing factor, arginine/serine-rich 7
14 Sobic.007G137900 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
15 Sobic.001G517500 Ubiquitin family domain containing protein, expressed K04523: UBQLN, ubiquilin
16 Sobic.001G039600 U-box domain-containing protein, putative, expressed -
17 Sobic.005G198100 FRA10AC1, putative, expressed K13121: protein FRA10AC1
18 Sobic.003G108700 RNA recognition motif, putative, expressed -
19 Sobic.009G205200 OsFBX170 - F-box domain containing protein, expressed -
20 Sobic.009G232700 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit


Gene co-expression network
sample Sobic010G266200 Sobic010G266200 Sobic007G009400 Sobic007G009400 Sobic010G266200--Sobic007G009400 Sobic002G399100 Sobic002G399100 Sobic010G266200--Sobic002G399100 Sobic003G278500 Sobic003G278500 Sobic010G266200--Sobic003G278500 Sobic007G078000 Sobic007G078000 Sobic010G266200--Sobic007G078000 Sobic007G026300 Sobic007G026300 Sobic010G266200--Sobic007G026300 Sobic010G260500 Sobic010G260500 Sobic010G266200--Sobic010G260500 Sobic007G104800 Sobic007G104800 Sobic010G266200--Sobic007G104800 Sobic004G205600 Sobic004G205600 Sobic010G266200--Sobic004G205600 Sobic001G131800 Sobic001G131800 Sobic010G266200--Sobic001G131800 Sobic003G241200 Sobic003G241200 Sobic007G009400--Sobic003G241200 Sobic003G401100 Sobic003G401100 Sobic007G009400--Sobic003G401100 Sobic007G009400--Sobic004G205600 Sobic010G101800 Sobic010G101800 Sobic007G009400--Sobic010G101800 Sobic007G009400--Sobic007G104800 Sobic004G325400 Sobic004G325400 Sobic007G009400--Sobic004G325400 Sobic002G388200 Sobic002G388200 Sobic007G009400--Sobic002G388200 Sobic001G409600 Sobic001G409600 Sobic007G009400--Sobic001G409600 Sobic003G081000 Sobic003G081000 Sobic007G009400--Sobic003G081000 Sobic001G413500 Sobic001G413500 Sobic002G399100--Sobic001G413500 Sobic001G497300 Sobic001G497300 Sobic002G399100--Sobic001G497300 Sobic001G512700 Sobic001G512700 Sobic002G399100--Sobic001G512700 Sobic002G399100--Sobic007G104800 Sobic002G399100--Sobic004G205600 Sobic001G107500 Sobic001G107500 Sobic002G399100--Sobic001G107500 Sobic003G298100 Sobic003G298100 Sobic002G399100--Sobic003G298100 Sobic010G153700 Sobic010G153700 Sobic002G399100--Sobic010G153700 Sobic003G029700 Sobic003G029700 Sobic002G399100--Sobic003G029700 Sobic007G186900 Sobic007G186900 Sobic003G278500--Sobic007G186900 Sobic003G278500--Sobic003G029700 Sobic003G278500--Sobic010G101800 Sobic003G397800 Sobic003G397800 Sobic003G278500--Sobic003G397800 Sobic001G152280 Sobic001G152280 Sobic003G278500--Sobic001G152280 Sobic007G217000 Sobic007G217000 Sobic003G278500--Sobic007G217000 Sobic007G167500 Sobic007G167500 Sobic003G278500--Sobic007G167500 Sobic003G056100 Sobic003G056100 Sobic003G278500--Sobic003G056100 Sobic010G097600 Sobic010G097600 Sobic003G278500--Sobic010G097600 Sobic003G333600 Sobic003G333600 Sobic007G078000--Sobic003G333600 Sobic004G196700 Sobic004G196700 Sobic007G078000--Sobic004G196700 Sobic007G185900 Sobic007G185900 Sobic007G078000--Sobic007G185900 Sobic007G078000--Sobic010G260500 Sobic001G424700 Sobic001G424700 Sobic007G078000--Sobic001G424700 Sobic005G149500 Sobic005G149500 Sobic007G078000--Sobic005G149500 Sobic001G372700 Sobic001G372700 Sobic007G078000--Sobic001G372700 Sobic001G451000 Sobic001G451000 Sobic007G078000--Sobic001G451000 Sobic006G082600 Sobic006G082600 Sobic007G078000--Sobic006G082600 Sobic004G021100 Sobic004G021100 Sobic007G026300--Sobic004G021100 Sobic007G026300--Sobic004G205600 Sobic007G026300--Sobic001G512700 Sobic007G026300--Sobic007G104800 Sobic004G257400 Sobic004G257400 Sobic007G026300--Sobic004G257400 Sobic007G026300--Sobic001G497300 Sobic007G200600 Sobic007G200600 Sobic007G026300--Sobic007G200600 Sobic001G090400 Sobic001G090400 Sobic007G026300--Sobic001G090400 Sobic004G057400 Sobic004G057400 Sobic007G026300--Sobic004G057400 Sobic002G157300 Sobic002G157300 Sobic010G260500--Sobic002G157300 Sobic008G174300 Sobic008G174300 Sobic010G260500--Sobic008G174300 Sobic010G260500--Sobic007G078000 Sobic010G260500--Sobic007G185900 Sobic010G033400 Sobic010G033400 Sobic010G260500--Sobic010G033400 Sobic010G260500--Sobic001G451000 Sobic004G263900 Sobic004G263900 Sobic010G260500--Sobic004G263900 Sobic010G260500--Sobic005G149500 Sobic003G187400 Sobic003G187400 Sobic010G260500--Sobic003G187400 Sobic007G104800--Sobic001G497300 Sobic007G104800--Sobic004G021100 Sobic001G119300 Sobic001G119300 Sobic007G104800--Sobic001G119300 Sobic007G104800--Sobic003G187400 Sobic007G104800--Sobic007G200600 Sobic007G104800--Sobic001G512700 Sobic007G104800--Sobic004G205600 Sobic007G104800--Sobic007G026300 Sobic007G104800--Sobic001G107500 Sobic004G205600--Sobic004G057400 Sobic004G205600--Sobic001G497300 Sobic004G205600--Sobic001G090400 Sobic004G205600--Sobic003G081000 Sobic004G205600--Sobic007G026300 Sobic009G000500 Sobic009G000500 Sobic004G205600--Sobic009G000500 Sobic004G205600--Sobic002G157300 Sobic009G065100 Sobic009G065100 Sobic004G205600--Sobic009G065100 Sobic002G157000 Sobic002G157000 Sobic004G205600--Sobic002G157000 Sobic001G131800--Sobic008G174300 Sobic001G131800--Sobic003G081000 Sobic010G202600 Sobic010G202600 Sobic001G131800--Sobic010G202600 Sobic001G131800--Sobic010G033400 Sobic009G198100 Sobic009G198100 Sobic001G131800--Sobic009G198100 Sobic007G132400 Sobic007G132400 Sobic001G131800--Sobic007G132400 Sobic001G131800--Sobic001G107500 Sobic007G111100 Sobic007G111100 Sobic001G131800--Sobic007G111100 Sobic003G359300 Sobic003G359300 Sobic001G131800--Sobic003G359300
Octagon: transcription factors


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