Gene annotation
Transcriptome id Sobic.001G204501.1,Sobic.001G204501.3,Sobic.001G204501.2
Synonym -
Functional annotation -
UniProt A0A1Z5S6L9 , A0A1B6QJZ0 , A0A1B6QK14
Pfam -
Panther DB PTHR35467 PTHR35467:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28100 : -
RAP-DB (Rice) LOC_Os10g35644.1 : expressed protein
MaizeGDB (Corn) Zm00025a006438
Brachypodium KQJ97308
Barley HORVU1Hr1G045080.1 , HORVU1Hr1G045080.2 , HORVU1Hr1G045080.3 , HORVU1Hr1G045080.5 , HORVU1Hr1G045080.8 , HORVU1Hr1G045080.9 , HORVU1Hr1G045080.22 , HORVU1Hr1G045080.20 , HORVU1Hr1G045080.21 , HORVU1Hr1G045080.18 , HORVU1Hr1G045080.19 , HORVU1Hr1G045080.12 , HORVU1Hr1G045080.10 , HORVU1Hr1G045080.16 , HORVU1Hr1G045080.17 , HORVU1Hr1G045080.14 , HORVU1Hr1G045080.15
Wheat TraesCS1A02G169500 , TraesCS1A02G169500 , TraesCS1D02G167400 , TraesCS1D02G167400 , TraesCS1B02G187500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G045450 - -
2 Sobic.002G291300 hydrolase, NUDIX family protein, expressed K18453: ADP-ribose/FAD diphosphatase
3 Sobic.004G179600 VP15, putative, expressed K03635: MOCS2B, molybdopterin synthase catalytic subunit
4 Sobic.001G295600 myb-like transcription factor family protein(PubMedID : 26465154)@MYB family transcription factor, putative, expressed -
5 Sobic.001G371300 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
6 Sobic.004G035200 - -
7 Sobic.006G256500 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
8 Sobic.004G293700 peroxisomal biogenesis factor 19, putative, expressed K13337: peroxin-19
9 Sobic.002G411300 expressed protein -
10 Sobic.001G208900 G-patch domain containing protein, expressed -
11 Sobic.003G293900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@plant-specific domain TIGR01615 family protein, expressed -
12 Sobic.003G337000 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
13 Sobic.006G163100 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
14 Sobic.003G273100 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
15 Sobic.010G237000 coiled-coil domain-containing protein 72, putative, expressed -
16 Sobic.010G091900 -(PubMedID : 26320239)@HVA22, putative, expressed -
17 Sobic.003G180300 expressed protein -
18 Sobic.008G075900 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
19 Sobic.001G415500 zinc finger, C3HC4 type domain containing protein, expressed K13125: nitric oxide synthase-interacting protein
20 Sobic.001G497500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G204501 Sobic001G204501 Sobic008G045450 Sobic008G045450 Sobic001G204501--Sobic008G045450 Sobic002G291300 Sobic002G291300 Sobic001G204501--Sobic002G291300 Sobic004G179600 Sobic004G179600 Sobic001G204501--Sobic004G179600 Sobic001G295600 Sobic001G295600 Sobic001G204501--Sobic001G295600 Sobic001G371300 Sobic001G371300 Sobic001G204501--Sobic001G371300 Sobic004G035200 Sobic004G035200 Sobic001G204501--Sobic004G035200 Sobic006G256500 Sobic006G256500 Sobic001G204501--Sobic006G256500 Sobic004G293700 Sobic004G293700 Sobic001G204501--Sobic004G293700 Sobic002G411300 Sobic002G411300 Sobic001G204501--Sobic002G411300 Sobic008G045450--Sobic001G371300 Sobic008G045450--Sobic001G204501 Sobic003G273100 Sobic003G273100 Sobic008G045450--Sobic003G273100 Sobic001G247400 Sobic001G247400 Sobic008G045450--Sobic001G247400 Sobic004G274700 Sobic004G274700 Sobic008G045450--Sobic004G274700 Sobic002G272800 Sobic002G272800 Sobic008G045450--Sobic002G272800 Sobic008G045450--Sobic001G295600 Sobic008G045450--Sobic002G291300 Sobic003G296600 Sobic003G296600 Sobic008G045450--Sobic003G296600 Sobic002G291300--Sobic001G371300 Sobic001G056700 Sobic001G056700 Sobic002G291300--Sobic001G056700 Sobic002G291300--Sobic003G273100 Sobic001G427800 Sobic001G427800 Sobic002G291300--Sobic001G427800 Sobic001G230700 Sobic001G230700 Sobic002G291300--Sobic001G230700 Sobic001G471900 Sobic001G471900 Sobic002G291300--Sobic001G471900 Sobic007G126100 Sobic007G126100 Sobic002G291300--Sobic007G126100 Sobic001G478300 Sobic001G478300 Sobic002G291300--Sobic001G478300 Sobic004G164500 Sobic004G164500 Sobic002G291300--Sobic004G164500 Sobic007G025500 Sobic007G025500 Sobic004G179600--Sobic007G025500 Sobic007G107000 Sobic007G107000 Sobic004G179600--Sobic007G107000 Sobic002G212200 Sobic002G212200 Sobic004G179600--Sobic002G212200 Sobic002G319100 Sobic002G319100 Sobic004G179600--Sobic002G319100 Sobic009G023200 Sobic009G023200 Sobic004G179600--Sobic009G023200 Sobic003G362100 Sobic003G362100 Sobic004G179600--Sobic003G362100 Sobic005G228000 Sobic005G228000 Sobic004G179600--Sobic005G228000 Sobic001G019900 Sobic001G019900 Sobic004G179600--Sobic001G019900 Sobic001G252300 Sobic001G252300 Sobic004G179600--Sobic001G252300 Sobic001G295600--Sobic008G045450 Sobic001G295600--Sobic001G247400 Sobic010G092100 Sobic010G092100 Sobic001G295600--Sobic010G092100 Sobic001G295600--Sobic003G296600 Sobic002G246600 Sobic002G246600 Sobic001G295600--Sobic002G246600 Sobic001G295600--Sobic001G204501 Sobic002G376700 Sobic002G376700 Sobic001G295600--Sobic002G376700 Sobic007G028700 Sobic007G028700 Sobic001G295600--Sobic007G028700 Sobic001G038500 Sobic001G038500 Sobic001G295600--Sobic001G038500 Sobic001G371300--Sobic003G273100 Sobic001G371300--Sobic002G291300 Sobic001G371300--Sobic001G478300 Sobic001G371300--Sobic004G274700 Sobic001G371300--Sobic001G427800 Sobic004G079100 Sobic004G079100 Sobic001G371300--Sobic004G079100 Sobic010G083700 Sobic010G083700 Sobic001G371300--Sobic010G083700 Sobic001G371300--Sobic001G056700 Sobic001G149700 Sobic001G149700 Sobic001G371300--Sobic001G149700 Sobic004G166400 Sobic004G166400 Sobic004G035200--Sobic004G166400 Sobic004G035200--Sobic004G179600 Sobic006G157200 Sobic006G157200 Sobic004G035200--Sobic006G157200 Sobic010G057100 Sobic010G057100 Sobic004G035200--Sobic010G057100 Sobic004G335600 Sobic004G335600 Sobic004G035200--Sobic004G335600 Sobic006G163100 Sobic006G163100 Sobic004G035200--Sobic006G163100 Sobic009G075900 Sobic009G075900 Sobic004G035200--Sobic009G075900 Sobic006G274700 Sobic006G274700 Sobic004G035200--Sobic006G274700 Sobic002G254200 Sobic002G254200 Sobic004G035200--Sobic002G254200 Sobic009G036900 Sobic009G036900 Sobic006G256500--Sobic009G036900 Sobic002G068300 Sobic002G068300 Sobic006G256500--Sobic002G068300 Sobic004G248800 Sobic004G248800 Sobic006G256500--Sobic004G248800 Sobic007G163700 Sobic007G163700 Sobic006G256500--Sobic007G163700 Sobic001G529000 Sobic001G529000 Sobic006G256500--Sobic001G529000 Sobic010G039800 Sobic010G039800 Sobic006G256500--Sobic010G039800 Sobic009G016201 Sobic009G016201 Sobic006G256500--Sobic009G016201 Sobic001G162000 Sobic001G162000 Sobic006G256500--Sobic001G162000 Sobic010G243200 Sobic010G243200 Sobic006G256500--Sobic010G243200 Sobic010G253800 Sobic010G253800 Sobic004G293700--Sobic010G253800 Sobic004G293700--Sobic004G079100 Sobic004G293700--Sobic010G083700 Sobic001G054200 Sobic001G054200 Sobic004G293700--Sobic001G054200 Sobic004G293700--Sobic004G248800 Sobic009G171700 Sobic009G171700 Sobic004G293700--Sobic009G171700 Sobic002G264400 Sobic002G264400 Sobic004G293700--Sobic002G264400 Sobic006G141500 Sobic006G141500 Sobic004G293700--Sobic006G141500 Sobic003G220600 Sobic003G220600 Sobic004G293700--Sobic003G220600 Sobic008G073600 Sobic008G073600 Sobic002G411300--Sobic008G073600 Sobic002G411300--Sobic001G478300 Sobic010G058500 Sobic010G058500 Sobic002G411300--Sobic010G058500 Sobic004G203100 Sobic004G203100 Sobic002G411300--Sobic004G203100 Sobic002G411300--Sobic001G427800 Sobic010G144400 Sobic010G144400 Sobic002G411300--Sobic010G144400 Sobic004G349000 Sobic004G349000 Sobic002G411300--Sobic004G349000 Sobic002G411300--Sobic009G036900 Sobic004G153200 Sobic004G153200 Sobic002G411300--Sobic004G153200
Octagon: transcription factors


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