Gene annotation
Transcriptome id Sobic.001G295600.1
Synonym Sb01g028870
Functional annotation myb-like transcription factor family protein (PubMedID : 26465154)
MYB family transcription factor, putative, expressed
UniProt C5WRH9
Pfam PF00249
Panther DB PTHR12374 PTHR12374:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G61620 : myb-like transcription factor family protein
RAP-DB (Rice) LOC_Os10g41260.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a003384
Brachypodium KQJ97811
Barley HORVU1Hr1G055900.4 , HORVU1Hr1G055900.5 , HORVU1Hr1G055900.6 , HORVU1Hr1G055900.7 , HORVU1Hr1G055900.1 , HORVU1Hr1G055900.2
Wheat TraesCS1D02G220500 , TraesCS1B02G232300 , TraesCS1B02G232300 , TraesCS1A02G218800
Populus -


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cDNA sequences
Sobic.001G295600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G045450 - -
2 Sobic.001G247400 plant-specific domain TIGR01615 family protein, expressed -
3 Sobic.010G092100 PCF-like (ClassI) Subclade 5 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP-domain protein, putative, expressed -
4 Sobic.003G296600 coiled-coil domain-containing protein 25, putative, expressed -
5 Sobic.002G246600 helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.001G204501 - -
7 Sobic.002G376700 EF hand family protein, putative -
8 Sobic.007G028700 LSD1 zinc finger domain containing protein, expressed -
9 Sobic.001G038500 ANT1, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
10 Sobic.006G241350 - -
11 Sobic.003G293900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@plant-specific domain TIGR01615 family protein, expressed -
12 Sobic.001G032100 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
13 Sobic.001G465100 hydrolase, alpha/beta fold family domain containing protein, expressed -
14 Sobic.004G279700 expressed protein -
15 Sobic.006G163100 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
16 Sobic.001G078900 MYB(PubMedID : 28944535)@MYB family transcription factor, putative, expressed -
17 Sobic.001G484800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@acetyltransferase, GNAT family, putative, expressed -
18 Sobic.003G345400 NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
19 Sobic.001G225100 expressed protein -
20 Sobic.001G463100 zinc finger, C3HC4 type domain containing protein, expressed -


Gene co-expression network
sample Sobic001G295600 Sobic001G295600 Sobic008G045450 Sobic008G045450 Sobic001G295600--Sobic008G045450 Sobic001G247400 Sobic001G247400 Sobic001G295600--Sobic001G247400 Sobic010G092100 Sobic010G092100 Sobic001G295600--Sobic010G092100 Sobic003G296600 Sobic003G296600 Sobic001G295600--Sobic003G296600 Sobic002G246600 Sobic002G246600 Sobic001G295600--Sobic002G246600 Sobic001G204501 Sobic001G204501 Sobic001G295600--Sobic001G204501 Sobic002G376700 Sobic002G376700 Sobic001G295600--Sobic002G376700 Sobic007G028700 Sobic007G028700 Sobic001G295600--Sobic007G028700 Sobic001G038500 Sobic001G038500 Sobic001G295600--Sobic001G038500 Sobic001G371300 Sobic001G371300 Sobic008G045450--Sobic001G371300 Sobic008G045450--Sobic001G204501 Sobic003G273100 Sobic003G273100 Sobic008G045450--Sobic003G273100 Sobic008G045450--Sobic001G247400 Sobic004G274700 Sobic004G274700 Sobic008G045450--Sobic004G274700 Sobic002G272800 Sobic002G272800 Sobic008G045450--Sobic002G272800 Sobic008G045450--Sobic001G295600 Sobic002G291300 Sobic002G291300 Sobic008G045450--Sobic002G291300 Sobic008G045450--Sobic003G296600 Sobic001G247400--Sobic003G296600 Sobic001G032100 Sobic001G032100 Sobic001G247400--Sobic001G032100 Sobic001G225100 Sobic001G225100 Sobic001G247400--Sobic001G225100 Sobic003G034500 Sobic003G034500 Sobic001G247400--Sobic003G034500 Sobic009G022000 Sobic009G022000 Sobic001G247400--Sobic009G022000 Sobic003G293900 Sobic003G293900 Sobic001G247400--Sobic003G293900 Sobic004G164500 Sobic004G164500 Sobic001G247400--Sobic004G164500 Sobic001G311000 Sobic001G311000 Sobic001G247400--Sobic001G311000 Sobic001G247400--Sobic002G246600 Sobic010G092100--Sobic001G038500 Sobic001G361900 Sobic001G361900 Sobic010G092100--Sobic001G361900 Sobic009G010700 Sobic009G010700 Sobic010G092100--Sobic009G010700 Sobic007G159800 Sobic007G159800 Sobic010G092100--Sobic007G159800 Sobic003G178700 Sobic003G178700 Sobic010G092100--Sobic003G178700 Sobic010G092100--Sobic002G376700 Sobic006G204200 Sobic006G204200 Sobic010G092100--Sobic006G204200 Sobic001G084600 Sobic001G084600 Sobic010G092100--Sobic001G084600 Sobic008G163700 Sobic008G163700 Sobic010G092100--Sobic008G163700 Sobic003G296600--Sobic001G032100 Sobic003G296600--Sobic003G293900 Sobic003G296600--Sobic001G247400 Sobic004G221900 Sobic004G221900 Sobic003G296600--Sobic004G221900 Sobic003G296600--Sobic001G225100 Sobic006G194150 Sobic006G194150 Sobic003G296600--Sobic006G194150 Sobic003G296600--Sobic002G246600 Sobic001G230700 Sobic001G230700 Sobic003G296600--Sobic001G230700 Sobic006G184300 Sobic006G184300 Sobic003G296600--Sobic006G184300 Sobic002G246600--Sobic003G296600 Sobic002G246600--Sobic001G032100 Sobic002G246600--Sobic001G247400 Sobic002G246600--Sobic001G225100 Sobic003G324000 Sobic003G324000 Sobic002G246600--Sobic003G324000 Sobic002G246600--Sobic001G038500 Sobic002G246600--Sobic004G221900 Sobic002G246600--Sobic003G293900 Sobic002G226000 Sobic002G226000 Sobic002G246600--Sobic002G226000 Sobic001G204501--Sobic008G045450 Sobic001G204501--Sobic002G291300 Sobic004G179600 Sobic004G179600 Sobic001G204501--Sobic004G179600 Sobic001G204501--Sobic001G295600 Sobic001G204501--Sobic001G371300 Sobic004G035200 Sobic004G035200 Sobic001G204501--Sobic004G035200 Sobic006G256500 Sobic006G256500 Sobic001G204501--Sobic006G256500 Sobic004G293700 Sobic004G293700 Sobic001G204501--Sobic004G293700 Sobic002G411300 Sobic002G411300 Sobic001G204501--Sobic002G411300 Sobic001G217700 Sobic001G217700 Sobic002G376700--Sobic001G217700 Sobic001G053900 Sobic001G053900 Sobic002G376700--Sobic001G053900 Sobic005G002600 Sobic005G002600 Sobic002G376700--Sobic005G002600 Sobic001G465100 Sobic001G465100 Sobic002G376700--Sobic001G465100 Sobic003G320600 Sobic003G320600 Sobic002G376700--Sobic003G320600 Sobic010G214000 Sobic010G214000 Sobic002G376700--Sobic010G214000 Sobic010G246600 Sobic010G246600 Sobic002G376700--Sobic010G246600 Sobic004G113800 Sobic004G113800 Sobic002G376700--Sobic004G113800 Sobic001G291200 Sobic001G291200 Sobic002G376700--Sobic001G291200 Sobic006G241350 Sobic006G241350 Sobic007G028700--Sobic006G241350 Sobic007G028700--Sobic001G465100 Sobic002G367700 Sobic002G367700 Sobic007G028700--Sobic002G367700 Sobic004G325900 Sobic004G325900 Sobic007G028700--Sobic004G325900 Sobic007G028700--Sobic001G032100 Sobic007G028700--Sobic004G221900 Sobic007G028700--Sobic001G247400 Sobic007G028700--Sobic003G296600 Sobic001G078900 Sobic001G078900 Sobic007G028700--Sobic001G078900 Sobic001G038500--Sobic010G092100 Sobic001G038500--Sobic007G159800 Sobic001G038500--Sobic006G204200 Sobic001G038500--Sobic002G246600 Sobic001G038500--Sobic001G361900 Sobic003G057800 Sobic003G057800 Sobic001G038500--Sobic003G057800 Sobic003G357500 Sobic003G357500 Sobic001G038500--Sobic003G357500 Sobic003G357600 Sobic003G357600 Sobic001G038500--Sobic003G357600 Sobic001G038500--Sobic008G163700
Octagon: transcription factors


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