Gene annotation
Transcriptome id Sobic.001G316300.1
Synonym Sb01g030720
Functional annotation DUF623 domain containing protein, expressed
UniProt C5WUG4
Pfam PF04844
Panther DB PTHR33057 PTHR33057:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36026 : Ovate family protein
RAP-DB (Rice) LOC_Os10g38880.1 : DUF623 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a052238 , Zm00025a000352 , Zm00025a003122
Brachypodium KQJ97569 , KQK00772
Barley HORVU1Hr1G049440.1 , HORVU4Hr1G083150.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G303900 CPuORF23 - conserved peptide uORF-containing transcript, expressed K01087: trehalose 6-phosphate phosphatase
2 Sobic.009G157800 transporter family protein, putative, expressed -
3 Sobic.002G228900 RNA recognition motif containing protein, putative, expressed -
4 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
5 Sobic.002G113200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -
7 Sobic.004G173700 SLL1 protein, putative, expressed -
8 Sobic.003G234500 CA(PubMedID : 19549309)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
9 Sobic.004G247500 "HD-zip transcription factor, ortholog of sihdz02 of foxtail millet (Setaria italica L.)"(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase
10 Sobic.008G071300 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
11 Sobic.004G154100 OsFBX346 - F-box domain containing protein, expressed -
12 Sobic.009G189700 - -
13 Sobic.001G365700 OsRhmbd13 - Putative Rhomboid homologue, expressed -
14 Sobic.008G139500 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
15 Sobic.007G220200 harpin-induced protein 1 domain containing protein, expressed -
16 Sobic.003G005100 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
17 Sobic.003G284100 expressed protein -
18 Sobic.006G267100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.006G120900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
20 Sobic.007G138100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -


Gene co-expression network
sample Sobic001G316300 Sobic001G316300 Sobic001G303900 Sobic001G303900 Sobic001G316300--Sobic001G303900 Sobic009G157800 Sobic009G157800 Sobic001G316300--Sobic009G157800 Sobic002G228900 Sobic002G228900 Sobic001G316300--Sobic002G228900 Sobic003G212000 Sobic003G212000 Sobic001G316300--Sobic003G212000 Sobic002G113200 Sobic002G113200 Sobic001G316300--Sobic002G113200 Sobic003G137600 Sobic003G137600 Sobic001G316300--Sobic003G137600 Sobic004G173700 Sobic004G173700 Sobic001G316300--Sobic004G173700 Sobic003G234500 Sobic003G234500 Sobic001G316300--Sobic003G234500 Sobic004G247500 Sobic004G247500 Sobic001G316300--Sobic004G247500 Sobic001G303900--Sobic004G247500 Sobic009G189700 Sobic009G189700 Sobic001G303900--Sobic009G189700 Sobic005G050400 Sobic005G050400 Sobic001G303900--Sobic005G050400 Sobic004G120500 Sobic004G120500 Sobic001G303900--Sobic004G120500 Sobic003G013700 Sobic003G013700 Sobic001G303900--Sobic003G013700 Sobic005G144000 Sobic005G144000 Sobic001G303900--Sobic005G144000 Sobic003G089100 Sobic003G089100 Sobic001G303900--Sobic003G089100 Sobic001G342101 Sobic001G342101 Sobic001G303900--Sobic001G342101 Sobic002G420600 Sobic002G420600 Sobic001G303900--Sobic002G420600 Sobic009G157800--Sobic005G144000 Sobic008G071300 Sobic008G071300 Sobic009G157800--Sobic008G071300 Sobic004G154100 Sobic004G154100 Sobic009G157800--Sobic004G154100 Sobic008G122800 Sobic008G122800 Sobic009G157800--Sobic008G122800 Sobic001G039100 Sobic001G039100 Sobic009G157800--Sobic001G039100 Sobic004G180100 Sobic004G180100 Sobic009G157800--Sobic004G180100 Sobic001G503600 Sobic001G503600 Sobic009G157800--Sobic001G503600 Sobic009G157800--Sobic003G212000 Sobic002G170100 Sobic002G170100 Sobic009G157800--Sobic002G170100 Sobic002G228900--Sobic004G173700 Sobic002G228900--Sobic002G113200 Sobic002G228900--Sobic003G212000 Sobic003G284100 Sobic003G284100 Sobic002G228900--Sobic003G284100 Sobic002G228900--Sobic003G234500 Sobic002G228900--Sobic003G137600 Sobic002G228900--Sobic003G089100 Sobic002G228900--Sobic009G157800 Sobic002G255400 Sobic002G255400 Sobic002G228900--Sobic002G255400 Sobic003G212000--Sobic003G234500 Sobic003G212000--Sobic008G071300 Sobic003G212000--Sobic002G113200 Sobic006G267100 Sobic006G267100 Sobic003G212000--Sobic006G267100 Sobic003G212000--Sobic009G189700 Sobic003G212000--Sobic005G144000 Sobic003G212000--Sobic001G503600 Sobic002G389600 Sobic002G389600 Sobic003G212000--Sobic002G389600 Sobic003G212000--Sobic002G170100 Sobic002G113200--Sobic003G212000 Sobic002G113200--Sobic008G071300 Sobic002G113200--Sobic003G234500 Sobic002G113200--Sobic009G157800 Sobic004G279200 Sobic004G279200 Sobic002G113200--Sobic004G279200 Sobic002G113200--Sobic001G503600 Sobic002G113200--Sobic006G267100 Sobic002G113200--Sobic003G284100 Sobic010G043250 Sobic010G043250 Sobic002G113200--Sobic010G043250 Sobic003G137600--Sobic004G173700 Sobic003G137600--Sobic003G212000 Sobic003G137600--Sobic003G234500 Sobic006G120900 Sobic006G120900 Sobic003G137600--Sobic006G120900 Sobic003G137600--Sobic002G113200 Sobic001G365700 Sobic001G365700 Sobic003G137600--Sobic001G365700 Sobic007G212100 Sobic007G212100 Sobic003G137600--Sobic007G212100 Sobic003G137600--Sobic003G284100 Sobic003G137600--Sobic009G189700 Sobic004G173700--Sobic003G137600 Sobic004G173700--Sobic006G120900 Sobic004G173700--Sobic002G420600 Sobic001G387200 Sobic001G387200 Sobic004G173700--Sobic001G387200 Sobic004G173700--Sobic001G365700 Sobic003G129900 Sobic003G129900 Sobic004G173700--Sobic003G129900 Sobic004G173700--Sobic007G212100 Sobic004G173700--Sobic001G303900 Sobic008G018300 Sobic008G018300 Sobic004G173700--Sobic008G018300 Sobic003G234500--Sobic003G212000 Sobic003G234500--Sobic008G071300 Sobic003G234500--Sobic006G267100 Sobic003G234500--Sobic005G144000 Sobic003G234500--Sobic002G170100 Sobic003G234500--Sobic009G189700 Sobic003G234500--Sobic004G180100 Sobic003G234500--Sobic008G122800 Sobic003G110932 Sobic003G110932 Sobic003G234500--Sobic003G110932 Sobic004G247500--Sobic001G303900 Sobic004G247500--Sobic009G157800 Sobic004G247500--Sobic009G189700 Sobic006G070564 Sobic006G070564 Sobic004G247500--Sobic006G070564 Sobic003G340000 Sobic003G340000 Sobic004G247500--Sobic003G340000 Sobic008G050900 Sobic008G050900 Sobic004G247500--Sobic008G050900 Sobic004G247500--Sobic005G144000 Sobic005G074300 Sobic005G074300 Sobic004G247500--Sobic005G074300 Sobic009G176600 Sobic009G176600 Sobic004G247500--Sobic009G176600
Octagon: transcription factors


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