Gene annotation
Transcriptome id Sobic.002G047000.2
Synonym ECT4, Sb02g003990
Functional annotation YT521-B, putative, expressed
UniProt A0A1B6Q971
Pfam PF04146
Panther DB PTHR12357 PTHR12357:SF34
NCBI CDD KOG1901; Uncharacterized high-glucose-regulated protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G13460 : evolutionarily conserved C-terminal region 2
RAP-DB (Rice) LOC_Os07g07490.1 : YT521-B, putative, expressed
MaizeGDB (Corn) Zm00025a045109 , Zm00025a016097
Brachypodium KQK12785 , KQK12787 , KQK12786
Barley HORVU5Hr1G104390.1 , HORVU5Hr1G104380.3 , HORVU5Hr1G104380.2 , HORVU5Hr1G104380.1 , HORVU5Hr1G104390.2 , HORVU5Hr1G104390.3 , HORVU5Hr1G104390.4 , HORVU5Hr1G104390.6 , HORVU5Hr1G104390.7 , HORVU5Hr1G104390.8 , HORVU5Hr1G104390.9 , HORVU5Hr1G104380.4
Wheat TraesCS5B02G432900 , TraesCS5B02G432900 , TraesCS5D02G439200 , TraesCS5B02G433000 , TraesCS5B02G433000 , TraesCS5B02G433000 , TraesCS5A02G431100
Populus -


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cDNA sequences
Sobic.002G047000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G045900 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
2 Sobic.008G160000 tetratricopeptide repeat domain containing protein, expressed -
3 Sobic.002G234300 NOL1/NOP2/sun family protein, putative, expressed K15334: NCL1, multisite-specific tRNA:(cytosine-C5)-methyltransferase
4 Sobic.001G431400 40S ribosomal protein S3a, putative, expressed K02984: RP-S3Ae, small subunit ribosomal protein S3Ae
5 Sobic.004G256000 NOL1/NOP2/sun family protein, putative, expressed K14835: 25S rRNA (cytosine2870-C5)-methyltransferase
6 Sobic.010G142700 - -
7 Sobic.001G052400 RNA recognition motif containing protein, putative, expressed K14573: NOP4, nucleolar protein 4
8 Sobic.009G016400 RNA recognition motif containing protein, expressed -
9 Sobic.008G169200 SRP40, C-terminal domain containing protein, expressed -
10 Sobic.004G340400 translation initiation factor eIF-2B subunit epsilon, putative, expressed K03240: translation initiation factor eIF-2B subunit epsilon
11 Sobic.003G275600 ribosomal RNA assembly protein mis3, putative, expressed K06961: ribosomal RNA assembly protein
12 Sobic.002G408900 adenyl cyclase, putative, expressed -
13 Sobic.010G206300 tRNA synthetase class I, putative, expressed K01870: IARS, isoleucyl-tRNA synthetase
14 Sobic.010G236600 oligopeptidase, putative, expressed K01410: mitochondrial intermediate peptidase
15 Sobic.004G224600 expressed protein -
16 Sobic.006G193300 nucleolar complex protein, putative, expressed K14771: NOC4, U3 small nucleolar RNA-associated protein 19
17 Sobic.002G112100 - K14811: ATP-dependent RNA helicase DBP3
18 Sobic.001G453400 CCAAT/enhancer-binding protein, putative, expressed K14832: MAK21, NOC1, ribosome biogenesis protein MAK21
19 Sobic.006G269900 bystin, putative, expressed K14797: ENP1, essential nuclear protein 1
20 Sobic.001G455800 methionyl-tRNA synthetase, putative, expressed K01874: MARS, methionyl-tRNA synthetase


Gene co-expression network
sample Sobic002G047000 Sobic002G047000 Sobic009G045900 Sobic009G045900 Sobic002G047000--Sobic009G045900 Sobic008G160000 Sobic008G160000 Sobic002G047000--Sobic008G160000 Sobic002G234300 Sobic002G234300 Sobic002G047000--Sobic002G234300 Sobic001G431400 Sobic001G431400 Sobic002G047000--Sobic001G431400 Sobic004G256000 Sobic004G256000 Sobic002G047000--Sobic004G256000 Sobic010G142700 Sobic010G142700 Sobic002G047000--Sobic010G142700 Sobic001G052400 Sobic001G052400 Sobic002G047000--Sobic001G052400 Sobic009G016400 Sobic009G016400 Sobic002G047000--Sobic009G016400 Sobic008G169200 Sobic008G169200 Sobic002G047000--Sobic008G169200 Sobic008G135200 Sobic008G135200 Sobic009G045900--Sobic008G135200 Sobic009G045900--Sobic002G047000 Sobic002G246700 Sobic002G246700 Sobic009G045900--Sobic002G246700 Sobic002G408900 Sobic002G408900 Sobic009G045900--Sobic002G408900 Sobic001G090100 Sobic001G090100 Sobic009G045900--Sobic001G090100 Sobic003G314700 Sobic003G314700 Sobic009G045900--Sobic003G314700 Sobic010G206300 Sobic010G206300 Sobic009G045900--Sobic010G206300 Sobic001G248100 Sobic001G248100 Sobic009G045900--Sobic001G248100 Sobic001G537500 Sobic001G537500 Sobic009G045900--Sobic001G537500 Sobic004G340400 Sobic004G340400 Sobic008G160000--Sobic004G340400 Sobic001G455800 Sobic001G455800 Sobic008G160000--Sobic001G455800 Sobic001G259000 Sobic001G259000 Sobic008G160000--Sobic001G259000 Sobic009G138700 Sobic009G138700 Sobic008G160000--Sobic009G138700 Sobic002G150700 Sobic002G150700 Sobic008G160000--Sobic002G150700 Sobic008G160000--Sobic009G016400 Sobic001G145400 Sobic001G145400 Sobic008G160000--Sobic001G145400 Sobic006G002800 Sobic006G002800 Sobic008G160000--Sobic006G002800 Sobic004G224600 Sobic004G224600 Sobic008G160000--Sobic004G224600 Sobic002G071400 Sobic002G071400 Sobic002G234300--Sobic002G071400 Sobic002G234300--Sobic004G256000 Sobic008G049100 Sobic008G049100 Sobic002G234300--Sobic008G049100 Sobic001G110600 Sobic001G110600 Sobic002G234300--Sobic001G110600 Sobic009G217200 Sobic009G217200 Sobic002G234300--Sobic009G217200 Sobic001G453400 Sobic001G453400 Sobic002G234300--Sobic001G453400 Sobic010G003400 Sobic010G003400 Sobic002G234300--Sobic010G003400 Sobic009G246500 Sobic009G246500 Sobic002G234300--Sobic009G246500 Sobic003G199300 Sobic003G199300 Sobic002G234300--Sobic003G199300 Sobic002G171300 Sobic002G171300 Sobic001G431400--Sobic002G171300 Sobic001G431400--Sobic010G142700 Sobic001G431400--Sobic002G047000 Sobic009G124900 Sobic009G124900 Sobic001G431400--Sobic009G124900 Sobic003G032600 Sobic003G032600 Sobic001G431400--Sobic003G032600 Sobic001G431400--Sobic009G045900 Sobic004G315500 Sobic004G315500 Sobic001G431400--Sobic004G315500 Sobic001G431400--Sobic001G248100 Sobic009G134900 Sobic009G134900 Sobic001G431400--Sobic009G134900 Sobic004G256000--Sobic002G234300 Sobic002G112100 Sobic002G112100 Sobic004G256000--Sobic002G112100 Sobic004G256000--Sobic009G246500 Sobic004G256000--Sobic002G071400 Sobic009G249800 Sobic009G249800 Sobic004G256000--Sobic009G249800 Sobic006G269900 Sobic006G269900 Sobic004G256000--Sobic006G269900 Sobic004G256000--Sobic008G169200 Sobic004G256000--Sobic008G049100 Sobic004G256000--Sobic008G160000 Sobic010G142700--Sobic001G431400 Sobic010G142700--Sobic002G047000 Sobic002G231500 Sobic002G231500 Sobic010G142700--Sobic002G231500 Sobic002G389900 Sobic002G389900 Sobic010G142700--Sobic002G389900 Sobic005G189300 Sobic005G189300 Sobic010G142700--Sobic005G189300 Sobic010G142700--Sobic009G016400 Sobic010G142700--Sobic002G112100 Sobic006G057600 Sobic006G057600 Sobic010G142700--Sobic006G057600 Sobic007G197450 Sobic007G197450 Sobic010G142700--Sobic007G197450 Sobic004G320500 Sobic004G320500 Sobic001G052400--Sobic004G320500 Sobic001G052400--Sobic010G003400 Sobic001G052400--Sobic001G453400 Sobic007G217100 Sobic007G217100 Sobic001G052400--Sobic007G217100 Sobic003G042400 Sobic003G042400 Sobic001G052400--Sobic003G042400 Sobic001G052400--Sobic004G340400 Sobic006G086600 Sobic006G086600 Sobic001G052400--Sobic006G086600 Sobic010G174700 Sobic010G174700 Sobic001G052400--Sobic010G174700 Sobic006G125900 Sobic006G125900 Sobic001G052400--Sobic006G125900 Sobic009G016400--Sobic001G455800 Sobic009G016400--Sobic004G340400 Sobic009G016400--Sobic008G160000 Sobic009G016400--Sobic004G320500 Sobic009G016400--Sobic001G052400 Sobic002G256700 Sobic002G256700 Sobic009G016400--Sobic002G256700 Sobic004G145000 Sobic004G145000 Sobic009G016400--Sobic004G145000 Sobic009G046100 Sobic009G046100 Sobic009G016400--Sobic009G046100 Sobic001G401500 Sobic001G401500 Sobic009G016400--Sobic001G401500 Sobic008G169200--Sobic004G256000 Sobic008G169200--Sobic009G249800 Sobic008G169200--Sobic009G045900 Sobic008G169200--Sobic002G047000 Sobic010G236600 Sobic010G236600 Sobic008G169200--Sobic010G236600 Sobic008G169200--Sobic006G269900 Sobic004G252000 Sobic004G252000 Sobic008G169200--Sobic004G252000 Sobic010G233100 Sobic010G233100 Sobic008G169200--Sobic010G233100 Sobic008G169200--Sobic002G234300
Octagon: transcription factors


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