Gene annotation
Transcriptome id Sobic.006G269900.1
Synonym Sb06g033140
Functional annotation bystin, putative, expressed
UniProt A0A1B6PP55
Pfam PF05291
Panther DB PTHR12821 PTHR12821:SF0
NCBI CDD KOG3871; Cell adhesion complex protein bystin
KEGG Orthology K14797; ENP1, essential nuclear protein 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G31660 : -
RAP-DB (Rice) LOC_Os09g18320.1 : bystin, putative, expressed
MaizeGDB (Corn) Zm00025a009269
Brachypodium KQJ85337 , KQK16738 , KQK16739 , KQK16740 , KQK16737
Barley -
Wheat TraesCS2B02G595600 , TraesCS2A02G587700 , TraesCS2A02G587700 , TraesCS2D02G565600
Populus -


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cDNA sequences
Sobic.006G269900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G084000 CDK5RAP1, putative, expressed K15865: threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1
2 Sobic.008G160000 tetratricopeptide repeat domain containing protein, expressed -
3 Sobic.004G256000 NOL1/NOP2/sun family protein, putative, expressed K14835: 25S rRNA (cytosine2870-C5)-methyltransferase
4 Sobic.006G010400 tRNA-dihydrouridine synthase 3-like, putative, expressed K05544: tRNA-dihydrouridine synthase 3
5 Sobic.009G249800 AARP2CN domain containing protein, expressed K14799: pre-rRNA-processing protein TSR1
6 Sobic.003G407600 Mak16 protein domain containing protein, expressed K14831: protein MAK16
7 Sobic.004G252000 expressed protein K14545: ribosomal RNA-processing protein 7
8 Sobic.010G247400 Brix domain containing protein, putative, expressed K14561: U3 small nucleolar ribonucleoprotein protein IMP4
9 Sobic.009G045900 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
10 Sobic.004G124100 EMB1303, putative, expressed -
11 Sobic.001G460500 T-complex protein, putative, expressed K09495: CCT3, T-complex protein 1 subunit gamma
12 Sobic.004G017400 expressed protein -
13 Sobic.007G140400 CAF1 family ribonuclease containing protein, putative, expressed K01148: PARN, poly(A)-specific ribonuclease
14 Sobic.001G251600 SET domain protein 123, putative, expressed K11426: [histone H3]-lysine4/36 N-trimethyltransferase SMYD
15 Sobic.007G089800 SET domain containing protein, expressed K19199: protein-histidine N-methyltransferase
16 Sobic.002G112100 - K14811: ATP-dependent RNA helicase DBP3
17 Sobic.004G216400 RAN GTPase-activating protein 1, putative, expressed K14319: Ran GTPase-activating protein 1
18 Sobic.002G086200 - -
19 Sobic.004G310500 ybaK/prolyl-tRNA synthetase family protein, putative, expressed -
20 Sobic.001G468600 seryl-tRNA synthetase, putative, expressed K01875: SARS, seryl-tRNA synthetase


Gene co-expression network
sample Sobic006G269900 Sobic006G269900 Sobic006G084000 Sobic006G084000 Sobic006G269900--Sobic006G084000 Sobic008G160000 Sobic008G160000 Sobic006G269900--Sobic008G160000 Sobic004G256000 Sobic004G256000 Sobic006G269900--Sobic004G256000 Sobic006G010400 Sobic006G010400 Sobic006G269900--Sobic006G010400 Sobic009G249800 Sobic009G249800 Sobic006G269900--Sobic009G249800 Sobic003G407600 Sobic003G407600 Sobic006G269900--Sobic003G407600 Sobic004G252000 Sobic004G252000 Sobic006G269900--Sobic004G252000 Sobic010G247400 Sobic010G247400 Sobic006G269900--Sobic010G247400 Sobic009G045900 Sobic009G045900 Sobic006G269900--Sobic009G045900 Sobic006G084000--Sobic006G269900 Sobic006G084000--Sobic008G160000 Sobic006G084000--Sobic006G010400 Sobic006G084000--Sobic003G407600 Sobic004G224600 Sobic004G224600 Sobic006G084000--Sobic004G224600 Sobic001G259000 Sobic001G259000 Sobic006G084000--Sobic001G259000 Sobic003G382500 Sobic003G382500 Sobic006G084000--Sobic003G382500 Sobic006G084000--Sobic010G247400 Sobic009G246500 Sobic009G246500 Sobic006G084000--Sobic009G246500 Sobic004G340400 Sobic004G340400 Sobic008G160000--Sobic004G340400 Sobic001G455800 Sobic001G455800 Sobic008G160000--Sobic001G455800 Sobic008G160000--Sobic001G259000 Sobic009G138700 Sobic009G138700 Sobic008G160000--Sobic009G138700 Sobic002G150700 Sobic002G150700 Sobic008G160000--Sobic002G150700 Sobic009G016400 Sobic009G016400 Sobic008G160000--Sobic009G016400 Sobic001G145400 Sobic001G145400 Sobic008G160000--Sobic001G145400 Sobic006G002800 Sobic006G002800 Sobic008G160000--Sobic006G002800 Sobic008G160000--Sobic004G224600 Sobic002G234300 Sobic002G234300 Sobic004G256000--Sobic002G234300 Sobic002G112100 Sobic002G112100 Sobic004G256000--Sobic002G112100 Sobic004G256000--Sobic009G246500 Sobic002G071400 Sobic002G071400 Sobic004G256000--Sobic002G071400 Sobic004G256000--Sobic009G249800 Sobic004G256000--Sobic006G269900 Sobic008G169200 Sobic008G169200 Sobic004G256000--Sobic008G169200 Sobic008G049100 Sobic008G049100 Sobic004G256000--Sobic008G049100 Sobic004G256000--Sobic008G160000 Sobic001G251600 Sobic001G251600 Sobic006G010400--Sobic001G251600 Sobic006G010400--Sobic006G084000 Sobic007G071900 Sobic007G071900 Sobic006G010400--Sobic007G071900 Sobic001G537500 Sobic001G537500 Sobic006G010400--Sobic001G537500 Sobic006G010400--Sobic009G249800 Sobic007G140400 Sobic007G140400 Sobic006G010400--Sobic007G140400 Sobic008G051200 Sobic008G051200 Sobic006G010400--Sobic008G051200 Sobic004G257100 Sobic004G257100 Sobic006G010400--Sobic004G257100 Sobic001G460500 Sobic001G460500 Sobic006G010400--Sobic001G460500 Sobic002G408900 Sobic002G408900 Sobic009G249800--Sobic002G408900 Sobic004G208500 Sobic004G208500 Sobic009G249800--Sobic004G208500 Sobic009G249800--Sobic001G251600 Sobic002G246700 Sobic002G246700 Sobic009G249800--Sobic002G246700 Sobic002G295900 Sobic002G295900 Sobic009G249800--Sobic002G295900 Sobic009G249800--Sobic006G010400 Sobic001G015400 Sobic001G015400 Sobic009G249800--Sobic001G015400 Sobic009G249800--Sobic001G460500 Sobic009G249800--Sobic004G256000 Sobic003G407600--Sobic006G084000 Sobic003G407600--Sobic010G247400 Sobic003G407600--Sobic003G382500 Sobic008G009600 Sobic008G009600 Sobic003G407600--Sobic008G009600 Sobic004G173100 Sobic004G173100 Sobic003G407600--Sobic004G173100 Sobic010G216300 Sobic010G216300 Sobic003G407600--Sobic010G216300 Sobic001G322600 Sobic001G322600 Sobic003G407600--Sobic001G322600 Sobic001G401400 Sobic001G401400 Sobic003G407600--Sobic001G401400 Sobic001G230200 Sobic001G230200 Sobic003G407600--Sobic001G230200 Sobic002G423500 Sobic002G423500 Sobic004G252000--Sobic002G423500 Sobic004G326600 Sobic004G326600 Sobic004G252000--Sobic004G326600 Sobic002G014400 Sobic002G014400 Sobic004G252000--Sobic002G014400 Sobic009G235000 Sobic009G235000 Sobic004G252000--Sobic009G235000 Sobic009G258500 Sobic009G258500 Sobic004G252000--Sobic009G258500 Sobic002G365900 Sobic002G365900 Sobic004G252000--Sobic002G365900 Sobic004G047200 Sobic004G047200 Sobic004G252000--Sobic004G047200 Sobic006G135900 Sobic006G135900 Sobic004G252000--Sobic006G135900 Sobic004G252000--Sobic006G084000 Sobic001G249700 Sobic001G249700 Sobic010G247400--Sobic001G249700 Sobic010G247400--Sobic001G259000 Sobic001G527300 Sobic001G527300 Sobic010G247400--Sobic001G527300 Sobic002G341800 Sobic002G341800 Sobic010G247400--Sobic002G341800 Sobic002G077900 Sobic002G077900 Sobic010G247400--Sobic002G077900 Sobic001G370300 Sobic001G370300 Sobic010G247400--Sobic001G370300 Sobic010G247400--Sobic003G407600 Sobic006G233300 Sobic006G233300 Sobic010G247400--Sobic006G233300 Sobic009G033900 Sobic009G033900 Sobic010G247400--Sobic009G033900 Sobic008G135200 Sobic008G135200 Sobic009G045900--Sobic008G135200 Sobic002G047000 Sobic002G047000 Sobic009G045900--Sobic002G047000 Sobic009G045900--Sobic002G246700 Sobic009G045900--Sobic002G408900 Sobic001G090100 Sobic001G090100 Sobic009G045900--Sobic001G090100 Sobic003G314700 Sobic003G314700 Sobic009G045900--Sobic003G314700 Sobic010G206300 Sobic010G206300 Sobic009G045900--Sobic010G206300 Sobic001G248100 Sobic001G248100 Sobic009G045900--Sobic001G248100 Sobic009G045900--Sobic001G537500
Octagon: transcription factors


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