Gene annotation
Transcriptome id Sobic.002G137601.1
Synonym -
Functional annotation -
UniProt A0A1W0W3V0
Pfam -
Panther DB PTHR12271 PTHR12271:SF62
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G45750 : Nucleotidyltransferase family protein
RAP-DB (Rice) LOC_Os08g44560.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium PNT65208
Barley HORVU4Hr1G000070.48 , HORVU4Hr1G000070.49 , HORVU4Hr1G000070.40 , HORVU4Hr1G000070.41 , HORVU4Hr1G000070.42 , HORVU4Hr1G000070.43 , HORVU4Hr1G000070.44 , HORVU4Hr1G000070.45 , HORVU4Hr1G000070.46 , HORVU4Hr1G000070.47 , HORVU4Hr1G000070.9 , HORVU4Hr1G000070.8 , HORVU4Hr1G000070.7 , HORVU4Hr1G000070.5 , HORVU4Hr1G000070.4 , HORVU4Hr1G000070.3 , HORVU4Hr1G000070.2 , HORVU4Hr1G000070.1 , HORVU4Hr1G000070.60 , HORVU4Hr1G000070.17 , HORVU4Hr1G000070.16 , HORVU4Hr1G000070.15 , HORVU4Hr1G000070.14 , HORVU4Hr1G000070.13 , HORVU4Hr1G000070.12 , HORVU4Hr1G000070.11 , HORVU4Hr1G000070.10 , HORVU4Hr1G000070.19 , HORVU4Hr1G000070.18 , HORVU4Hr1G000070.39 , HORVU4Hr1G000070.38 , HORVU4Hr1G000070.31 , HORVU4Hr1G000070.30 , HORVU4Hr1G000070.33 , HORVU4Hr1G000070.32 , HORVU4Hr1G000070.35 , HORVU4Hr1G000070.34 , HORVU4Hr1G000070.37 , HORVU4Hr1G000070.36 , HORVU4Hr1G000070.59 , HORVU4Hr1G000070.58 , HORVU4Hr1G000070.53 , HORVU4Hr1G000070.52 , HORVU4Hr1G000070.51 , HORVU4Hr1G000070.50 , HORVU4Hr1G000070.57 , HORVU4Hr1G000070.56 , HORVU4Hr1G000070.55 , HORVU4Hr1G000070.54 , HORVU4Hr1G000070.28 , HORVU4Hr1G000070.29 , HORVU4Hr1G000070.26 , HORVU4Hr1G000070.27 , HORVU4Hr1G000070.24 , HORVU4Hr1G000070.25 , HORVU4Hr1G000070.22 , HORVU4Hr1G000070.23 , HORVU4Hr1G000070.20 , HORVU4Hr1G000070.21
Wheat TraesCS4A02G311100 , TraesCS4A02G311100 , TraesCS4B02G003200
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G356200 expressed protein -
2 Sobic.002G412700 histone-arginine methyltransferase CARM1, putative, expressed K05931: CARM1, type I protein arginine methyltransferase
3 Sobic.006G100800 expressed protein -
4 Sobic.007G047600 expressed protein -
5 Sobic.010G099800 growth regulator related protein, putative, expressed -
6 Sobic.003G016500 histone-lysine N-methyltransferase ATX5, putative, expressed -
7 Sobic.001G533100 GHMP kinases ATP-binding protein, putative, expressed K05305: fucokinase
8 Sobic.003G209400 expressed protein -
9 Sobic.001G248100 histone acetyltransferase GCN5, putative, expressed K06062: PCAF, KAT2, histone acetyltransferase
10 Sobic.002G119600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
11 Sobic.006G208400 expressed protein K14318: nuclear pore complex protein Nup88
12 Sobic.004G354000 OsSigP1 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/His catalytic dyad, expressed -
13 Sobic.003G173400 tetratricopeptide repeat protein 5, putative, expressed -
14 Sobic.002G364900 PPR repeat domain containing protein, putative, expressed -
15 Sobic.010G070600 DNA binding protein, putative, expressed -
16 Sobic.004G106250 - -
17 Sobic.010G139500 phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
18 Sobic.008G088842 - -
19 Sobic.003G135500 sugar transporter superfamily, putative, expressed -
20 Sobic.008G123300 AAA-type ATPase family protein, putative, expressed -


Gene co-expression network
sample Sobic002G137601 Sobic002G137601 Sobic004G356200 Sobic004G356200 Sobic002G137601--Sobic004G356200 Sobic002G412700 Sobic002G412700 Sobic002G137601--Sobic002G412700 Sobic006G100800 Sobic006G100800 Sobic002G137601--Sobic006G100800 Sobic007G047600 Sobic007G047600 Sobic002G137601--Sobic007G047600 Sobic010G099800 Sobic010G099800 Sobic002G137601--Sobic010G099800 Sobic003G016500 Sobic003G016500 Sobic002G137601--Sobic003G016500 Sobic001G533100 Sobic001G533100 Sobic002G137601--Sobic001G533100 Sobic003G209400 Sobic003G209400 Sobic002G137601--Sobic003G209400 Sobic001G248100 Sobic001G248100 Sobic002G137601--Sobic001G248100 Sobic001G200200 Sobic001G200200 Sobic004G356200--Sobic001G200200 Sobic002G371600 Sobic002G371600 Sobic004G356200--Sobic002G371600 Sobic005G031000 Sobic005G031000 Sobic004G356200--Sobic005G031000 Sobic004G356200--Sobic001G248100 Sobic004G356200--Sobic002G137601 Sobic002G160700 Sobic002G160700 Sobic004G356200--Sobic002G160700 Sobic004G356200--Sobic007G047600 Sobic004G030400 Sobic004G030400 Sobic004G356200--Sobic004G030400 Sobic001G085800 Sobic001G085800 Sobic004G356200--Sobic001G085800 Sobic002G412700--Sobic001G248100 Sobic003G405500 Sobic003G405500 Sobic002G412700--Sobic003G405500 Sobic003G314700 Sobic003G314700 Sobic002G412700--Sobic003G314700 Sobic004G034700 Sobic004G034700 Sobic002G412700--Sobic004G034700 Sobic002G412700--Sobic003G209400 Sobic002G412700--Sobic007G047600 Sobic010G085200 Sobic010G085200 Sobic002G412700--Sobic010G085200 Sobic002G119600 Sobic002G119600 Sobic002G412700--Sobic002G119600 Sobic010G139500 Sobic010G139500 Sobic002G412700--Sobic010G139500 Sobic006G100800--Sobic010G099800 Sobic006G100800--Sobic004G356200 Sobic006G100800--Sobic007G047600 Sobic006G100800--Sobic002G137601 Sobic006G100800--Sobic002G412700 Sobic006G100800--Sobic001G248100 Sobic006G100800--Sobic003G016500 Sobic007G016900 Sobic007G016900 Sobic006G100800--Sobic007G016900 Sobic007G145400 Sobic007G145400 Sobic006G100800--Sobic007G145400 Sobic007G047600--Sobic002G412700 Sobic007G047600--Sobic007G145400 Sobic008G092800 Sobic008G092800 Sobic007G047600--Sobic008G092800 Sobic007G047600--Sobic004G356200 Sobic003G360300 Sobic003G360300 Sobic007G047600--Sobic003G360300 Sobic008G080500 Sobic008G080500 Sobic007G047600--Sobic008G080500 Sobic006G280100 Sobic006G280100 Sobic007G047600--Sobic006G280100 Sobic007G047600--Sobic002G119600 Sobic001G467100 Sobic001G467100 Sobic007G047600--Sobic001G467100 Sobic001G393700 Sobic001G393700 Sobic010G099800--Sobic001G393700 Sobic003G240700 Sobic003G240700 Sobic010G099800--Sobic003G240700 Sobic001G474400 Sobic001G474400 Sobic010G099800--Sobic001G474400 Sobic009G045200 Sobic009G045200 Sobic010G099800--Sobic009G045200 Sobic010G099800--Sobic003G405500 Sobic010G278600 Sobic010G278600 Sobic010G099800--Sobic010G278600 Sobic001G335900 Sobic001G335900 Sobic010G099800--Sobic001G335900 Sobic001G051700 Sobic001G051700 Sobic010G099800--Sobic001G051700 Sobic002G430300 Sobic002G430300 Sobic010G099800--Sobic002G430300 Sobic010G070600 Sobic010G070600 Sobic003G016500--Sobic010G070600 Sobic003G299500 Sobic003G299500 Sobic003G016500--Sobic003G299500 Sobic003G016500--Sobic008G092800 Sobic003G016500--Sobic008G080500 Sobic003G016500--Sobic002G119600 Sobic007G034200 Sobic007G034200 Sobic003G016500--Sobic007G034200 Sobic003G124600 Sobic003G124600 Sobic003G016500--Sobic003G124600 Sobic004G106250 Sobic004G106250 Sobic003G016500--Sobic004G106250 Sobic008G140700 Sobic008G140700 Sobic003G016500--Sobic008G140700 Sobic002G125800 Sobic002G125800 Sobic001G533100--Sobic002G125800 Sobic001G533100--Sobic005G031000 Sobic004G034300 Sobic004G034300 Sobic001G533100--Sobic004G034300 Sobic004G336300 Sobic004G336300 Sobic001G533100--Sobic004G336300 Sobic003G130900 Sobic003G130900 Sobic001G533100--Sobic003G130900 Sobic002G426100 Sobic002G426100 Sobic001G533100--Sobic002G426100 Sobic005G129201 Sobic005G129201 Sobic001G533100--Sobic005G129201 Sobic007G173000 Sobic007G173000 Sobic001G533100--Sobic007G173000 Sobic003G005900 Sobic003G005900 Sobic001G533100--Sobic003G005900 Sobic009G007700 Sobic009G007700 Sobic003G209400--Sobic009G007700 Sobic003G209400--Sobic002G412700 Sobic006G112700 Sobic006G112700 Sobic003G209400--Sobic006G112700 Sobic003G209400--Sobic010G085200 Sobic003G209400--Sobic008G080500 Sobic007G097400 Sobic007G097400 Sobic003G209400--Sobic007G097400 Sobic003G209400--Sobic004G034700 Sobic008G017100 Sobic008G017100 Sobic003G209400--Sobic008G017100 Sobic002G356600 Sobic002G356600 Sobic003G209400--Sobic002G356600 Sobic001G248100--Sobic002G412700 Sobic010G000800 Sobic010G000800 Sobic001G248100--Sobic010G000800 Sobic001G248100--Sobic007G145400 Sobic005G115500 Sobic005G115500 Sobic001G248100--Sobic005G115500 Sobic010G262100 Sobic010G262100 Sobic001G248100--Sobic010G262100 Sobic006G261400 Sobic006G261400 Sobic001G248100--Sobic006G261400 Sobic001G248100--Sobic002G160700 Sobic004G155600 Sobic004G155600 Sobic001G248100--Sobic004G155600 Sobic001G248100--Sobic003G405500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.