Gene annotation
Transcriptome id Sobic.002G143100.1
Synonym
Functional annotation -
UniProt A0A1B6QB74
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G146600 cyclin-dependent kinase F-1, putative, expressed -
2 Sobic.001G057200 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
3 Sobic.009G129500 cyclin, putative, expressed -
4 Sobic.010G242900 disease resistance protein RGA3, putative, expressed -
5 Sobic.010G019800 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.001G131100 expressed protein -
7 Sobic.002G301500 amidase, putative, expressed K01426: E3.5.1.4, amidase
8 Sobic.010G249300 Ser/Thr protein phosphatase family protein, putative, expressed -
9 Sobic.003G119400 PUR ALPHA-1, putative, expressed -
10 Sobic.009G024600 "RSR1(Ortholog in rice:Fu and Xue, 2010)"(PubMedID : 31659916)@"AP2-like TF, coexpress with genes associated with the hormonesignaling pathway, floral development in Arabidopsis"(PubMedID : 28944535)@AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
11 Sobic.004G272300 expressed protein -
12 Sobic.003G154700 stripe rust resistance protein Yr10, putative, expressed -
13 Sobic.002G259400 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
14 Sobic.009G102300 hydrolase, acting on glycosyl bonds, putative, expressed K01227: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
15 Sobic.010G084000 OsPOP13 - Putative Prolyl Oligopeptidase homologue, expressed -
16 Sobic.001G129300 ribosomal L18p/L5e family protein, putative, expressed -
17 Sobic.002G317300 CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
18 Sobic.002G143000 ubiquitin family protein, putative, expressed -
19 Sobic.006G177300 ATFUC1, putative, expressed K01206: alpha-L-fucosidase
20 Sobic.001G528300 heavy metal-associated domain containing protein, expressed -


Gene co-expression network
sample Sobic002G143100 Sobic002G143100 Sobic010G146600 Sobic010G146600 Sobic002G143100--Sobic010G146600 Sobic001G057200 Sobic001G057200 Sobic002G143100--Sobic001G057200 Sobic009G129500 Sobic009G129500 Sobic002G143100--Sobic009G129500 Sobic010G242900 Sobic010G242900 Sobic002G143100--Sobic010G242900 Sobic010G019800 Sobic010G019800 Sobic002G143100--Sobic010G019800 Sobic001G131100 Sobic001G131100 Sobic002G143100--Sobic001G131100 Sobic002G301500 Sobic002G301500 Sobic002G143100--Sobic002G301500 Sobic010G249300 Sobic010G249300 Sobic002G143100--Sobic010G249300 Sobic003G119400 Sobic003G119400 Sobic002G143100--Sobic003G119400 Sobic010G146600--Sobic010G249300 Sobic010G146600--Sobic003G119400 Sobic004G185600 Sobic004G185600 Sobic010G146600--Sobic004G185600 Sobic003G250500 Sobic003G250500 Sobic010G146600--Sobic003G250500 Sobic002G317300 Sobic002G317300 Sobic010G146600--Sobic002G317300 Sobic001G291100 Sobic001G291100 Sobic010G146600--Sobic001G291100 Sobic001G281600 Sobic001G281600 Sobic010G146600--Sobic001G281600 Sobic009G133400 Sobic009G133400 Sobic010G146600--Sobic009G133400 Sobic010G251100 Sobic010G251100 Sobic010G146600--Sobic010G251100 Sobic001G057200--Sobic010G146600 Sobic001G057200--Sobic002G317300 Sobic002G092300 Sobic002G092300 Sobic001G057200--Sobic002G092300 Sobic001G057200--Sobic010G249300 Sobic003G372000 Sobic003G372000 Sobic001G057200--Sobic003G372000 Sobic006G047100 Sobic006G047100 Sobic001G057200--Sobic006G047100 Sobic005G044800 Sobic005G044800 Sobic001G057200--Sobic005G044800 Sobic002G143000 Sobic002G143000 Sobic001G057200--Sobic002G143000 Sobic006G264500 Sobic006G264500 Sobic001G057200--Sobic006G264500 Sobic009G024600 Sobic009G024600 Sobic009G129500--Sobic009G024600 Sobic009G129500--Sobic001G131100 Sobic009G117000 Sobic009G117000 Sobic009G129500--Sobic009G117000 Sobic001G445000 Sobic001G445000 Sobic009G129500--Sobic001G445000 Sobic001G129300 Sobic001G129300 Sobic009G129500--Sobic001G129300 Sobic008G058300 Sobic008G058300 Sobic009G129500--Sobic008G058300 Sobic001G349500 Sobic001G349500 Sobic009G129500--Sobic001G349500 Sobic002G278300 Sobic002G278300 Sobic009G129500--Sobic002G278300 Sobic003G181600 Sobic003G181600 Sobic009G129500--Sobic003G181600 Sobic001G215900 Sobic001G215900 Sobic010G242900--Sobic001G215900 Sobic004G134100 Sobic004G134100 Sobic010G242900--Sobic004G134100 Sobic002G168600 Sobic002G168600 Sobic010G242900--Sobic002G168600 Sobic009G013700 Sobic009G013700 Sobic010G242900--Sobic009G013700 Sobic010G138500 Sobic010G138500 Sobic010G242900--Sobic010G138500 Sobic001G366800 Sobic001G366800 Sobic010G242900--Sobic001G366800 Sobic006G130501 Sobic006G130501 Sobic010G242900--Sobic006G130501 Sobic004G247300 Sobic004G247300 Sobic010G242900--Sobic004G247300 Sobic006G098200 Sobic006G098200 Sobic010G242900--Sobic006G098200 Sobic010G084000 Sobic010G084000 Sobic010G019800--Sobic010G084000 Sobic010G256800 Sobic010G256800 Sobic010G019800--Sobic010G256800 Sobic010G019800--Sobic002G301500 Sobic005G129400 Sobic005G129400 Sobic010G019800--Sobic005G129400 Sobic010G021000 Sobic010G021000 Sobic010G019800--Sobic010G021000 Sobic010G123400 Sobic010G123400 Sobic010G019800--Sobic010G123400 Sobic010G019800--Sobic001G057200 Sobic001G123000 Sobic001G123000 Sobic010G019800--Sobic001G123000 Sobic001G540100 Sobic001G540100 Sobic010G019800--Sobic001G540100 Sobic001G131100--Sobic009G129500 Sobic002G303700 Sobic002G303700 Sobic001G131100--Sobic002G303700 Sobic010G122800 Sobic010G122800 Sobic001G131100--Sobic010G122800 Sobic001G131100--Sobic009G024600 Sobic006G014000 Sobic006G014000 Sobic001G131100--Sobic006G014000 Sobic009G102300 Sobic009G102300 Sobic001G131100--Sobic009G102300 Sobic005G000100 Sobic005G000100 Sobic001G131100--Sobic005G000100 Sobic001G131100--Sobic001G445000 Sobic002G392800 Sobic002G392800 Sobic001G131100--Sobic002G392800 Sobic002G301500--Sobic010G256800 Sobic002G301500--Sobic010G021000 Sobic010G256932 Sobic010G256932 Sobic002G301500--Sobic010G256932 Sobic001G389800 Sobic001G389800 Sobic002G301500--Sobic001G389800 Sobic010G106900 Sobic010G106900 Sobic002G301500--Sobic010G106900 Sobic002G301500--Sobic010G084000 Sobic002G301500--Sobic001G366800 Sobic002G301500--Sobic010G249300 Sobic007G203500 Sobic007G203500 Sobic002G301500--Sobic007G203500 Sobic010G249300--Sobic004G185600 Sobic010G249300--Sobic010G146600 Sobic010G249300--Sobic002G317300 Sobic008G083000 Sobic008G083000 Sobic010G249300--Sobic008G083000 Sobic010G249300--Sobic001G291100 Sobic010G249300--Sobic001G281600 Sobic010G249300--Sobic006G047100 Sobic001G464100 Sobic001G464100 Sobic010G249300--Sobic001G464100 Sobic009G050900 Sobic009G050900 Sobic010G249300--Sobic009G050900 Sobic004G074300 Sobic004G074300 Sobic003G119400--Sobic004G074300 Sobic001G041200 Sobic001G041200 Sobic003G119400--Sobic001G041200 Sobic002G259400 Sobic002G259400 Sobic003G119400--Sobic002G259400 Sobic003G119400--Sobic010G146600 Sobic006G216000 Sobic006G216000 Sobic003G119400--Sobic006G216000 Sobic006G272200 Sobic006G272200 Sobic003G119400--Sobic006G272200 Sobic006G242300 Sobic006G242300 Sobic003G119400--Sobic006G242300 Sobic002G268400 Sobic002G268400 Sobic003G119400--Sobic002G268400 Sobic002G306400 Sobic002G306400 Sobic003G119400--Sobic002G306400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.