Gene annotation
Transcriptome id Sobic.002G219366.1
Synonym -
Functional annotation -
UniProt A0A1W0W5B6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G272100 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
2 Sobic.005G165500 OsSub17 - Putative Subtilisin homologue, expressed -
3 Sobic.010G201700 GA16396-PA, putative, expressed -
4 Sobic.001G519800 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K05298: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating)
5 Sobic.004G035500 -(PubMedID : 26976818)@Involved in photorespiratory pathway(PubMedID : 12887583)@dicarboxylate transporter 3(PubMedID : 27016024)@citrate transporter, putative, expressed K03319: divalent anion:Na+ symporter, DASS family
6 Sobic.004G308700 photosystem I light harvesting complex gene 5(PubMedID : 26465154)@chlorophyll A-B binding protein, putative, expressed K08911: light-harvesting complex I chlorophyll a/b binding protein 5
7 Sobic.003G387800 unknown(PubMedID : 29017446)@rhodanese-like domain containing protein, putative, expressed -
8 Sobic.003G234200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
9 Sobic.002G051100 Probable ribose-5-phosphate isomerase(PubMedID : 26186930)@ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A
10 Sobic.003G002300 Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@-(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@DUF250 domain containing protein, putative, expressed K15283: solute carrier family 35, member E1
11 Sobic.007G207800 thylakoid lumen protein, chloroplast precursor, putative, expressed -
12 Sobic.007G004800 Ferredoxin-1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
13 Sobic.003G359100 sedoheptulose-bisphosphatase(PubMedID : 26465154)@fructose-1,6-bisphosphatase, putative, expressed K01100: sedoheptulose-bisphosphatase
14 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
15 Sobic.006G147300 -(PubMedID : 26465154)@expressed protein -
16 Sobic.008G066100 3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative, expressed -
17 Sobic.001G425400 high cyclic electron flow 1(PubMedID : 26465154)@"D-fructose-1,6-bisphosphate 1-phosphohydrolase (Os)"(PubMedID : 27208977)@fructose-1,6-bisphosphatase, putative, expressed K03841: FBP, fructose-1,6-bisphosphatase I
18 Sobic.004G175500 OsAPx8 - Thylakoid-bound Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
19 Sobic.004G283100 -(PubMedID : 26465154)@expressed protein -
20 Sobic.008G021300 Unnamed(PubMedID : 24676859)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G219366 Sobic002G219366 Sobic004G272100 Sobic004G272100 Sobic002G219366--Sobic004G272100 Sobic005G165500 Sobic005G165500 Sobic002G219366--Sobic005G165500 Sobic010G201700 Sobic010G201700 Sobic002G219366--Sobic010G201700 Sobic001G519800 Sobic001G519800 Sobic002G219366--Sobic001G519800 Sobic004G035500 Sobic004G035500 Sobic002G219366--Sobic004G035500 Sobic004G308700 Sobic004G308700 Sobic002G219366--Sobic004G308700 Sobic003G387800 Sobic003G387800 Sobic002G219366--Sobic003G387800 Sobic003G234200 Sobic003G234200 Sobic002G219366--Sobic003G234200 Sobic002G051100 Sobic002G051100 Sobic002G219366--Sobic002G051100 Sobic004G272100--Sobic004G308700 Sobic004G272100--Sobic010G201700 Sobic004G272100--Sobic001G519800 Sobic004G272100--Sobic002G051100 Sobic003G002300 Sobic003G002300 Sobic004G272100--Sobic003G002300 Sobic008G102000 Sobic008G102000 Sobic004G272100--Sobic008G102000 Sobic009G043000 Sobic009G043000 Sobic004G272100--Sobic009G043000 Sobic001G102800 Sobic001G102800 Sobic004G272100--Sobic001G102800 Sobic008G066100 Sobic008G066100 Sobic004G272100--Sobic008G066100 Sobic004G305800 Sobic004G305800 Sobic005G165500--Sobic004G305800 Sobic003G431900 Sobic003G431900 Sobic005G165500--Sobic003G431900 Sobic008G053200 Sobic008G053200 Sobic005G165500--Sobic008G053200 Sobic005G165500--Sobic003G234200 Sobic009G129300 Sobic009G129300 Sobic005G165500--Sobic009G129300 Sobic007G034300 Sobic007G034300 Sobic005G165500--Sobic007G034300 Sobic005G165500--Sobic010G201700 Sobic003G398800 Sobic003G398800 Sobic005G165500--Sobic003G398800 Sobic005G165500--Sobic004G272100 Sobic010G201700--Sobic009G043000 Sobic010G201700--Sobic004G272100 Sobic010G201700--Sobic003G002300 Sobic010G201700--Sobic001G102800 Sobic010G201700--Sobic001G519800 Sobic007G225500 Sobic007G225500 Sobic010G201700--Sobic007G225500 Sobic010G201700--Sobic008G102000 Sobic006G207800 Sobic006G207800 Sobic010G201700--Sobic006G207800 Sobic010G201700--Sobic004G308700 Sobic001G519800--Sobic004G272100 Sobic001G519800--Sobic001G102800 Sobic001G519800--Sobic003G002300 Sobic001G519800--Sobic002G051100 Sobic003G431700 Sobic003G431700 Sobic001G519800--Sobic003G431700 Sobic001G519800--Sobic010G201700 Sobic001G519800--Sobic004G308700 Sobic007G004800 Sobic007G004800 Sobic001G519800--Sobic007G004800 Sobic001G519800--Sobic008G053200 Sobic003G359100 Sobic003G359100 Sobic004G035500--Sobic003G359100 Sobic008G134800 Sobic008G134800 Sobic004G035500--Sobic008G134800 Sobic007G071500 Sobic007G071500 Sobic004G035500--Sobic007G071500 Sobic004G249800 Sobic004G249800 Sobic004G035500--Sobic004G249800 Sobic004G035500--Sobic008G066100 Sobic008G021300 Sobic008G021300 Sobic004G035500--Sobic008G021300 Sobic007G207800 Sobic007G207800 Sobic004G035500--Sobic007G207800 Sobic004G035500--Sobic004G272100 Sobic006G105900 Sobic006G105900 Sobic004G035500--Sobic006G105900 Sobic004G308700--Sobic004G272100 Sobic004G308700--Sobic008G066100 Sobic004G308700--Sobic001G519800 Sobic004G308700--Sobic010G201700 Sobic001G425400 Sobic001G425400 Sobic004G308700--Sobic001G425400 Sobic004G308700--Sobic003G431700 Sobic004G308700--Sobic001G102800 Sobic004G308700--Sobic007G004800 Sobic004G308700--Sobic002G051100 Sobic004G175500 Sobic004G175500 Sobic003G387800--Sobic004G175500 Sobic003G387800--Sobic007G004800 Sobic003G387800--Sobic003G002300 Sobic009G140600 Sobic009G140600 Sobic003G387800--Sobic009G140600 Sobic010G005500 Sobic010G005500 Sobic003G387800--Sobic010G005500 Sobic009G030900 Sobic009G030900 Sobic003G387800--Sobic009G030900 Sobic007G052400 Sobic007G052400 Sobic003G387800--Sobic007G052400 Sobic009G143100 Sobic009G143100 Sobic003G387800--Sobic009G143100 Sobic003G387800--Sobic008G134800 Sobic003G234200--Sobic003G431900 Sobic003G234200--Sobic008G053200 Sobic002G324500 Sobic002G324500 Sobic003G234200--Sobic002G324500 Sobic001G329400 Sobic001G329400 Sobic003G234200--Sobic001G329400 Sobic003G234200--Sobic005G165500 Sobic003G367500 Sobic003G367500 Sobic003G234200--Sobic003G367500 Sobic006G244000 Sobic006G244000 Sobic003G234200--Sobic006G244000 Sobic003G234200--Sobic001G519800 Sobic003G234200--Sobic009G129300 Sobic002G051100--Sobic003G002300 Sobic002G051100--Sobic001G519800 Sobic002G051100--Sobic004G272100 Sobic002G051100--Sobic008G102000 Sobic001G489000 Sobic001G489000 Sobic002G051100--Sobic001G489000 Sobic002G051100--Sobic009G140600 Sobic002G051100--Sobic010G201700 Sobic002G051100--Sobic003G387800 Sobic002G051100--Sobic007G004800
Octagon: transcription factors


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