Gene annotation
Transcriptome id Sobic.002G258400.1,Sobic.002G258400.2
Synonym
Functional annotation Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed
UniProt A0A1B6QDI3 , A0A1W0W5V2
Pfam PF13847 PF01593 PF13847
Panther DB PTHR10108:SF916 PTHR10108 PTHR10108 PTHR10108:SF916
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G23510 : Cyclopropane-fatty-acyl-phospholipid synthase
RAP-DB (Rice) LOC_Os12g16650.1,LOC_Os12g16650.2 : Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed
MaizeGDB (Corn) Zm00025a014310
Brachypodium KQJ81718 , KQJ81717
Barley HORVU2Hr1G007070.28 , HORVU2Hr1G007070.23 , HORVU2Hr1G007070.22 , HORVU2Hr1G007070.21 , HORVU2Hr1G007070.20 , HORVU2Hr1G007070.27 , HORVU2Hr1G007070.26 , HORVU2Hr1G007070.24 , HORVU2Hr1G012700.1 , HORVU2Hr1G012700.2 , HORVU2Hr1G012700.3 , HORVU2Hr1G122110.28 , HORVU2Hr1G122110.29 , HORVU2Hr1G122110.27 , HORVU2Hr1G122110.1 , HORVU2Hr1G122110.3 , HORVU2Hr1G122110.2 , HORVU2Hr1G122110.5 , HORVU2Hr1G122110.4 , HORVU2Hr1G122110.7 , HORVU2Hr1G122110.6 , HORVU2Hr1G122110.24 , HORVU2Hr1G122110.8 , HORVU2Hr1G007070.30 , HORVU2Hr1G007070.35 , HORVU2Hr1G007070.37 , HORVU2Hr1G007070.1 , HORVU2Hr1G007070.2 , HORVU2Hr1G007070.3 , HORVU2Hr1G007070.4 , HORVU2Hr1G007070.5 , HORVU2Hr1G007070.6 , HORVU2Hr1G007070.7 , HORVU2Hr1G122110.18 , HORVU2Hr1G122110.15 , HORVU2Hr1G122110.14 , HORVU2Hr1G122110.17 , HORVU2Hr1G122110.16 , HORVU2Hr1G122110.13 , HORVU2Hr1G122110.59 , HORVU2Hr1G122110.58 , HORVU2Hr1G122110.50 , HORVU2Hr1G122110.53 , HORVU2Hr1G122110.55 , HORVU2Hr1G122110.54 , HORVU2Hr1G122110.57 , HORVU2Hr1G122040.2 , HORVU2Hr1G122040.1 , HORVU2Hr1G007030.1 , HORVU2Hr1G122110.9 , HORVU2Hr1G122110.48 , HORVU2Hr1G122110.49 , HORVU2Hr1G122110.46 , HORVU2Hr1G122110.47 , HORVU2Hr1G122110.44 , HORVU2Hr1G122110.42 , HORVU2Hr1G122110.43 , HORVU2Hr1G122110.41 , HORVU2Hr1G122180.7 , HORVU2Hr1G122180.4 , HORVU2Hr1G122180.5 , HORVU2Hr1G122110.32 , HORVU2Hr1G122110.31 , HORVU2Hr1G122110.30 , HORVU2Hr1G122110.35 , HORVU2Hr1G007070.11 , HORVU2Hr1G007070.18 , HORVU2Hr1G007070.19
Wheat TraesCS2A02G545100 , TraesCS2D02G053200 , TraesCS2B02G067300 , TraesCS2B02G067300 , TraesCS2B02G067300 , TraesCS2A02G046100 , TraesCS2B02G575600 , TraesCS2B02G575600 , TraesCS2D02G545500 , TraesCS2D02G545500 , TraesCS2B02G575100 , TraesCS2B02G575100 , TraesCS2B02G575100 , TraesCS2A02G545100 , TraesCS2A02G545100 , TraesCS2A02G545100 , TraesCS2A02G545100 , TraesCSU02G022800 , TraesCS2A02G544500 , TraesCS2A02G544500 , TraesCS2A02G544500 , TraesCS2A02G544500 , TraesCS2A02G544500 , TraesCS2A02G544800 , TraesCS2A02G544800 , TraesCS2A02G544800 , TraesCS2A02G544800 , TraesCS2A02G544800 , TraesCS2B02G058200 , TraesCS2B02G574800 , TraesCS2B02G574800 , TraesCS2A02G544800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G277400 violaxanthin de-epoxidase, putative, expressed -
2 Sobic.009G123300 NAD dependent epimerase/dehydratase family protein, putative, expressed K06118: SQD1, UDP-sulfoquinovose synthase
3 Sobic.004G154800 expressed protein -
4 Sobic.003G185600 asp/Glu racemase, putative, expressed -
5 Sobic.006G108200 expressed protein -
6 Sobic.003G275200 methyltransferase domain containing protein, expressed -
7 Sobic.008G088821 - K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
8 Sobic.007G010800 similar to Os01g0104100 protein(PubMedID : 29862293)@expressed protein -
9 Sobic.001G220000 PPR repeat containing protein, expressed -
10 Sobic.002G351600 prenyltransferase, putative, expressed K12501: homogentisate solanesyltransferase
11 Sobic.006G270200 smr domain containing protein, expressed K07456: DNA mismatch repair protein MutS2
12 Sobic.004G055000 peptidase, cysteine peptidase active site, putative, expressed -
13 Sobic.004G028300 expressed protein -
14 Sobic.008G002400 expressed protein -
15 Sobic.004G326500 PAP fibrillin family domain containing protein, expressed -
16 Sobic.001G350000 expressed protein -
17 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
18 Sobic.002G356900 threonyl-tRNA synthetase, putative, expressed K01868: TARS, threonyl-tRNA synthetase
19 Sobic.001G167900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
20 Sobic.005G134100 rubredoxin family protein, putative, expressed -


Gene co-expression network
sample Sobic002G258400 Sobic002G258400 Sobic003G277400 Sobic003G277400 Sobic002G258400--Sobic003G277400 Sobic009G123300 Sobic009G123300 Sobic002G258400--Sobic009G123300 Sobic004G154800 Sobic004G154800 Sobic002G258400--Sobic004G154800 Sobic003G185600 Sobic003G185600 Sobic002G258400--Sobic003G185600 Sobic006G108200 Sobic006G108200 Sobic002G258400--Sobic006G108200 Sobic003G275200 Sobic003G275200 Sobic002G258400--Sobic003G275200 Sobic008G088821 Sobic008G088821 Sobic002G258400--Sobic008G088821 Sobic007G010800 Sobic007G010800 Sobic002G258400--Sobic007G010800 Sobic001G220000 Sobic001G220000 Sobic002G258400--Sobic001G220000 Sobic003G277400--Sobic007G010800 Sobic009G040400 Sobic009G040400 Sobic003G277400--Sobic009G040400 Sobic004G154700 Sobic004G154700 Sobic003G277400--Sobic004G154700 Sobic003G277400--Sobic002G258400 Sobic003G277400--Sobic004G154800 Sobic003G277400--Sobic001G220000 Sobic003G277400--Sobic003G185600 Sobic003G277400--Sobic006G108200 Sobic002G356900 Sobic002G356900 Sobic003G277400--Sobic002G356900 Sobic009G123300--Sobic002G356900 Sobic007G016600 Sobic007G016600 Sobic009G123300--Sobic007G016600 Sobic004G268400 Sobic004G268400 Sobic009G123300--Sobic004G268400 Sobic009G123300--Sobic008G088821 Sobic001G018000 Sobic001G018000 Sobic009G123300--Sobic001G018000 Sobic004G300100 Sobic004G300100 Sobic009G123300--Sobic004G300100 Sobic004G267700 Sobic004G267700 Sobic009G123300--Sobic004G267700 Sobic003G380200 Sobic003G380200 Sobic009G123300--Sobic003G380200 Sobic003G304300 Sobic003G304300 Sobic009G123300--Sobic003G304300 Sobic004G055000 Sobic004G055000 Sobic004G154800--Sobic004G055000 Sobic004G154800--Sobic003G275200 Sobic001G167900 Sobic001G167900 Sobic004G154800--Sobic001G167900 Sobic004G154800--Sobic006G108200 Sobic004G124400 Sobic004G124400 Sobic004G154800--Sobic004G124400 Sobic004G028300 Sobic004G028300 Sobic004G154800--Sobic004G028300 Sobic004G154800--Sobic001G220000 Sobic002G351600 Sobic002G351600 Sobic004G154800--Sobic002G351600 Sobic010G062500 Sobic010G062500 Sobic004G154800--Sobic010G062500 Sobic003G185600--Sobic007G010800 Sobic007G087100 Sobic007G087100 Sobic003G185600--Sobic007G087100 Sobic003G185600--Sobic008G088821 Sobic003G185600--Sobic001G220000 Sobic005G028800 Sobic005G028800 Sobic003G185600--Sobic005G028800 Sobic001G436400 Sobic001G436400 Sobic003G185600--Sobic001G436400 Sobic003G185600--Sobic002G356900 Sobic001G015200 Sobic001G015200 Sobic003G185600--Sobic001G015200 Sobic003G186800 Sobic003G186800 Sobic003G185600--Sobic003G186800 Sobic006G108200--Sobic003G275200 Sobic006G108200--Sobic002G351600 Sobic006G108200--Sobic004G055000 Sobic006G108200--Sobic004G028300 Sobic006G108200--Sobic004G154800 Sobic002G200900 Sobic002G200900 Sobic006G108200--Sobic002G200900 Sobic006G108200--Sobic001G220000 Sobic006G108200--Sobic001G167900 Sobic005G134100 Sobic005G134100 Sobic006G108200--Sobic005G134100 Sobic003G275200--Sobic004G055000 Sobic003G275200--Sobic006G108200 Sobic004G326500 Sobic004G326500 Sobic003G275200--Sobic004G326500 Sobic003G275200--Sobic004G154800 Sobic008G172700 Sobic008G172700 Sobic003G275200--Sobic008G172700 Sobic003G275200--Sobic002G351600 Sobic001G350000 Sobic001G350000 Sobic003G275200--Sobic001G350000 Sobic008G039600 Sobic008G039600 Sobic003G275200--Sobic008G039600 Sobic002G272100 Sobic002G272100 Sobic003G275200--Sobic002G272100 Sobic008G088821--Sobic001G015200 Sobic006G140500 Sobic006G140500 Sobic008G088821--Sobic006G140500 Sobic008G088821--Sobic004G028300 Sobic009G119300 Sobic009G119300 Sobic008G088821--Sobic009G119300 Sobic003G103300 Sobic003G103300 Sobic008G088821--Sobic003G103300 Sobic008G088821--Sobic001G018000 Sobic008G088821--Sobic004G268400 Sobic010G101000 Sobic010G101000 Sobic008G088821--Sobic010G101000 Sobic002G030900 Sobic002G030900 Sobic008G088821--Sobic002G030900 Sobic007G010800--Sobic002G356900 Sobic007G010800--Sobic001G018000 Sobic010G100900 Sobic010G100900 Sobic007G010800--Sobic010G100900 Sobic007G010800--Sobic009G040400 Sobic002G351200 Sobic002G351200 Sobic007G010800--Sobic002G351200 Sobic003G003450 Sobic003G003450 Sobic007G010800--Sobic003G003450 Sobic007G010800--Sobic004G268400 Sobic004G317700 Sobic004G317700 Sobic007G010800--Sobic004G317700 Sobic007G010800--Sobic003G186800 Sobic001G220000--Sobic004G124400 Sobic001G220000--Sobic004G317700 Sobic001G220000--Sobic004G300100 Sobic001G220000--Sobic006G108200 Sobic001G220000--Sobic002G356900 Sobic010G231500 Sobic010G231500 Sobic001G220000--Sobic010G231500 Sobic001G220000--Sobic001G436400 Sobic001G220000--Sobic004G154800 Sobic001G220000--Sobic002G351600
Octagon: transcription factors


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